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The map label for this gene is ygaF [H]

Identifier: 21242503

GI number: 21242503

Start: 2015960

End: 2016442

Strand: Reverse

Name: ygaF [H]

Synonym: XAC1757

Alternate gene names: 21242503

Gene position: 2016442-2015960 (Counterclockwise)

Preceding gene: 21242504

Following gene: 21242502

Centisome position: 38.96

GC content: 61.28

Gene sequence:

>483_bases
ATGACCGACGCTGTATTCGAACTCCCTGCTGCAACCTTCGACCTGCCGCTGGCGCTGTCCGGCGGCACCCAGACCACCCT
GCGCGACTATGCCGGCAAATGGCTGGTGCTGTACTTCTATCCGAAAGACAGCACGCCCGGCTGCACCACCGAAGGCCTGG
ACTTCAACGCCTTGCTGCCGCAGTTCAAAAAAGCAGGTGCGATGGTGCTGGGCGTCTCGCGCGATTCGGTGAAGTCGCAC
GACAACTTCTGCGCCAAGCAAGGCTTCACCTTCCCGTTGATCAGCGACAGCGATGAAGCGCTGTGCCGCGCCTTCGACGT
GATCAAGGAAAAGAACATGTACGGCAAACAGGTGCTCGGCATCGAGCGCAGCACCTTCTTGCTGTCGCCCGAAGGGCATG
TCGTGCTGGAATGGCGCAAGGTCAAGGTCGCCGGCCATGCCGAGGCCGTGCTGGCCGCAGTAAAGGCGCACGCCAAACAG
TGA

Upstream 100 bases:

>100_bases
GACGCACTTGCCAAACGCTTCCATGTGGCTGCTTATGATGGGATGGACGTCGGCCCGGCATGACCGCGCCGTACGCCCCT
CCACTTTGGGCTGAGCAACG

Downstream 100 bases:

>100_bases
CATCCCTCGCTTCCCGCGTCCTCCATCACCCTGCAGCTGCAGGCGTGATGGCTCGCCCCTGCTCCATCACTTGGAAGACC
CAATGACCCGAGGCAAGCGC

Product: bacterioferritin comigratory protein

Products: NA

Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MTDAVFELPAATFDLPLALSGGTQTTLRDYAGKWLVLYFYPKDSTPGCTTEGLDFNALLPQFKKAGAMVLGVSRDSVKSH
DNFCAKQGFTFPLISDSDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGHVVLEWRKVKVAGHAEAVLAAVKAHAKQ

Sequences:

>Translated_160_residues
MTDAVFELPAATFDLPLALSGGTQTTLRDYAGKWLVLYFYPKDSTPGCTTEGLDFNALLPQFKKAGAMVLGVSRDSVKSH
DNFCAKQGFTFPLISDSDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGHVVLEWRKVKVAGHAEAVLAAVKAHAKQ
>Mature_159_residues
TDAVFELPAATFDLPLALSGGTQTTLRDYAGKWLVLYFYPKDSTPGCTTEGLDFNALLPQFKKAGAMVLGVSRDSVKSHD
NFCAKQGFTFPLISDSDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGHVVLEWRKVKVAGHAEAVLAAVKAHAKQ

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1788825, Length=149, Percent_Identity=36.9127516778523, Blast_Score=102, Evalue=1e-23,
Organism=Drosophila melanogaster, GI17738015, Length=159, Percent_Identity=33.3333333333333, Blast_Score=68, Evalue=3e-12,

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 17484; Mature: 17353

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDAVFELPAATFDLPLALSGGTQTTLRDYAGKWLVLYFYPKDSTPGCTTEGLDFNALLP
CCCCCEECCCCCCCCEEEECCCCCHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHH
QFKKAGAMVLGVSRDSVKSHDNFCAKQGFTFPLISDSDEALCRAFDVIKEKNMYGKQVLG
HHHHCCEEEEEECCHHHHCCCCHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEC
IERSTFLLSPEGHVVLEWRKVKVAGHAEAVLAAVKAHAKQ
CCCCEEEECCCCCEEEEEEEEEECCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDAVFELPAATFDLPLALSGGTQTTLRDYAGKWLVLYFYPKDSTPGCTTEGLDFNALLP
CCCCEECCCCCCCCEEEECCCCCHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHH
QFKKAGAMVLGVSRDSVKSHDNFCAKQGFTFPLISDSDEALCRAFDVIKEKNMYGKQVLG
HHHHCCEEEEEECCHHHHCCCCHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEC
IERSTFLLSPEGHVVLEWRKVKVAGHAEAVLAAVKAHAKQ
CCCCEEEECCCCCEEEEEEEEEECCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]