| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is fliQ [C]
Identifier: 21242686
GI number: 21242686
Start: 2275150
End: 2275419
Strand: Reverse
Name: fliQ [C]
Synonym: XAC1942
Alternate gene names: 21242686
Gene position: 2275419-2275150 (Counterclockwise)
Preceding gene: 21242688
Following gene: 21242685
Centisome position: 43.96
GC content: 63.7
Gene sequence:
>270_bases ATGAGCCCTGAAATCGCCCTGACTGAATTGCGTGGTGGCCTGGTCACCGTCCTGTGGATTGCCGGACCGATGTTGCTGGC CGTGCTGGTGGTCGGCGTGGTGATCGGCGTGGTGCAGGCCGCCACCCAGTTGAACGAACCGACCATCGCCTTCGTGGCCA AGGCAGTGGCGCTGACGGCCACGCTGTTCGCCACCGGCAGCATGCTGCTGGGGCATCTGGTGGAGTTCACCATTGCGCTG TTCCAGCGCATTCCGCATCTGATCGGCTAG
Upstream 100 bases:
>100_bases ACAGCCAGTGCAACACGAGGCAACTCAGATCCCCGTTCGCCAACCAATCCCCAATCCCCAATCCCACACCTTTGGCATCC CACTTGCATCAGCACCTCCC
Downstream 100 bases:
>100_bases CGGGCCAGAGCGGATGGATTCTGCAACCCAGATGGTGATCGATGGCCAGCGCGCGTTCGCGATGGTCGGAGCGATCATGT GGACCATGCTGCGCACCGGT
Product: flagellar biosynthesis
Products: NA
Alternate protein names: Flagellar Biosynthetic Protein FliQ; Flagellar Biosynthesis
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MSPEIALTELRGGLVTVLWIAGPMLLAVLVVGVVIGVVQAATQLNEPTIAFVAKAVALTATLFATGSMLLGHLVEFTIAL FQRIPHLIG
Sequences:
>Translated_89_residues MSPEIALTELRGGLVTVLWIAGPMLLAVLVVGVVIGVVQAATQLNEPTIAFVAKAVALTATLFATGSMLLGHLVEFTIAL FQRIPHLIG >Mature_88_residues SPEIALTELRGGLVTVLWIAGPMLLAVLVVGVVIGVVQAATQLNEPTIAFVAKAVALTATLFATGSMLLGHLVEFTIALF QRIPHLIG
Specific function: Required For The Assembly Of The Rivet At The Earliest Stage Of Flagellar Biosynthesis. [C]
COG id: COG1987
COG function: function code NU; Flagellar biosynthesis pathway, component FliQ
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9276; Mature: 9145
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPEIALTELRGGLVTVLWIAGPMLLAVLVVGVVIGVVQAATQLNEPTIAFVAKAVALTA CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH TLFATGSMLLGHLVEFTIALFQRIPHLIG HHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SPEIALTELRGGLVTVLWIAGPMLLAVLVVGVVIGVVQAATQLNEPTIAFVAKAVALTA CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH TLFATGSMLLGHLVEFTIALFQRIPHLIG HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA