| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is fliE [H]
Identifier: 21242699
GI number: 21242699
Start: 2286057
End: 2286374
Strand: Reverse
Name: fliE [H]
Synonym: XAC1955
Alternate gene names: 21242699
Gene position: 2286374-2286057 (Counterclockwise)
Preceding gene: 21242701
Following gene: 21242698
Centisome position: 44.18
GC content: 66.67
Gene sequence:
>318_bases ATGGGCCAAGGCTCGATGGGCGCGGTAGGCGATGCGGCGCGTGGCAACCAGATCCAGGGACTGGCCGGCACGCAGGGAAC ACCGGCGACGCAGGCACCGAGCTTCAGCGAGACCTTGCGCGGCGCCATCGGCGGCGTCAACGAGGCCCAGCAGAAGGCCG GCGCACTGTCCAAAGCATTCGAAATGGGCGACCCCAAGGCCGATCTGGCACGGGTCATGGTCGCCTCCCAGCAGTCCCAG GTGGCCTTCCGCGCCACCGTGGAAGTCCGCAACCGTCTCGTCCAGGCTTATCAGGACGTCATGAACATGCCGCTGTAA
Upstream 100 bases:
>100_bases CACGCCGCTTGCATTGGTGTCACTGCCTCCCTGGCTGACCGCACCCATGAGCGACTCCGTTACCTCCATCCTCTCGCAGA TCCGCAGCTACCAGACGCAG
Downstream 100 bases:
>100_bases AGGTTGACGACACATGGCACTCGCGATCAGCAAAGAAAACATGAACCAGAACGCCGAAAAGGCGGGGCAATGGTTCGACC GTGTCCGCAGCCTGCAGATC
Product: flagellar protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MGQGSMGAVGDAARGNQIQGLAGTQGTPATQAPSFSETLRGAIGGVNEAQQKAGALSKAFEMGDPKADLARVMVASQQSQ VAFRATVEVRNRLVQAYQDVMNMPL
Sequences:
>Translated_105_residues MGQGSMGAVGDAARGNQIQGLAGTQGTPATQAPSFSETLRGAIGGVNEAQQKAGALSKAFEMGDPKADLARVMVASQQSQ VAFRATVEVRNRLVQAYQDVMNMPL >Mature_104_residues GQGSMGAVGDAARGNQIQGLAGTQGTPATQAPSFSETLRGAIGGVNEAQQKAGALSKAFEMGDPKADLARVMVASQQSQV AFRATVEVRNRLVQAYQDVMNMPL
Specific function: Unknown
COG id: COG1677
COG function: function code NU; Flagellar hook-basal body protein
Gene ontology:
Cell location: Bacterial flagellum basal body (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fliE family [H]
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001624 [H]
Pfam domain/function: PF02049 FliE [H]
EC number: NA
Molecular weight: Translated: 10866; Mature: 10735
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQGSMGAVGDAARGNQIQGLAGTQGTPATQAPSFSETLRGAIGGVNEAQQKAGALSKAF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH EMGDPKADLARVMVASQQSQVAFRATVEVRNRLVQAYQDVMNMPL HCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GQGSMGAVGDAARGNQIQGLAGTQGTPATQAPSFSETLRGAIGGVNEAQQKAGALSKAF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH EMGDPKADLARVMVASQQSQVAFRATVEVRNRLVQAYQDVMNMPL HCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA