| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is ylaK [H]
Identifier: 21242502
GI number: 21242502
Start: 2014480
End: 2015877
Strand: Reverse
Name: ylaK [H]
Synonym: XAC1756
Alternate gene names: 21242502
Gene position: 2015877-2014480 (Counterclockwise)
Preceding gene: 21242503
Following gene: 21242501
Centisome position: 38.95
GC content: 62.45
Gene sequence:
>1398_bases ATGACCCGAGGCAAGCGCATCTACGTGCTGGACACCAACGTGCTGATGCACGATCCCACCGCGCTGTTCAAGTTCGAGGA ACACGATGTGTTCCTGCCGATGCAGGTGATCGAGGAGCTCGACAACGCCAAGAAGGGCACCTCCGAAGTCAGCCGCAATG CACGCCAGGTCAGCCGTTTCCTGGACGAATTGCTGGAAAACACCAACGCCGAGCAAATCCAGGCCGGCATCCTGCTCAGC CATCCGCAGGGCATCCAGCTTAAAGGCCAGGCCGCGATCGGCCGGCTGTTTTTCCAGATCAAGCCGATCGATCCGGGCCG GACCTTCGGCGAAATGCTGCCGGACAACAAGATCCTTGCCTCGGTGCTGGCGCTGCGCGAAGAAAATCCGGATGTGCCGG TCATCCTGGTGTCCAAGGACATCAACCTGCGCATCAAGGCCTACATCAGCGGCCTGGTCGCCGAGGACTACCAAAACGAC CGTGCGCTGGACGATTTCAGCCTGCTGTTCACCGGCGCCATCGAGCTGCCGGAAGATTTCTGGCAGAAGCACAACGAAGA TCTGCGCAGCTGGAACGAACGCGGCCGCACCCATTACGAAATCGTCCTGGCCGAGGACGAAGACTGGTATCCGAACCAGT ACCTGTACCTGCCCGGCGAAGACGAGGTGGAGCTGCGCGTGGCCAAGGTTGGCGGCGGCAAGGCCACCCTGTGCCTGGTC GACGATTTCCGCAGCGGCCAGCATGCGGTCTGGGGCATCGTGGCGCGCAACCGCGAGCAGAATTTCGCGCTCAACGCGCT GATGGACCCGGAGATCGACTTCGTCACCCTGCTCGGTACCGCCGGCACCGGCAAGACCTTGCTCGCACTGGCTGCAGGCC TGGCGCAGACCATGGACCAGCAGCGTTACCGGGAAATCATCATGACCCGCGCCACCGTCAGCGTGGGCGAAGATATCGGC TTCCTGCCCGGTACCGAAGAAGAAAAGATGACGCCGTGGATGGGCGCACTGACCGACAATCTGGAAGTGCTCACGCACAA CCAGGAGGGTGGCTCGTGGGGCCGAGCGGCCACCAACGACCTGCTCGCCAGTCGCATCAAGATCCGCTCGATGAACTTCA TGCGCGGCCGCACCTTCCTGTCGCGGTATCTGATCCTGGACGAGGCGCAAAACCTCACGCCCAAGCAGATGAAGACGCTG ATCACCCGTGCCGGCCCCGGCACCAAGATCGTGTGCCTCGGCAACGTCGAACAGATCGACACCCCCTACCTCACCGAAAC CACTTCGGGGCTGACCTACGCGGTGGATCGCTTCAAGGCGTGGCCGCATAGCGCGCACATCACGCTGCGTCGCGGCGAGC GCTCGCGTCTGGCCGACTTCGCTTCGGAGGTGTTGTGA
Upstream 100 bases:
>100_bases GCGCACGCCAAACAGTGACATCCCTCGCTTCCCGCGTCCTCCATCACCCTGCAGCTGCAGGCGTGATGGCTCGCCCCTGC TCCATCACTTGGAAGACCCA
Downstream 100 bases:
>100_bases TGCGCGCATATCGCGGCGCGGCGGCGCTCGCCGCGATCGCGCTGGCCGGTTGCGCCAGCACGCAGGGGCCATCCAGCGTG CCGACCAATCTCAAGAACGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 465; Mature: 464
Protein sequence:
>465_residues MTRGKRIYVLDTNVLMHDPTALFKFEEHDVFLPMQVIEELDNAKKGTSEVSRNARQVSRFLDELLENTNAEQIQAGILLS HPQGIQLKGQAAIGRLFFQIKPIDPGRTFGEMLPDNKILASVLALREENPDVPVILVSKDINLRIKAYISGLVAEDYQND RALDDFSLLFTGAIELPEDFWQKHNEDLRSWNERGRTHYEIVLAEDEDWYPNQYLYLPGEDEVELRVAKVGGGKATLCLV DDFRSGQHAVWGIVARNREQNFALNALMDPEIDFVTLLGTAGTGKTLLALAAGLAQTMDQQRYREIIMTRATVSVGEDIG FLPGTEEEKMTPWMGALTDNLEVLTHNQEGGSWGRAATNDLLASRIKIRSMNFMRGRTFLSRYLILDEAQNLTPKQMKTL ITRAGPGTKIVCLGNVEQIDTPYLTETTSGLTYAVDRFKAWPHSAHITLRRGERSRLADFASEVL
Sequences:
>Translated_465_residues MTRGKRIYVLDTNVLMHDPTALFKFEEHDVFLPMQVIEELDNAKKGTSEVSRNARQVSRFLDELLENTNAEQIQAGILLS HPQGIQLKGQAAIGRLFFQIKPIDPGRTFGEMLPDNKILASVLALREENPDVPVILVSKDINLRIKAYISGLVAEDYQND RALDDFSLLFTGAIELPEDFWQKHNEDLRSWNERGRTHYEIVLAEDEDWYPNQYLYLPGEDEVELRVAKVGGGKATLCLV DDFRSGQHAVWGIVARNREQNFALNALMDPEIDFVTLLGTAGTGKTLLALAAGLAQTMDQQRYREIIMTRATVSVGEDIG FLPGTEEEKMTPWMGALTDNLEVLTHNQEGGSWGRAATNDLLASRIKIRSMNFMRGRTFLSRYLILDEAQNLTPKQMKTL ITRAGPGTKIVCLGNVEQIDTPYLTETTSGLTYAVDRFKAWPHSAHITLRRGERSRLADFASEVL >Mature_464_residues TRGKRIYVLDTNVLMHDPTALFKFEEHDVFLPMQVIEELDNAKKGTSEVSRNARQVSRFLDELLENTNAEQIQAGILLSH PQGIQLKGQAAIGRLFFQIKPIDPGRTFGEMLPDNKILASVLALREENPDVPVILVSKDINLRIKAYISGLVAEDYQNDR ALDDFSLLFTGAIELPEDFWQKHNEDLRSWNERGRTHYEIVLAEDEDWYPNQYLYLPGEDEVELRVAKVGGGKATLCLVD DFRSGQHAVWGIVARNREQNFALNALMDPEIDFVTLLGTAGTGKTLLALAAGLAQTMDQQRYREIIMTRATVSVGEDIGF LPGTEEEKMTPWMGALTDNLEVLTHNQEGGSWGRAATNDLLASRIKIRSMNFMRGRTFLSRYLILDEAQNLTPKQMKTLI TRAGPGTKIVCLGNVEQIDTPYLTETTSGLTYAVDRFKAWPHSAHITLRRGERSRLADFASEVL
Specific function: Unknown
COG id: COG1875
COG function: function code T; Predicted ATPase related to phosphate starvation-inducible protein PhoH
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PINc domain [H]
Homologues:
Organism=Escherichia coli, GI1787257, Length=187, Percent_Identity=35.8288770053476, Blast_Score=102, Evalue=5e-23, Organism=Escherichia coli, GI145693103, Length=186, Percent_Identity=38.1720430107527, Blast_Score=96, Evalue=6e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 - InterPro: IPR006596 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 52338; Mature: 52207
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRGKRIYVLDTNVLMHDPTALFKFEEHDVFLPMQVIEELDNAKKGTSEVSRNARQVSRF CCCCCEEEEEECCEEEECCHHEEEECCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHH LDELLENTNAEQIQAGILLSHPQGIQLKGQAAIGRLFFQIKPIDPGRTFGEMLPDNKILA HHHHHHCCCHHHEEECEEEECCCCCEEECHHHEEEEEEEEEECCCCCHHHHHCCCHHHHH SVLALREENPDVPVILVSKDINLRIKAYISGLVAEDYQNDRALDDFSLLFTGAIELPEDF HHHHHHCCCCCCCEEEEECCCCEEEEEHHHHHHHHCCCCCCCCCHHHEEEECCCCCCHHH WQKHNEDLRSWNERGRTHYEIVLAEDEDWYPNQYLYLPGEDEVELRVAKVGGGKATLCLV HHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCEEECCCCCCEEEEEEEECCCEEEEEEE DDFRSGQHAVWGIVARNREQNFALNALMDPEIDFVTLLGTAGTGKTLLALAAGLAQTMDQ ECCCCCCEEEEEEEECCCCCCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH QRYREIIMTRATVSVGEDIGFLPGTEEEKMTPWMGALTDNLEVLTHNQEGGSWGRAATND HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCHHHHH LLASRIKIRSMNFMRGRTFLSRYLILDEAQNLTPKQMKTLITRAGPGTKIVCLGNVEQID HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEECCHHHCC TPYLTETTSGLTYAVDRFKAWPHSAHITLRRGERSRLADFASEVL CCCEECCCCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCC >Mature Secondary Structure TRGKRIYVLDTNVLMHDPTALFKFEEHDVFLPMQVIEELDNAKKGTSEVSRNARQVSRF CCCCEEEEEECCEEEECCHHEEEECCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHH LDELLENTNAEQIQAGILLSHPQGIQLKGQAAIGRLFFQIKPIDPGRTFGEMLPDNKILA HHHHHHCCCHHHEEECEEEECCCCCEEECHHHEEEEEEEEEECCCCCHHHHHCCCHHHHH SVLALREENPDVPVILVSKDINLRIKAYISGLVAEDYQNDRALDDFSLLFTGAIELPEDF HHHHHHCCCCCCCEEEEECCCCEEEEEHHHHHHHHCCCCCCCCCHHHEEEECCCCCCHHH WQKHNEDLRSWNERGRTHYEIVLAEDEDWYPNQYLYLPGEDEVELRVAKVGGGKATLCLV HHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCEEECCCCCCEEEEEEEECCCEEEEEEE DDFRSGQHAVWGIVARNREQNFALNALMDPEIDFVTLLGTAGTGKTLLALAAGLAQTMDQ ECCCCCCEEEEEEEECCCCCCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH QRYREIIMTRATVSVGEDIGFLPGTEEEKMTPWMGALTDNLEVLTHNQEGGSWGRAATND HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCHHHHH LLASRIKIRSMNFMRGRTFLSRYLILDEAQNLTPKQMKTLITRAGPGTKIVCLGNVEQID HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEECCHHHCC TPYLTETTSGLTYAVDRFKAWPHSAHITLRRGERSRLADFASEVL CCCEECCCCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]