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The map label for this gene is exbB [H]

Identifier: 21242824

GI number: 21242824

Start: 2433931

End: 2434593

Strand: Direct

Name: exbB [H]

Synonym: XAC2085

Alternate gene names: 21242824

Gene position: 2433931-2434593 (Clockwise)

Preceding gene: 21242823

Following gene: 21242825

Centisome position: 47.03

GC content: 64.71

Gene sequence:

>663_bases
GTGTTGGAGCTGGTCAAGGCAGGCGGTTGGCCGATGGTGCCGTTGCTGTTGCTGGGCGTGATCGCCCTGGCGATCGTGCT
GGAGCGTATGTGGAGCCTGCGCCGCAATGAGGTGACGCCGCCGGGCCTGGGTGAAGAAGTGCGCAATTGGGCCGCGCGCG
GCAATCTGGATCCCACCCACATCGAGTCGCTGCGCCGCAATTCGCCGTTGGGCGCCTTGCTGGCCGCGGCGCTTGACGTT
CGTGGCCGCCCGCGTGACGTGATCCGCGAACGTATCGAGGACACCGGCCGGCATGTGGTGCATCGCATGGAGCGCTATCT
GAACGCGTTGGGCACGATCGCATCGGCTGGGCCATTGTTGGGTCTGCTCGGTACCGTGGTCGGCATGATCCAGATGTTCA
TGGGCATCCTCGATCACGGCGTAGGCGATGTGAATCAGCTCGCCGGCGGCATTGGCAAGGCGCTGGTGTGCACTGCCACC
GGCATGATCATCGCGGTTCCGGCATTGATGGCGCATCGCTTCTTCAAGGGGCGGATCGCCGGTTACATCGTCGAGATGGA
GCAGGAAGCCATCTTGTTGCTGGACACCATGGATGGCCGAGTCGTGCCGGCAGCCTTCGCGCCGGCTGCAGCGGGCGGCA
AGCCTGTCACGGCAAAGGGTTGA

Upstream 100 bases:

>100_bases
CGCTGGCAGCCGCGGCTATGGGATGCTGCGGAACGGCGGCGGTCGGCTGCTATCCTATCGGTCAGCGAACAGGCGGCCGC
GTTGCCGGAGGAATCGAATC

Downstream 100 bases:

>100_bases
CGGATGCGCATCGGCAGCGACCGAAGCCAGGACGAGCCGCATATCGACCTGGTGCCATTGATTGACGTCATCCTCGTCCT
CATCATCTTTTTCGTGGTGA

Product: biopolymer transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MLELVKAGGWPMVPLLLLGVIALAIVLERMWSLRRNEVTPPGLGEEVRNWAARGNLDPTHIESLRRNSPLGALLAAALDV
RGRPRDVIRERIEDTGRHVVHRMERYLNALGTIASAGPLLGLLGTVVGMIQMFMGILDHGVGDVNQLAGGIGKALVCTAT
GMIIAVPALMAHRFFKGRIAGYIVEMEQEAILLLDTMDGRVVPAAFAPAAAGGKPVTAKG

Sequences:

>Translated_220_residues
MLELVKAGGWPMVPLLLLGVIALAIVLERMWSLRRNEVTPPGLGEEVRNWAARGNLDPTHIESLRRNSPLGALLAAALDV
RGRPRDVIRERIEDTGRHVVHRMERYLNALGTIASAGPLLGLLGTVVGMIQMFMGILDHGVGDVNQLAGGIGKALVCTAT
GMIIAVPALMAHRFFKGRIAGYIVEMEQEAILLLDTMDGRVVPAAFAPAAAGGKPVTAKG
>Mature_220_residues
MLELVKAGGWPMVPLLLLGVIALAIVLERMWSLRRNEVTPPGLGEEVRNWAARGNLDPTHIESLRRNSPLGALLAAALDV
RGRPRDVIRERIEDTGRHVVHRMERYLNALGTIASAGPLLGLLGTVVGMIQMFMGILDHGVGDVNQLAGGIGKALVCTAT
GMIIAVPALMAHRFFKGRIAGYIVEMEQEAILLLDTMDGRVVPAAFAPAAAGGKPVTAKG

Specific function: Involved in the tonB-dependent energy-dependent transport of various receptor-bound substrates. Protects exbD from proteolytic degradation and functionally stabilizes tonB [H]

COG id: COG0811

COG function: function code U; Biopolymer transport proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbB/tolQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002898
- InterPro:   IPR014164 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 23447; Mature: 23447

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELVKAGGWPMVPLLLLGVIALAIVLERMWSLRRNEVTPPGLGEEVRNWAARGNLDPTH
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHH
IESLRRNSPLGALLAAALDVRGRPRDVIRERIEDTGRHVVHRMERYLNALGTIASAGPLL
HHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLLGTVVGMIQMFMGILDHGVGDVNQLAGGIGKALVCTATGMIIAVPALMAHRFFKGRIA
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYIVEMEQEAILLLDTMDGRVVPAAFAPAAAGGKPVTAKG
HHHHEECCCEEEEEECCCCCEECHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MLELVKAGGWPMVPLLLLGVIALAIVLERMWSLRRNEVTPPGLGEEVRNWAARGNLDPTH
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHH
IESLRRNSPLGALLAAALDVRGRPRDVIRERIEDTGRHVVHRMERYLNALGTIASAGPLL
HHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLLGTVVGMIQMFMGILDHGVGDVNQLAGGIGKALVCTATGMIIAVPALMAHRFFKGRIA
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYIVEMEQEAILLLDTMDGRVVPAAFAPAAAGGKPVTAKG
HHHHEECCCEEEEEECCCCCEECHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8437515 [H]