Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

Click here to switch to the map view.

The map label for this gene is 21242478

Identifier: 21242478

GI number: 21242478

Start: 1988863

End: 1989237

Strand: Reverse

Name: 21242478

Synonym: XAC1729

Alternate gene names: NA

Gene position: 1989237-1988863 (Counterclockwise)

Preceding gene: 21242479

Following gene: 21242473

Centisome position: 38.44

GC content: 64.8

Gene sequence:

>375_bases
ATGCCTTTAAGTCAGGAACACCCCGATTACACCTATGCGCTGCGCGCGGCCGACGGCCGCCACGCCAAGGTGAACGACCA
GATCCTGCAGCAGAGCTTTATCCTGATGCCGGATGAGCTGGTGGACTACTGGCCGGTCCAGGCGCTGGAGCAACTCCAGG
CCAGTCATATGGAGGCGGTGCTGGCACTCAATCCAGCCGTCATCCTGCTCGGCACCGGCGAGCGCCAGTTATTCCCCAAG
ACCGACGTGCTGGCGGCCTGCCTGACCCGCGGCATCGGCCTGGAAGCGATGACCAATTCCGCCGCCGCACGCACCTACAA
CGTACTGGCCAGCGAAGGCCGGCGGGTGGCGTTGGCGATGGTGTTGCCGGGCTGA

Upstream 100 bases:

>100_bases
TGCGCTGGTGCAGCGCATCGGCCACGTCGCCATTCTGTACCGCCCCAGCAAGGAAAAGCGCCAGATCGTGCTGCCGCGCG
GCTGAGCCAACGAGTTCGTC

Downstream 100 bases:

>100_bases
ATCGGGAATCGGGAGAGCAGGCGGAGCACGCTTTCGCTGTCAAGCAGAATTTGCGCGAACAGTATCAGTAAGCACTCACC
TCGTTGCCCGCGCCCCCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MPLSQEHPDYTYALRAADGRHAKVNDQILQQSFILMPDELVDYWPVQALEQLQASHMEAVLALNPAVILLGTGERQLFPK
TDVLAACLTRGIGLEAMTNSAAARTYNVLASEGRRVALAMVLPG

Sequences:

>Translated_124_residues
MPLSQEHPDYTYALRAADGRHAKVNDQILQQSFILMPDELVDYWPVQALEQLQASHMEAVLALNPAVILLGTGERQLFPK
TDVLAACLTRGIGLEAMTNSAAARTYNVLASEGRRVALAMVLPG
>Mature_123_residues
PLSQEHPDYTYALRAADGRHAKVNDQILQQSFILMPDELVDYWPVQALEQLQASHMEAVLALNPAVILLGTGERQLFPKT
DVLAACLTRGIGLEAMTNSAAARTYNVLASEGRRVALAMVLPG

Specific function: Unknown

COG id: COG3737

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007523 [H]

Pfam domain/function: PF04430 DUF498 [H]

EC number: NA

Molecular weight: Translated: 13530; Mature: 13399

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLSQEHPDYTYALRAADGRHAKVNDQILQQSFILMPDELVDYWPVQALEQLQASHMEAV
CCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHH
LALNPAVILLGTGERQLFPKTDVLAACLTRGIGLEAMTNSAAARTYNVLASEGRRVALAM
EECCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHCCCCEEEEEE
VLPG
EECC
>Mature Secondary Structure 
PLSQEHPDYTYALRAADGRHAKVNDQILQQSFILMPDELVDYWPVQALEQLQASHMEAV
CCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHH
LALNPAVILLGTGERQLFPKTDVLAACLTRGIGLEAMTNSAAARTYNVLASEGRRVALAM
EECCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHCCCCEEEEEE
VLPG
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1694206 [H]