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The map label for this gene is cirA

Identifier: 21242768

GI number: 21242768

Start: 2368442

End: 2371042

Strand: Direct

Name: cirA

Synonym: XAC2024

Alternate gene names: NA

Gene position: 2368442-2371042 (Clockwise)

Preceding gene: 21242766

Following gene: 21242769

Centisome position: 45.76

GC content: 62.28

Gene sequence:

>2601_bases
TTGTGCATCGGACTGGCCCTGAGTTGCAACGCGGCGGCGCAACAGGCCGCGTCCAACGCCGATGGCGCGGCGCCGGCCAC
GTCCACGTTGGAGACGGTGCAGGTCAAAGGCGTGCGCAGCAGCGTGGAAAGCGCCATTGCGATCAAACAATCGAATGCGG
AAATCAGCGATTCCATCGTGGCCGAAGACATCGGCAAGCTGCCCGACAACAGCGTGGCTGCGGCCTTGCAACGCGTGACC
GGCGTGCAGGTGGCGCGCGCTGGCGGCGAAGTGGGGCAGGTGCTGGTGCGCGGCTTGCCGAACGTCATCACGACCCTGGA
TGGGCGCAACGTCTTCACAACGGTGGGGCGCGACATGGAGCTGGCCGATGTTCCGGCCGAATTGCTGCGCAGCGTGGAGG
TGTACAAGACCACCGGCGCGCAATTTCAGGAAGGTGGCATCGCCGGGGTGGTCGATGTGCATCTGCGGCGACCGTTCGAT
TTCGATCAGGACAGCACGATTGCCGGCAGCGTAAGCGCGTTGCGGGGCGATCAGTCCGGCAAGACCGTTCCCAATGGCAG
CCTCACCATCAGCCAACGCCGCGACACCGCGATGGGCCGCATGGGCTGGATGGGGAGCGTGTCCTATCAACGCCGCCCGT
ATCAGGAATCCAACACGTTGTATGGCACTTACGATGCGAAGCCGAACCCGCTCGATCCGGCCCAGCAGATTTACGAGCCT
TACAGCGCAGGGGGATTGATGGCGCGTGGGGATCGCAAGCGCAAGTCGGCGAATTTTTCGTTTCAATGGGCGCCGAGCGA
GAACAGCGAGGTGTATTTCGACACGCTGTACATCGGTTACGACAACCGGCCCCAAGTGAATTACTGGTTGCCATTCCCGG
GGCTGGCGACGCCAGAGAACACCGAATCGGTCGGTCTGCGGCCGGGCAGTGATGTGCTGGCCGGCCTGGTGGCGCGCGAC
ATGCGCACGCTCTCCAGCACGCAGGCGCACAAGAACGCATCGGACACCTACCAAGCTGCGCTGGTCGGGCGTTGGAGTGG
CGAGCGCATGCGTGCGAGCAGCGAGCTCGCCTATACCTATACCACCGCCGAGAACCGCTCGTTCACGCTGGACATGAACA
CGCAGGCGCCGCGATTGAACATGCGTTCGGCGGGAGGCGCTGCAGATGTCTGGATTACCCAGGCCGATGGCAGCGCGTAC
GACATCACCGCGCCAGGCAATTGGGAACTGAGTCAGTACTACGACAGCTGGAACGCCCAGAAAGGCGAGGAGTGGGCGTG
GCGGGCCGATGCCACCTTCGATCTGGAGCTGGGGCCGTTGCGATCAGTGGACGTGGGTGCGCGCGCAAGCAGGCGGACGG
CGACCAATCATTCCGGGGATACCGGCGCGCGCGACAATCCGAGCGGCGCACCGATCTACTTGAGCGACGTGCCCGGCCTG
GCATCGGTAACGCCCGGCAACATGCTCGACGGTGCGCGTGCATTCACCAGCGATCGCTGGGCATCGGCCAACCAGGATTT
TCTGCTGCAGCAAAGCATCCAGGTGCGTACCTCGATGGGGCAGCCGCCGGGCCCGCCCGATGAAAACCCTGACTTGTTCT
TCGACGATCGCGAAGACAGCTATGCGATCTACGCGCAGGTGAATTACGGTTTCTCGCTTGGGTCCATCCCTGTGGATGGA
CGTGTCGGCGCGCGCGCGACGCGATTGGATTCGCAATTGCAGGGCAGCCAGTCGCTGGATGGCGTGCTGAGCCCGGTCAG
CATCGATCGGCGTATCGACAAGGTGTTACCCAACTACAGCGCCAACCTCAGCTTGCATGAAAACCTGATGCTGCGGCTCG
CCGGCAGCACGACGATCACGCGACCGGAATTTGCCGATCTCAATCCGCAGCTGGCCTTGTACCAGTCCACCGAATCGTTG
CCGGCACGCGGCAATGGCGGGAACCCGCAGCTGCGTCCGGTGGAATCGCGCAATGCCGATGTGTCGCTGGAATGGTATTT
CCGCCCCGGCTCCTTGCTGTCGGTTGCCGGCTTTCATCGCAAGATCGATGGCTATATCCAGAATTACGCAGCCGATGAAT
CCATCGATGGCATCGTCTATTCGATCAGCCGACCGCGCAATACCGGCGAGGGCAGCTTGAAGGGCGTGGAGGTGGGGTAT
ACGCAGTTCTACGACTTTCTGCCGGGTTGGTGGTCCGGCTTCGGCAGTCAGCTCAACTACACGTATCTCTCGGCCGAGGC
CGATTCGCCCGAGGGTATCGGCCAGCCGTTGACCAACGTGTCCAAAAATTCCTACAACGCGATCCTGATGTACGAATACG
CGCGGTTCTCGGCGCGGGTCGCCTACAACTGGCGCGGCGACTATGTGGTGAGTTTCAACAGCTCAGGCGATCAGCCCGAG
CAGATCAGTCAGGGGCGGGAGAAGTGGCTGGATGCGGCCTTCAATTACGAGCTCAACAAGCATGTGACCTTGTTCGCCGA
GGCCACCAATCTGCTCGGCACCACGACCAACAATTATTTCGGTCAGCGGCATGGCGACTTCCCGCGCGAGATCGCATCGC
CCGAACGCACTTACACGCTGGGTTTTCGCTTCCGTTTGTGA

Upstream 100 bases:

>100_bases
AGCCGCGTCGTCGCAGTGCCTGCCTCAGGAGGCCATGATGCTTATTCCATCCCAGCACGCGTACGTTGCGCGACGTGCCA
ACACGTATCGACCGCTGGGT

Downstream 100 bases:

>100_bases
TGCGGATAACGCGGTCTGCGCGAGACGTTGGCATCAGGCTCACCGGCGCAACGGTAGCGTGAGCCCAGCAGAGGAGACCG
TGATGACACCTGACATCGAT

Product: TonB-dependent receptor

Products: NA

Alternate protein names: Nb-Dependent Receptor; NB-Dependent Receptor Subfamily; NB-Dependent Outer Membrane Receptor; NB-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor Protein; Nb-Dependent Outer Membrane Receptor Protein; NB-Dependent Receptor Subfamily Protein; Outer Membrane Protein; NB Dependent Receptor-Related Protein; Crossover Junction Endodeoxyribonuclease RuvC; NB Dependent Receptor; NB-Dependent Receptor-Like Protein; NB Dependent Receptor For Iron Chelates; Outer Membrane Receptor Proteins Mostly Fe Transport-Like; NB-Dependent Outer Membrane Ferripyoverdine Receptor; DEAD/DEAH Box Helicase-Like; Peptidase; 1-(5-Phosphoribosyl)-5-; Argininosuccinate Synthase

Number of amino acids: Translated: 866; Mature: 866

Protein sequence:

>866_residues
MCIGLALSCNAAAQQAASNADGAAPATSTLETVQVKGVRSSVESAIAIKQSNAEISDSIVAEDIGKLPDNSVAAALQRVT
GVQVARAGGEVGQVLVRGLPNVITTLDGRNVFTTVGRDMELADVPAELLRSVEVYKTTGAQFQEGGIAGVVDVHLRRPFD
FDQDSTIAGSVSALRGDQSGKTVPNGSLTISQRRDTAMGRMGWMGSVSYQRRPYQESNTLYGTYDAKPNPLDPAQQIYEP
YSAGGLMARGDRKRKSANFSFQWAPSENSEVYFDTLYIGYDNRPQVNYWLPFPGLATPENTESVGLRPGSDVLAGLVARD
MRTLSSTQAHKNASDTYQAALVGRWSGERMRASSELAYTYTTAENRSFTLDMNTQAPRLNMRSAGGAADVWITQADGSAY
DITAPGNWELSQYYDSWNAQKGEEWAWRADATFDLELGPLRSVDVGARASRRTATNHSGDTGARDNPSGAPIYLSDVPGL
ASVTPGNMLDGARAFTSDRWASANQDFLLQQSIQVRTSMGQPPGPPDENPDLFFDDREDSYAIYAQVNYGFSLGSIPVDG
RVGARATRLDSQLQGSQSLDGVLSPVSIDRRIDKVLPNYSANLSLHENLMLRLAGSTTITRPEFADLNPQLALYQSTESL
PARGNGGNPQLRPVESRNADVSLEWYFRPGSLLSVAGFHRKIDGYIQNYAADESIDGIVYSISRPRNTGEGSLKGVEVGY
TQFYDFLPGWWSGFGSQLNYTYLSAEADSPEGIGQPLTNVSKNSYNAILMYEYARFSARVAYNWRGDYVVSFNSSGDQPE
QISQGREKWLDAAFNYELNKHVTLFAEATNLLGTTTNNYFGQRHGDFPREIASPERTYTLGFRFRL

Sequences:

>Translated_866_residues
MCIGLALSCNAAAQQAASNADGAAPATSTLETVQVKGVRSSVESAIAIKQSNAEISDSIVAEDIGKLPDNSVAAALQRVT
GVQVARAGGEVGQVLVRGLPNVITTLDGRNVFTTVGRDMELADVPAELLRSVEVYKTTGAQFQEGGIAGVVDVHLRRPFD
FDQDSTIAGSVSALRGDQSGKTVPNGSLTISQRRDTAMGRMGWMGSVSYQRRPYQESNTLYGTYDAKPNPLDPAQQIYEP
YSAGGLMARGDRKRKSANFSFQWAPSENSEVYFDTLYIGYDNRPQVNYWLPFPGLATPENTESVGLRPGSDVLAGLVARD
MRTLSSTQAHKNASDTYQAALVGRWSGERMRASSELAYTYTTAENRSFTLDMNTQAPRLNMRSAGGAADVWITQADGSAY
DITAPGNWELSQYYDSWNAQKGEEWAWRADATFDLELGPLRSVDVGARASRRTATNHSGDTGARDNPSGAPIYLSDVPGL
ASVTPGNMLDGARAFTSDRWASANQDFLLQQSIQVRTSMGQPPGPPDENPDLFFDDREDSYAIYAQVNYGFSLGSIPVDG
RVGARATRLDSQLQGSQSLDGVLSPVSIDRRIDKVLPNYSANLSLHENLMLRLAGSTTITRPEFADLNPQLALYQSTESL
PARGNGGNPQLRPVESRNADVSLEWYFRPGSLLSVAGFHRKIDGYIQNYAADESIDGIVYSISRPRNTGEGSLKGVEVGY
TQFYDFLPGWWSGFGSQLNYTYLSAEADSPEGIGQPLTNVSKNSYNAILMYEYARFSARVAYNWRGDYVVSFNSSGDQPE
QISQGREKWLDAAFNYELNKHVTLFAEATNLLGTTTNNYFGQRHGDFPREIASPERTYTLGFRFRL
>Mature_866_residues
MCIGLALSCNAAAQQAASNADGAAPATSTLETVQVKGVRSSVESAIAIKQSNAEISDSIVAEDIGKLPDNSVAAALQRVT
GVQVARAGGEVGQVLVRGLPNVITTLDGRNVFTTVGRDMELADVPAELLRSVEVYKTTGAQFQEGGIAGVVDVHLRRPFD
FDQDSTIAGSVSALRGDQSGKTVPNGSLTISQRRDTAMGRMGWMGSVSYQRRPYQESNTLYGTYDAKPNPLDPAQQIYEP
YSAGGLMARGDRKRKSANFSFQWAPSENSEVYFDTLYIGYDNRPQVNYWLPFPGLATPENTESVGLRPGSDVLAGLVARD
MRTLSSTQAHKNASDTYQAALVGRWSGERMRASSELAYTYTTAENRSFTLDMNTQAPRLNMRSAGGAADVWITQADGSAY
DITAPGNWELSQYYDSWNAQKGEEWAWRADATFDLELGPLRSVDVGARASRRTATNHSGDTGARDNPSGAPIYLSDVPGL
ASVTPGNMLDGARAFTSDRWASANQDFLLQQSIQVRTSMGQPPGPPDENPDLFFDDREDSYAIYAQVNYGFSLGSIPVDG
RVGARATRLDSQLQGSQSLDGVLSPVSIDRRIDKVLPNYSANLSLHENLMLRLAGSTTITRPEFADLNPQLALYQSTESL
PARGNGGNPQLRPVESRNADVSLEWYFRPGSLLSVAGFHRKIDGYIQNYAADESIDGIVYSISRPRNTGEGSLKGVEVGY
TQFYDFLPGWWSGFGSQLNYTYLSAEADSPEGIGQPLTNVSKNSYNAILMYEYARFSARVAYNWRGDYVVSFNSSGDQPE
QISQGREKWLDAAFNYELNKHVTLFAEATNLLGTTTNNYFGQRHGDFPREIASPERTYTLGFRFRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 94535; Mature: 94535

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCIGLALSCNAAAQQAASNADGAAPATSTLETVQVKGVRSSVESAIAIKQSNAEISDSIV
CEEEEEEECCHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHHHEEEECCCCCHHHHHH
AEDIGKLPDNSVAAALQRVTGVQVARAGGEVGQVLVRGLPNVITTLDGRNVFTTVGRDME
HHHHHCCCCHHHHHHHHHHHHHHEECCCCHHHHHHHHCCCHHHEECCCCEEEEECCCCCC
LADVPAELLRSVEVYKTTGAQFQEGGIAGVVDVHLRRPFDFDQDSTIAGSVSALRGDQSG
HHHHHHHHHHHEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHCCCCCC
KTVPNGSLTISQRRDTAMGRMGWMGSVSYQRRPYQESNTLYGTYDAKPNPLDPAQQIYEP
CCCCCCCEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCC
YSAGGLMARGDRKRKSANFSFQWAPSENSEVYFDTLYIGYDNRPQVNYWLPFPGLATPEN
CCCCCEEECCCCHHCCCCEEEEECCCCCCEEEEEEEEEECCCCCCEEEEECCCCCCCCCC
TESVGLRPGSDVLAGLVARDMRTLSSTQAHKNASDTYQAALVGRWSGERMRASSELAYTY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHCCCCCEEEEE
TTAENRSFTLDMNTQAPRLNMRSAGGAADVWITQADGSAYDITAPGNWELSQYYDSWNAQ
EECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCHHHHHHCCCCC
KGEEWAWRADATFDLELGPLRSVDVGARASRRTATNHSGDTGARDNPSGAPIYLSDVPGL
CCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC
ASVTPGNMLDGARAFTSDRWASANQDFLLQQSIQVRTSMGQPPGPPDENPDLFFDDREDS
CCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCC
YAIYAQVNYGFSLGSIPVDGRVGARATRLDSQLQGSQSLDGVLSPVSIDRRIDKVLPNYS
EEEEEEEECCEEECCCCCCCCCCCHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHCCCCC
ANLSLHENLMLRLAGSTTITRPEFADLNPQLALYQSTESLPARGNGGNPQLRPVESRNAD
CCCEECCEEEEEEECCCEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCC
VSLEWYFRPGSLLSVAGFHRKIDGYIQNYAADESIDGIVYSISRPRNTGEGSLKGVEVGY
EEEEEEECCCCEEEHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEEECH
TQFYDFLPGWWSGFGSQLNYTYLSAEADSPEGIGQPLTNVSKNSYNAILMYEYARFSARV
HHHHHCCCHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHCCCCCCCEEEEEEEECCEEEE
AYNWRGDYVVSFNSSGDQPEQISQGREKWLDAAFNYELNKHVTLFAEATNLLGTTTNNYF
EEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHCEECCCCEEEEEECCHHHCCCCCCCC
GQRHGDFPREIASPERTYTLGFRFRL
CCCCCCCCHHHCCCCCEEEEEEEEEC
>Mature Secondary Structure
MCIGLALSCNAAAQQAASNADGAAPATSTLETVQVKGVRSSVESAIAIKQSNAEISDSIV
CEEEEEEECCHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHHHEEEECCCCCHHHHHH
AEDIGKLPDNSVAAALQRVTGVQVARAGGEVGQVLVRGLPNVITTLDGRNVFTTVGRDME
HHHHHCCCCHHHHHHHHHHHHHHEECCCCHHHHHHHHCCCHHHEECCCCEEEEECCCCCC
LADVPAELLRSVEVYKTTGAQFQEGGIAGVVDVHLRRPFDFDQDSTIAGSVSALRGDQSG
HHHHHHHHHHHEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHCCCCCC
KTVPNGSLTISQRRDTAMGRMGWMGSVSYQRRPYQESNTLYGTYDAKPNPLDPAQQIYEP
CCCCCCCEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCC
YSAGGLMARGDRKRKSANFSFQWAPSENSEVYFDTLYIGYDNRPQVNYWLPFPGLATPEN
CCCCCEEECCCCHHCCCCEEEEECCCCCCEEEEEEEEEECCCCCCEEEEECCCCCCCCCC
TESVGLRPGSDVLAGLVARDMRTLSSTQAHKNASDTYQAALVGRWSGERMRASSELAYTY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHCCCCCEEEEE
TTAENRSFTLDMNTQAPRLNMRSAGGAADVWITQADGSAYDITAPGNWELSQYYDSWNAQ
EECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCHHHHHHCCCCC
KGEEWAWRADATFDLELGPLRSVDVGARASRRTATNHSGDTGARDNPSGAPIYLSDVPGL
CCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC
ASVTPGNMLDGARAFTSDRWASANQDFLLQQSIQVRTSMGQPPGPPDENPDLFFDDREDS
CCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCC
YAIYAQVNYGFSLGSIPVDGRVGARATRLDSQLQGSQSLDGVLSPVSIDRRIDKVLPNYS
EEEEEEEECCEEECCCCCCCCCCCHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHCCCCC
ANLSLHENLMLRLAGSTTITRPEFADLNPQLALYQSTESLPARGNGGNPQLRPVESRNAD
CCCEECCEEEEEEECCCEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCC
VSLEWYFRPGSLLSVAGFHRKIDGYIQNYAADESIDGIVYSISRPRNTGEGSLKGVEVGY
EEEEEEECCCCEEEHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEEECH
TQFYDFLPGWWSGFGSQLNYTYLSAEADSPEGIGQPLTNVSKNSYNAILMYEYARFSARV
HHHHHCCCHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHCCCCCCCEEEEEEEECCEEEE
AYNWRGDYVVSFNSSGDQPEQISQGREKWLDAAFNYELNKHVTLFAEATNLLGTTTNNYF
EEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHCEECCCCEEEEEECCHHHCCCCCCCC
GQRHGDFPREIASPERTYTLGFRFRL
CCCCCCCCHHHCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA