| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is murB
Identifier: 21242549
GI number: 21242549
Start: 2077734
End: 2078786
Strand: Reverse
Name: murB
Synonym: XAC1804
Alternate gene names: 21242549
Gene position: 2078786-2077734 (Counterclockwise)
Preceding gene: 21242550
Following gene: 21242548
Centisome position: 40.17
GC content: 65.62
Gene sequence:
>1053_bases ATGAGCGATGCAGTGCAGACAGGCTGGCAGCTGAGCGAACAGGCGCCGCTGCGTACGCTCAACACCTTCCATGTCGAAGC CACCGCGCGCTGGTTGCTCAATGTCCAAGCGCCTGAGGCATTGCCGCAGGCATTGGCTGCGCCCGAGATCGCCGGACAAC CGTTGCTGGTGCTGGGCAGCGGCAGCAATGTCTTGCTGGCCGGCGATCCGCCAGGCTGCGTGCTGTGTTTCGACAACCGC GAGACCTCCATCATCGCGCACCGTGCCGACCACGCCATCGTGCGGGCCGGCGCCGGCGTGAACTGGCATGCGCTGGTGCT GTACGCGCTGCAGCAGGGCTTGTCGGGGCTGGAGAACCTGGCTTTGATTCCGGGCACCGTGGGCGCCTGCCCGATCCAGA ACATCGGTGCGTACGGCGCGCAGGTAGGCGACTTCATCCACGTGGTGGAGGCCTTCGACCGGCATAGCCAGCAGTTCGTG CGGCTGGATGCGGCCGACTGCGCGTTCGGCTACCGCGACAGCGTGTTCAAGCAGCAGCCCGAGCGTTATCTGATCGTGGC GGTGGAATTCAATCTACCGCTGCTGCACGAACTGCGGCTGGACTACGCCGGCATTCGCGAGGAACTGGCAAGCATGGGCG CCGAGCTGGCAGGCGCGGCCGATGTGGCGCAGGCGGTGATCAACATCCGTCGCCGCAAGCTGCCGGACCCGGATGTGCTG GGCAATGCAGGCAGTTTCTTCAAGAACCCATTGCTGCCGAGCGAACAGATTGCCGCGTTGCAGGCCAGCTTTGCCGACAT GCCGGTGTATCCGGGCGAGCATGCCGGCCAGGGCAAATTGTCGGCCGCCTGGCTGATCGAGCAATGCGGCTGGAAGGGCA AGCGCGAAGGCGACGCCGGCGTGTCGCCCGACCATGCGCTGGTGCTGGTCAATTACGGCACCGCCACGGGCGCGCAGTTG CTGGATTTCGCACGACGCATCGCCGAGTCGGTGCGCGAGCGCTATTCGGTGATTCTGGAGCCGGAACCGCGCATCATCGG GGCGCATTGGTGA
Upstream 100 bases:
>100_bases ACAGCGGGTTGGTATATCGCGGCCCGCAGCTCATCGGCGAATGCGTCAACGCCATCCGACGCCGCCGCGAAGCACCCAGC GGCGGTGCGGTGTCGCCATT
Downstream 100 bases:
>100_bases CGCCAGCGCAGGTTGCGCGGCGAGCCGCGCTGTGGATGCTCACCAGTACCGTCGCCTTCGGGCTGATGGCAATCACCATC CGCCTGGCCTCGAGCACCAT
Product: UDP-N-acetylenolpyruvoylglucosamine reductase
Products: NA
Alternate protein names: UDP-N-acetylmuramate dehydrogenase
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MSDAVQTGWQLSEQAPLRTLNTFHVEATARWLLNVQAPEALPQALAAPEIAGQPLLVLGSGSNVLLAGDPPGCVLCFDNR ETSIIAHRADHAIVRAGAGVNWHALVLYALQQGLSGLENLALIPGTVGACPIQNIGAYGAQVGDFIHVVEAFDRHSQQFV RLDAADCAFGYRDSVFKQQPERYLIVAVEFNLPLLHELRLDYAGIREELASMGAELAGAADVAQAVINIRRRKLPDPDVL GNAGSFFKNPLLPSEQIAALQASFADMPVYPGEHAGQGKLSAAWLIEQCGWKGKREGDAGVSPDHALVLVNYGTATGAQL LDFARRIAESVRERYSVILEPEPRIIGAHW
Sequences:
>Translated_350_residues MSDAVQTGWQLSEQAPLRTLNTFHVEATARWLLNVQAPEALPQALAAPEIAGQPLLVLGSGSNVLLAGDPPGCVLCFDNR ETSIIAHRADHAIVRAGAGVNWHALVLYALQQGLSGLENLALIPGTVGACPIQNIGAYGAQVGDFIHVVEAFDRHSQQFV RLDAADCAFGYRDSVFKQQPERYLIVAVEFNLPLLHELRLDYAGIREELASMGAELAGAADVAQAVINIRRRKLPDPDVL GNAGSFFKNPLLPSEQIAALQASFADMPVYPGEHAGQGKLSAAWLIEQCGWKGKREGDAGVSPDHALVLVNYGTATGAQL LDFARRIAESVRERYSVILEPEPRIIGAHW >Mature_349_residues SDAVQTGWQLSEQAPLRTLNTFHVEATARWLLNVQAPEALPQALAAPEIAGQPLLVLGSGSNVLLAGDPPGCVLCFDNRE TSIIAHRADHAIVRAGAGVNWHALVLYALQQGLSGLENLALIPGTVGACPIQNIGAYGAQVGDFIHVVEAFDRHSQQFVR LDAADCAFGYRDSVFKQQPERYLIVAVEFNLPLLHELRLDYAGIREELASMGAELAGAADVAQAVINIRRRKLPDPDVLG NAGSFFKNPLLPSEQIAALQASFADMPVYPGEHAGQGKLSAAWLIEQCGWKGKREGDAGVSPDHALVLVNYGTATGAQLL DFARRIAESVRERYSVILEPEPRIIGAHW
Specific function: Cell wall formation
COG id: COG0812
COG function: function code M; UDP-N-acetylmuramate dehydrogenase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain
Homologues:
Organism=Escherichia coli, GI1790407, Length=334, Percent_Identity=42.5149700598802, Blast_Score=238, Evalue=5e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURB_XANAC (Q8PLJ3)
Other databases:
- EMBL: AE008923 - RefSeq: NP_642131.1 - ProteinModelPortal: Q8PLJ3 - SMR: Q8PLJ3 - GeneID: 1155875 - GenomeReviews: AE008923_GR - KEGG: xac:XAC1804 - NMPDR: fig|190486.1.peg.1775 - HOGENOM: HBG686573 - OMA: GAAPMQN - ProtClustDB: PRK00046 - BioCyc: XAXO190486:XAC1804-MONOMER - BRENDA: 1.1.1.158 - GO: GO:0005737 - HAMAP: MF_00037 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR003170 - InterPro: IPR011601 - InterPro: IPR006094 - Gene3D: G3DSA:3.30.465.10 - Gene3D: G3DSA:3.30.43.10 - Gene3D: G3DSA:3.90.78.10 - PANTHER: PTHR21071 - TIGRFAMs: TIGR00179
Pfam domain/function: PF01565 FAD_binding_4; PF02873 MurB_C; SSF56176 FAD-binding_2; SSF56194 MurB_C
EC number: =1.1.1.158
Molecular weight: Translated: 37701; Mature: 37570
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: PS51387 FAD_PCMH
Important sites: ACT_SITE 172-172 ACT_SITE 245-245 ACT_SITE 342-342
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDAVQTGWQLSEQAPLRTLNTFHVEATARWLLNVQAPEALPQALAAPEIAGQPLLVLGS CCCHHHCCCCCCCCCCCHHHHEEEEEEEEEEEEEECCHHHHHHHHCCCCCCCCCEEEEEC GSNVLLAGDPPGCVLCFDNRETSIIAHRADHAIVRAGAGVNWHALVLYALQQGLSGLENL CCCEEEECCCCCEEEEECCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCC ALIPGTVGACPIQNIGAYGAQVGDFIHVVEAFDRHSQQFVRLDAADCAFGYRDSVFKQQP EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHCCCCHHHHHHCCC ERYLIVAVEFNLPLLHELRLDYAGIREELASMGAELAGAADVAQAVINIRRRKLPDPDVL CEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHCCCCCCCC GNAGSFFKNPLLPSEQIAALQASFADMPVYPGEHAGQGKLSAAWLIEQCGWKGKREGDAG CCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC VSPDHALVLVNYGTATGAQLLDFARRIAESVRERYSVILEPEPRIIGAHW CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCEECCCC >Mature Secondary Structure SDAVQTGWQLSEQAPLRTLNTFHVEATARWLLNVQAPEALPQALAAPEIAGQPLLVLGS CCHHHCCCCCCCCCCCHHHHEEEEEEEEEEEEEECCHHHHHHHHCCCCCCCCCEEEEEC GSNVLLAGDPPGCVLCFDNRETSIIAHRADHAIVRAGAGVNWHALVLYALQQGLSGLENL CCCEEEECCCCCEEEEECCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCC ALIPGTVGACPIQNIGAYGAQVGDFIHVVEAFDRHSQQFVRLDAADCAFGYRDSVFKQQP EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHCCCCHHHHHHCCC ERYLIVAVEFNLPLLHELRLDYAGIREELASMGAELAGAADVAQAVINIRRRKLPDPDVL CEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHCCCCCCCC GNAGSFFKNPLLPSEQIAALQASFADMPVYPGEHAGQGKLSAAWLIEQCGWKGKREGDAG CCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC VSPDHALVLVNYGTATGAQLLDFARRIAESVRERYSVILEPEPRIIGAHW CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217