| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is phhB
Identifier: 21242851
GI number: 21242851
Start: 2473346
End: 2473702
Strand: Reverse
Name: phhB
Synonym: XAC2116
Alternate gene names: 21242851
Gene position: 2473702-2473346 (Counterclockwise)
Preceding gene: 21242854
Following gene: 21242850
Centisome position: 47.8
GC content: 66.67
Gene sequence:
>357_bases ATGACCGATCTGATTCCCCTGGAGCAGGCGCATTGCCTCCCGCGCAAAGGCAGCGACCACAAGCTGGGCGAGGCGCGCCT GGCCGAGCTGCTGCCGCAGGTGCCCGGCTGGGAGCTGGCCGAGGCCGGCATGGCGCTCACGCGCACGTTCCGCTTCGCCG ACTATTACCGCACCCTGGCCTTTGTGAATGCGCTGGCCTGGATCGCCCACCGCGAAGACCACCACCCCGACCTGGGCGTG CATTACGACCGCGTCGTGGTGCGCTATTCCACCCATGACGTGGGCGGGCTGAGCGAGAACGACTTCATCTGCGCGGCCAA GACCGCGCAGCTCTACGATCAGGGAATCACTGCATGA
Upstream 100 bases:
>100_bases TATCTGGATCATGCGGGTTATTCTACCGCTCAAAGCGCCCTCGCTCATGGAACACCGTGATCCTGGTGGGCGCACCGTCC GCCACCCCTGCGAGACCGTC
Downstream 100 bases:
>100_bases ACATGTATCGCGCTGCGCTCGCCGGTCTCATCGTCGCCACCGGCCTTGGCGGCTGCGGCAAGTCGCCACAGCAGGCCTCT GCTCCCACCGTCGCGCCCAC
Product: pterin-4-alpha-carbinolamine dehydratase
Products: NA
Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MTDLIPLEQAHCLPRKGSDHKLGEARLAELLPQVPGWELAEAGMALTRTFRFADYYRTLAFVNALAWIAHREDHHPDLGV HYDRVVVRYSTHDVGGLSENDFICAAKTAQLYDQGITA
Sequences:
>Translated_118_residues MTDLIPLEQAHCLPRKGSDHKLGEARLAELLPQVPGWELAEAGMALTRTFRFADYYRTLAFVNALAWIAHREDHHPDLGV HYDRVVVRYSTHDVGGLSENDFICAAKTAQLYDQGITA >Mature_117_residues TDLIPLEQAHCLPRKGSDHKLGEARLAELLPQVPGWELAEAGMALTRTFRFADYYRTLAFVNALAWIAHREDHHPDLGVH YDRVVVRYSTHDVGGLSENDFICAAKTAQLYDQGITA
Specific function: Unknown
COG id: COG2154
COG function: function code H; Pterin-4a-carbinolamine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PHS_XANAC (Q8PKQ3)
Other databases:
- EMBL: AE008923 - RefSeq: NP_642433.1 - ProteinModelPortal: Q8PKQ3 - SMR: Q8PKQ3 - GeneID: 1156187 - GenomeReviews: AE008923_GR - KEGG: xac:XAC2116 - NMPDR: fig|190486.1.peg.2077 - HOGENOM: HBG705804 - OMA: AKTAQLY - ProtClustDB: PRK00823 - BioCyc: XAXO190486:XAC2116-MONOMER - BRENDA: 4.2.1.96 - HAMAP: MF_00434 - InterPro: IPR001533 - Gene3D: G3DSA:3.30.1360.20 - PANTHER: PTHR12599
Pfam domain/function: PF01329 Pterin_4a; SSF55248 Trans_pterinDh
EC number: =4.2.1.96
Molecular weight: Translated: 13246; Mature: 13115
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLIPLEQAHCLPRKGSDHKLGEARLAELLPQVPGWELAEAGMALTRTFRFADYYRTLA CCCCCCCCHHCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FVNALAWIAHREDHHPDLGVHYDRVVVRYSTHDVGGLSENDFICAAKTAQLYDQGITA HHHHHHHHHHCCCCCCCCCCEECEEEEEECCCCCCCCCCCCEEEEHHHHHHHHCCCCC >Mature Secondary Structure TDLIPLEQAHCLPRKGSDHKLGEARLAELLPQVPGWELAEAGMALTRTFRFADYYRTLA CCCCCCCHHCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FVNALAWIAHREDHHPDLGVHYDRVVVRYSTHDVGGLSENDFICAAKTAQLYDQGITA HHHHHHHHHHCCCCCCCCCCEECEEEEEECCCCCCCCCCCCEEEEHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217