| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21242854
Identifier: 21242854
GI number: 21242854
Start: 2476483
End: 2477103
Strand: Reverse
Name: 21242854
Synonym: XAC2119
Alternate gene names: NA
Gene position: 2477103-2476483 (Counterclockwise)
Preceding gene: 21242866
Following gene: 21242851
Centisome position: 47.86
GC content: 63.77
Gene sequence:
>621_bases ATGTGCGTCCATGGGCCAGCATGCTCACCCGCCTCGGCTCGTGCAGTGCCATGCTGGCAGGCCCGTGGATCCGATGGACG GCGCGCGAAGACGCTGACGCTGAAGCAGTGGCTGGCCGAAGACGTGACCGCGGTTTCACCTGAAGGAAGTCGACAAATGC GCGCATCGCTCCAAGGCTACCCGCACCCTCAATCACGCCAGACGATGAACGTCGGCAAGGATGACCTCCATCGCGTCCCT TTACTGCCTCTGGCAGTGCTCGCCGTCATGTCGCTTGGCGGATGCGCCACAACGCCCCGGGCGACGGGTCATCTCATTGA AGGCCCTGTGCGCCTAGGGGAGATTGCGGCGGTCGATGGTCCCAGAGTGCGGCCAGATCGAGTGGTGGAAGACAGCCGCT GCCCTGCCGATGTTCGATGCATCGTGGAAGGTCGACTGATCGTGAGTGCGACGGTCCTGGGTGGCGGATGGTCAAAACAG GTTGACCTCACATTAGGCATCCCGGTCCCGATTGCCGATGGGATATTGACGCTGGTGGATGCCACGCCCCCGCCCATCGC CCCGGAAACCGCCGCACGCGCTGCGGCACGCTTCACCTTCACATTCCAAGGCGGTCGCTAG
Upstream 100 bases:
>100_bases TCAGCGCCGGCTCCTCCTGAAGTCGCTGCGAGCGCCAGTATCGGGGCGCGACACACCGGTTGGCAATGGAGGAATTACAA TTTGATTATACATAGCGGCG
Downstream 100 bases:
>100_bases TCAAGCAGGCCCTGAAGGCTACGATCCGCATCTTGCGTCAGCGACCACTTCCAGCGGGCTCGAAGTTGCCTGCCCTACTT TCTTTAAATTGCGCTGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MCVHGPACSPASARAVPCWQARGSDGRRAKTLTLKQWLAEDVTAVSPEGSRQMRASLQGYPHPQSRQTMNVGKDDLHRVP LLPLAVLAVMSLGGCATTPRATGHLIEGPVRLGEIAAVDGPRVRPDRVVEDSRCPADVRCIVEGRLIVSATVLGGGWSKQ VDLTLGIPVPIADGILTLVDATPPPIAPETAARAAARFTFTFQGGR
Sequences:
>Translated_206_residues MCVHGPACSPASARAVPCWQARGSDGRRAKTLTLKQWLAEDVTAVSPEGSRQMRASLQGYPHPQSRQTMNVGKDDLHRVP LLPLAVLAVMSLGGCATTPRATGHLIEGPVRLGEIAAVDGPRVRPDRVVEDSRCPADVRCIVEGRLIVSATVLGGGWSKQ VDLTLGIPVPIADGILTLVDATPPPIAPETAARAAARFTFTFQGGR >Mature_206_residues MCVHGPACSPASARAVPCWQARGSDGRRAKTLTLKQWLAEDVTAVSPEGSRQMRASLQGYPHPQSRQTMNVGKDDLHRVP LLPLAVLAVMSLGGCATTPRATGHLIEGPVRLGEIAAVDGPRVRPDRVVEDSRCPADVRCIVEGRLIVSATVLGGGWSKQ VDLTLGIPVPIADGILTLVDATPPPIAPETAARAAARFTFTFQGGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21724; Mature: 21724
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCVHGPACSPASARAVPCWQARGSDGRRAKTLTLKQWLAEDVTAVSPEGSRQMRASLQGY CCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHEECCCCCHHHHHHHHCCC PHPQSRQTMNVGKDDLHRVPLLPLAVLAVMSLGGCATTPRATGHLIEGPVRLGEIAAVDG CCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCEEEECCC PRVRPDRVVEDSRCPADVRCIVEGRLIVSATVLGGGWSKQVDLTLGIPVPIADGILTLVD CCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEECCCCCCEEEEEECCCCCCCCCEEEEEC ATPPPIAPETAARAAARFTFTFQGGR CCCCCCCCHHHHHHEEEEEEEECCCC >Mature Secondary Structure MCVHGPACSPASARAVPCWQARGSDGRRAKTLTLKQWLAEDVTAVSPEGSRQMRASLQGY CCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHEECCCCCHHHHHHHHCCC PHPQSRQTMNVGKDDLHRVPLLPLAVLAVMSLGGCATTPRATGHLIEGPVRLGEIAAVDG CCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCEEEECCC PRVRPDRVVEDSRCPADVRCIVEGRLIVSATVLGGGWSKQVDLTLGIPVPIADGILTLVD CCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEECCCCCCEEEEEECCCCCCCCCEEEEEC ATPPPIAPETAARAAARFTFTFQGGR CCCCCCCCHHHHHHEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA