| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242592
Identifier: 21242592
GI number: 21242592
Start: 2145329
End: 2145715
Strand: Reverse
Name: 21242592
Synonym: XAC1848
Alternate gene names: NA
Gene position: 2145715-2145329 (Counterclockwise)
Preceding gene: 21242593
Following gene: 21242588
Centisome position: 41.46
GC content: 65.37
Gene sequence:
>387_bases ATGCGTCGCGTGGCTGTTGTCGTGGCCGTAGGTGTGCTGGCGGCCTGCAGCGTGCAGCAAGCACCGACGCAGGCCGCAAC GCCTGCGCCGGTGGCCTGCACCGATCCCAAGGTGGAAGAGGAATGGCTGCAGCATCCGGCAGGCCTGTGCGGCATGCCCG AGGAGGTGCGCAAACTGGTCGAGGACTACGACACCTGCGAGCACTTCGCCGGCGAAGAGCCGTATGACGCCGACCGCCGG CATGAGATCGAAGTGGCCGTGGCACAGTTCTGCACCCCGGCACCGGCACGCCTGGCCAAGTTGATGCAGCAGTACCGCAA CGATGCGCATGTCAGCCAATGGCTGCGTCAGTATGCAAAGCAAGCGGATCTGCAACCAGCCGGCTGA
Upstream 100 bases:
>100_bases TCAACACCGGCATGGAAATCATGGTGCCCGAGTACATCACCAACGGCGAACGCGTGCTGGTCAACACCACCACGGGCGAA TTTGCCGGTCGCGCCGACTG
Downstream 100 bases:
>100_bases GATACATCGGCTGAGATGACAGCTGTGTGCCGATGCGATGGGTTACTCCTGCTGGTCGCAGCGTCGTCAGGACTCACAGC TGCGGACTGCCGCCCTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MRRVAVVVAVGVLAACSVQQAPTQAATPAPVACTDPKVEEEWLQHPAGLCGMPEEVRKLVEDYDTCEHFAGEEPYDADRR HEIEVAVAQFCTPAPARLAKLMQQYRNDAHVSQWLRQYAKQADLQPAG
Sequences:
>Translated_128_residues MRRVAVVVAVGVLAACSVQQAPTQAATPAPVACTDPKVEEEWLQHPAGLCGMPEEVRKLVEDYDTCEHFAGEEPYDADRR HEIEVAVAQFCTPAPARLAKLMQQYRNDAHVSQWLRQYAKQADLQPAG >Mature_128_residues MRRVAVVVAVGVLAACSVQQAPTQAATPAPVACTDPKVEEEWLQHPAGLCGMPEEVRKLVEDYDTCEHFAGEEPYDADRR HEIEVAVAQFCTPAPARLAKLMQQYRNDAHVSQWLRQYAKQADLQPAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14142; Mature: 14142
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVAVVVAVGVLAACSVQQAPTQAATPAPVACTDPKVEEEWLQHPAGLCGMPEEVRKLV CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHH EDYDTCEHFAGEEPYDADRRHEIEVAVAQFCTPAPARLAKLMQQYRNDAHVSQWLRQYAK HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHH QADLQPAG HCCCCCCC >Mature Secondary Structure MRRVAVVVAVGVLAACSVQQAPTQAATPAPVACTDPKVEEEWLQHPAGLCGMPEEVRKLV CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHH EDYDTCEHFAGEEPYDADRRHEIEVAVAQFCTPAPARLAKLMQQYRNDAHVSQWLRQYAK HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHH QADLQPAG HCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA