Click here to switch to the map view.

The map label for this gene is yeiP [C]

Identifier: 21242593

GI number: 21242593

Start: 2145715

End: 2146281

Strand: Reverse

Name: yeiP [C]

Synonym: XAC1849

Alternate gene names: 21242593

Gene position: 2146281-2145715 (Counterclockwise)

Preceding gene: 21242594

Following gene: 21242592

Centisome position: 41.47

GC content: 61.9

Gene sequence:

>567_bases
ATGAAAGCCAACGACATCAAGAAAGGCAACGTCGTCGAATACAACGGCGGCATTTACCAGATCCGCGACATCGAACGCAG
CTCGCCGCAGGGCCGCGGCGGCAATGTGCGCTTTCGTTTCATCATGTACAGCGTGCCGGGCGGGGTGAAAACCGATGCCA
GCTTCGATGCCGACGACAACCTGCCGGAAGTCGAGCTGCTGCGCCGGCAGTCCACGTTCTCGTACAAGGACGGCGAGGCG
TTCGTGTTCATGGACGACGAAGACTTCACCCCGTACACGCTGGATGCGGACGTGATCGGCACCGACGCCGGCTACATCAC
CGATGGTCTGACCGGCATCTATGTGCAAGTGATCGACGAGCAGCCGGTGGCCGTCCAACTGCCGCAGACGGTGACGCTGG
AAGTGGTGGAGACTCCGCCGGAATTGAAGGGCGGCACCGCCACCAAGCGGCCCAAGCCGGCCAAGCTCAACACCGGCATG
GAAATCATGGTGCCCGAGTACATCACCAACGGCGAACGCGTGCTGGTCAACACCACCACGGGCGAATTTGCCGGTCGCGC
CGACTGA

Upstream 100 bases:

>100_bases
CGGGGATTGGGGAATCGGGAATGGGGAATCGTAACGGCGCCCTGCTCTCAGCACCCCGGACCCCGGTTTTTCGATTCCCC
ATTCCCTACTCCCGATTCCC

Downstream 100 bases:

>100_bases
TGCGTCGCGTGGCTGTTGTCGTGGCCGTAGGTGTGCTGGCGGCCTGCAGCGTGCAGCAAGCACCGACGCAGGCCGCAACG
CCTGCGCCGGTGGCCTGCAC

Product: elongation factor P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MKANDIKKGNVVEYNGGIYQIRDIERSSPQGRGGNVRFRFIMYSVPGGVKTDASFDADDNLPEVELLRRQSTFSYKDGEA
FVFMDDEDFTPYTLDADVIGTDAGYITDGLTGIYVQVIDEQPVAVQLPQTVTLEVVETPPELKGGTATKRPKPAKLNTGM
EIMVPEYITNGERVLVNTTTGEFAGRAD

Sequences:

>Translated_188_residues
MKANDIKKGNVVEYNGGIYQIRDIERSSPQGRGGNVRFRFIMYSVPGGVKTDASFDADDNLPEVELLRRQSTFSYKDGEA
FVFMDDEDFTPYTLDADVIGTDAGYITDGLTGIYVQVIDEQPVAVQLPQTVTLEVVETPPELKGGTATKRPKPAKLNTGM
EIMVPEYITNGERVLVNTTTGEFAGRAD
>Mature_188_residues
MKANDIKKGNVVEYNGGIYQIRDIERSSPQGRGGNVRFRFIMYSVPGGVKTDASFDADDNLPEVELLRRQSTFSYKDGEA
FVFMDDEDFTPYTLDADVIGTDAGYITDGLTGIYVQVIDEQPVAVQLPQTVTLEVVETPPELKGGTATKRPKPAKLNTGM
EIMVPEYITNGERVLVNTTTGEFAGRAD

Specific function: Unknown

COG id: COG0231

COG function: function code J; Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the elongation factor P family

Homologues:

Organism=Escherichia coli, GI87082061, Length=188, Percent_Identity=42.5531914893617, Blast_Score=154, Evalue=4e-39,
Organism=Escherichia coli, GI1790590, Length=187, Percent_Identity=32.620320855615, Blast_Score=94, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): EFPL_XANAC (Q8PLF1)

Other databases:

- EMBL:   AE008923
- RefSeq:   NP_642175.1
- ProteinModelPortal:   Q8PLF1
- SMR:   Q8PLF1
- GeneID:   1155920
- GenomeReviews:   AE008923_GR
- KEGG:   xac:XAC1849
- NMPDR:   fig|190486.1.peg.1819
- HOGENOM:   HBG303311
- OMA:   FMDNEDY
- ProtClustDB:   PRK04542
- BioCyc:   XAXO190486:XAC1849-MONOMER
- HAMAP:   MF_00646
- InterPro:   IPR015365
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR020599
- InterPro:   IPR013185
- InterPro:   IPR011897
- InterPro:   IPR001059
- InterPro:   IPR013852
- InterPro:   IPR014722
- InterPro:   IPR008991
- Gene3D:   G3DSA:2.40.50.140
- Gene3D:   G3DSA:2.30.30.30
- PIRSF:   PIRSF005901
- SMART:   SM00841
- TIGRFAMs:   TIGR02178

Pfam domain/function: PF01132 EFP; PF08207 EFP_N; PF09285 Elong-fact-P_C; SSF50249 Nucleic_acid_OB; SSF50104 Transl_SH3_like

EC number: NA

Molecular weight: Translated: 20667; Mature: 20667

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: PS01275 EFP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKANDIKKGNVVEYNGGIYQIRDIERSSPQGRGGNVRFRFIMYSVPGGVKTDASFDADDN
CCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCC
LPEVELLRRQSTFSYKDGEAFVFMDDEDFTPYTLDADVIGTDAGYITDGLTGIYVQVIDE
CCHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEECCCEEECCCCEEECCCCEEEEEEECC
QPVAVQLPQTVTLEVVETPPELKGGTATKRPKPAKLNTGMEIMVPEYITNGERVLVNTTT
CCEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEHHEECCCCEEEEECCC
GEFAGRAD
CCCCCCCC
>Mature Secondary Structure
MKANDIKKGNVVEYNGGIYQIRDIERSSPQGRGGNVRFRFIMYSVPGGVKTDASFDADDN
CCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCC
LPEVELLRRQSTFSYKDGEAFVFMDDEDFTPYTLDADVIGTDAGYITDGLTGIYVQVIDE
CCHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEECCCEEECCCCEEECCCCEEEEEEECC
QPVAVQLPQTVTLEVVETPPELKGGTATKRPKPAKLNTGMEIMVPEYITNGERVLVNTTT
CCEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEHHEECCCCEEEEECCC
GEFAGRAD
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12024217