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The map label for this gene is tsr [H]

Identifier: 21242637

GI number: 21242637

Start: 2203249

End: 2205312

Strand: Reverse

Name: tsr [H]

Synonym: XAC1893

Alternate gene names: 21242637

Gene position: 2205312-2203249 (Counterclockwise)

Preceding gene: 21242638

Following gene: 21242636

Centisome position: 42.61

GC content: 65.6

Gene sequence:

>2064_bases
ATGCGCAGCGCCAGTGCAGCTATTGCGATCAATCTGCGCAACATCGTGCTGCCGACCACGCAGGAAGAAAACCTCGGTTT
TGCCAAGGTGATCGAGGAACAGCGGCAGAACTACAACCAAAACCGCGAAAAGCTCTACGCACGCCCGCCGTCCAACGCTG
CCGGCGCGGAGATGCGTCGGCAGATTGATATTGCGCGCGAAAAAGCGCGTATCGCCAATCAGCAGGTCATGGACCTGGGC
TTGAACTACAAGCCTGATGAGGCACTCAAGGTGTTGATGCAGCAGGCGGTACCGGCGAACCAACAATGGCAGGCCGCACT
CGATGCGTACGCTGCGCGCCAGCGCAGCCGTGGCGCCGCGGCTTATGACGATGCCAATACCGCCATGGACTATGGCCGGG
CGTTGCTGATCGCCGGCGGCATTGCGGTCGTCGTGATCAGCGGCCTGCTGGCCTGGCTGATCACCCGCAGCCTGACCCAG
CCCTTGAACCGCGCCACCCGTGCCGCCGAGGCCATCGCCGAGGGCCGCCTGGATAGCAATGTGCATACCACCGCCACCGA
CGAGCCCGGCCGGCTGCTCAGCGCCATGGCCAAGATGCAGACGCAGTTGCAACGTTTCTCCAGCGAAACCGCGCGGATGA
TCGAGCTGCACGCCGACAAGGACATCAGCCACCGCATGCCGCAGGACTTCCCCGGCGTGTATGGCGACTTGAGCAAGGGC
ATCAACACCATGATGTTCGAGCACCTGGACGCCATCGTCGATGCCGTCGAAGTGCTCAACGAATACGCCCGTGGCGATCT
GCGCCGCGATGCACGGCGCCTGCCGGGCAGCCGCGCGGTGCTGCACGAATCGATGGATGCGGCCAAAACCAGCCTGTTGG
CGATCAACACCGAGATCCAGCGCCTGGCCAGCGCGGCGGCTGCCGGCGACTTCAGCGCACGCGGCGATGCGCAGCGGTTC
GAGCACGATTTCCTGCGCATGGTGCAGGACCTCAACGCGATGATGGAGGTCAGCGACACCAGCCTGGGCAGCTTGTCGGC
GCTGTTGCAGTCCATCGCCGCCGGCGATCTCACCGCCCGCATGCACGGCAACTTCCACGGTGTGTTCGCCAAGATGCGCG
ACGACGCCAACGCCACCACCGAACAGCTCACGCGTATCGTGGTGCGGATCCAGGGCGCGGCCGGCAACATCGGCGCGGCC
ACCGGCGAAATCGCCGCCGGCAACCAGGATCTGTCGCAGCGTACCGAACAACAGGCCGCCAACCTGGAAGAGACCGCTGC
CTCGATGGAAGAGCTCACCTCCACCGTCAAGCAGAACGCCGAAAGCGCACGCCAGGCCAACCAGCTCGCCATCGGCGCCG
CCCGCGTTGCGTCGCAAGGCGGCGAGATCGCCGGCAAGGTGGTCGAGACCATGAGCGGGATCGAGTCTTCGTCCAAGAAA
ATCGCCGATATCATCAGCGTCATCGATGGCATCTCGTTCCAGACCAACATCCTGGCGCTCAACGCCGCGGTGGAAGCGGC
GCGTGCCGGCGAACAAGGCCGCGGCTTTGCCGTGGTGGCCAGCGAAGTGCGTACGCTTGCGCAGCGCTCCACCGCCGCGG
CCAAGGAGATCAAGAGCCTGATCGACGATTCGGTGCAACGCGTCGCCGAAGGCTCGCTGCTGGTGCACAGCGCCGGCACC
ACCATGGCCGAGATCGTGTCCAGCGTGCAGCGCGTCACCGACATCATGGGCGAGATCTCCGCGGCCTCGCAGGAGCAGTC
GGCCGGCATCGAGCAGGTCAACCAGACCGTCACCCAGATGGACGAAACCACCCAGCAGAACGCCGCACTGGTGGAAGAAG
CCACCGCCGCCGCCCGCGCACTGGAAGAACAGGCGCTCGGATTGACCGAGGCAGTGGCGGTCTTCAAGACCGACAGCAAC
GACGCATCGCGTGCAGCATCACGACGCCCGGCAGCAACGCCGGCGCTTGCGGCCAAGGCGGTGGCAGCCGGCCGCGCTCC
TGCCCCCAGGCTGCGCGCCGTGGTCGCTGCGCCAGGCAACGACAGCAGCTGGCAGGAGTTCTGA

Upstream 100 bases:

>100_bases
CGGCCTGGTGGCCGCTGGCCTGATGACCCTGGCGCAAGCGCGTGGGCGCATGGAGTCGATCGTCAAGCACAATATGGCGA
TCCTCGAATATGTCGGCGAG

Downstream 100 bases:

>100_bases
ACAGATCGCCAGCACTGACTGAACCGGACTGGTCGGCAGCGCTGCCGACCCGCTAAAGGCGTACGCGTCGTTAGCCGATA
GCCTGCTTACATCCATGAGA

Product: chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 687; Mature: 687

Protein sequence:

>687_residues
MRSASAAIAINLRNIVLPTTQEENLGFAKVIEEQRQNYNQNREKLYARPPSNAAGAEMRRQIDIAREKARIANQQVMDLG
LNYKPDEALKVLMQQAVPANQQWQAALDAYAARQRSRGAAAYDDANTAMDYGRALLIAGGIAVVVISGLLAWLITRSLTQ
PLNRATRAAEAIAEGRLDSNVHTTATDEPGRLLSAMAKMQTQLQRFSSETARMIELHADKDISHRMPQDFPGVYGDLSKG
INTMMFEHLDAIVDAVEVLNEYARGDLRRDARRLPGSRAVLHESMDAAKTSLLAINTEIQRLASAAAAGDFSARGDAQRF
EHDFLRMVQDLNAMMEVSDTSLGSLSALLQSIAAGDLTARMHGNFHGVFAKMRDDANATTEQLTRIVVRIQGAAGNIGAA
TGEIAAGNQDLSQRTEQQAANLEETAASMEELTSTVKQNAESARQANQLAIGAARVASQGGEIAGKVVETMSGIESSSKK
IADIISVIDGISFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSTAAAKEIKSLIDDSVQRVAEGSLLVHSAGT
TMAEIVSSVQRVTDIMGEISAASQEQSAGIEQVNQTVTQMDETTQQNAALVEEATAAARALEEQALGLTEAVAVFKTDSN
DASRAASRRPAATPALAAKAVAAGRAPAPRLRAVVAAPGNDSSWQEF

Sequences:

>Translated_687_residues
MRSASAAIAINLRNIVLPTTQEENLGFAKVIEEQRQNYNQNREKLYARPPSNAAGAEMRRQIDIAREKARIANQQVMDLG
LNYKPDEALKVLMQQAVPANQQWQAALDAYAARQRSRGAAAYDDANTAMDYGRALLIAGGIAVVVISGLLAWLITRSLTQ
PLNRATRAAEAIAEGRLDSNVHTTATDEPGRLLSAMAKMQTQLQRFSSETARMIELHADKDISHRMPQDFPGVYGDLSKG
INTMMFEHLDAIVDAVEVLNEYARGDLRRDARRLPGSRAVLHESMDAAKTSLLAINTEIQRLASAAAAGDFSARGDAQRF
EHDFLRMVQDLNAMMEVSDTSLGSLSALLQSIAAGDLTARMHGNFHGVFAKMRDDANATTEQLTRIVVRIQGAAGNIGAA
TGEIAAGNQDLSQRTEQQAANLEETAASMEELTSTVKQNAESARQANQLAIGAARVASQGGEIAGKVVETMSGIESSSKK
IADIISVIDGISFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSTAAAKEIKSLIDDSVQRVAEGSLLVHSAGT
TMAEIVSSVQRVTDIMGEISAASQEQSAGIEQVNQTVTQMDETTQQNAALVEEATAAARALEEQALGLTEAVAVFKTDSN
DASRAASRRPAATPALAAKAVAAGRAPAPRLRAVVAAPGNDSSWQEF
>Mature_687_residues
MRSASAAIAINLRNIVLPTTQEENLGFAKVIEEQRQNYNQNREKLYARPPSNAAGAEMRRQIDIAREKARIANQQVMDLG
LNYKPDEALKVLMQQAVPANQQWQAALDAYAARQRSRGAAAYDDANTAMDYGRALLIAGGIAVVVISGLLAWLITRSLTQ
PLNRATRAAEAIAEGRLDSNVHTTATDEPGRLLSAMAKMQTQLQRFSSETARMIELHADKDISHRMPQDFPGVYGDLSKG
INTMMFEHLDAIVDAVEVLNEYARGDLRRDARRLPGSRAVLHESMDAAKTSLLAINTEIQRLASAAAAGDFSARGDAQRF
EHDFLRMVQDLNAMMEVSDTSLGSLSALLQSIAAGDLTARMHGNFHGVFAKMRDDANATTEQLTRIVVRIQGAAGNIGAA
TGEIAAGNQDLSQRTEQQAANLEETAASMEELTSTVKQNAESARQANQLAIGAARVASQGGEIAGKVVETMSGIESSSKK
IADIISVIDGISFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSTAAAKEIKSLIDDSVQRVAEGSLLVHSAGT
TMAEIVSSVQRVTDIMGEISAASQEQSAGIEQVNQTVTQMDETTQQNAALVEEATAAARALEEQALGLTEAVAVFKTDSN
DASRAASRRPAATPALAAKAVAAGRAPAPRLRAVVAAPGNDSSWQEF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=324, Percent_Identity=57.7160493827161, Blast_Score=298, Evalue=8e-82,
Organism=Escherichia coli, GI2367378, Length=339, Percent_Identity=57.5221238938053, Blast_Score=297, Evalue=1e-81,
Organism=Escherichia coli, GI1788194, Length=322, Percent_Identity=54.3478260869565, Blast_Score=284, Evalue=1e-77,
Organism=Escherichia coli, GI1787690, Length=306, Percent_Identity=54.9019607843137, Blast_Score=275, Evalue=6e-75,
Organism=Escherichia coli, GI1789453, Length=232, Percent_Identity=46.1206896551724, Blast_Score=196, Evalue=4e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 73240; Mature: 73240

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSASAAIAINLRNIVLPTTQEENLGFAKVIEEQRQNYNQNREKLYARPPSNAAGAEMRR
CCCCCEEEEEEECCEEECCCCCCCCCHHHHHHHHHHCCCCCHHHEECCCCCCCHHHHHHH
QIDIAREKARIANQQVMDLGLNYKPDEALKVLMQQAVPANQQWQAALDAYAARQRSRGAA
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC
AYDDANTAMDYGRALLIAGGIAVVVISGLLAWLITRSLTQPLNRATRAAEAIAEGRLDSN
CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VHTTATDEPGRLLSAMAKMQTQLQRFSSETARMIELHADKDISHRMPQDFPGVYGDLSKG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHH
INTMMFEHLDAIVDAVEVLNEYARGDLRRDARRLPGSRAVLHESMDAAKTSLLAINTEIQ
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
RLASAAAAGDFSARGDAQRFEHDFLRMVQDLNAMMEVSDTSLGSLSALLQSIAAGDLTAR
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHH
MHGNFHGVFAKMRDDANATTEQLTRIVVRIQGAAGNIGAATGEIAAGNQDLSQRTEQQAA
HCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
NLEETAASMEELTSTVKQNAESARQANQLAIGAARVASQGGEIAGKVVETMSGIESSSKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
IADIISVIDGISFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSTAAAKEIKSL
HHHHHHHHHCCCCHHHHEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IDDSVQRVAEGSLLVHSAGTTMAEIVSSVQRVTDIMGEISAASQEQSAGIEQVNQTVTQM
HHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHH
DETTQQNAALVEEATAAARALEEQALGLTEAVAVFKTDSNDASRAASRRPAATPALAAKA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEECCCCHHHHHHCCCCCCCHHHHHHH
VAAGRAPAPRLRAVVAAPGNDSSWQEF
HHCCCCCCCHHEEEEECCCCCCCCCCC
>Mature Secondary Structure
MRSASAAIAINLRNIVLPTTQEENLGFAKVIEEQRQNYNQNREKLYARPPSNAAGAEMRR
CCCCCEEEEEEECCEEECCCCCCCCCHHHHHHHHHHCCCCCHHHEECCCCCCCHHHHHHH
QIDIAREKARIANQQVMDLGLNYKPDEALKVLMQQAVPANQQWQAALDAYAARQRSRGAA
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC
AYDDANTAMDYGRALLIAGGIAVVVISGLLAWLITRSLTQPLNRATRAAEAIAEGRLDSN
CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VHTTATDEPGRLLSAMAKMQTQLQRFSSETARMIELHADKDISHRMPQDFPGVYGDLSKG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHH
INTMMFEHLDAIVDAVEVLNEYARGDLRRDARRLPGSRAVLHESMDAAKTSLLAINTEIQ
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
RLASAAAAGDFSARGDAQRFEHDFLRMVQDLNAMMEVSDTSLGSLSALLQSIAAGDLTAR
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHH
MHGNFHGVFAKMRDDANATTEQLTRIVVRIQGAAGNIGAATGEIAAGNQDLSQRTEQQAA
HCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
NLEETAASMEELTSTVKQNAESARQANQLAIGAARVASQGGEIAGKVVETMSGIESSSKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
IADIISVIDGISFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSTAAAKEIKSL
HHHHHHHHHCCCCHHHHEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IDDSVQRVAEGSLLVHSAGTTMAEIVSSVQRVTDIMGEISAASQEQSAGIEQVNQTVTQM
HHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHH
DETTQQNAALVEEATAAARALEEQALGLTEAVAVFKTDSNDASRAASRRPAATPALAAKA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEECCCCHHHHHHCCCCCCCHHHHHHH
VAAGRAPAPRLRAVVAAPGNDSSWQEF
HHCCCCCCCHHEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]