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The map label for this gene is yfcN [C]

Identifier: 21242473

GI number: 21242473

Start: 1985215

End: 1985754

Strand: Reverse

Name: yfcN [C]

Synonym: XAC1724

Alternate gene names: 21242473

Gene position: 1985754-1985215 (Counterclockwise)

Preceding gene: 21242478

Following gene: 21242463

Centisome position: 38.37

GC content: 67.41

Gene sequence:

>540_bases
ATGTCGCATCCTGAAGACGAAGACGACGGCGCGTTGTTCCGCGCAGCGATCGGCGCGGTCAAGCCGATTCGTGAAGTCGC
CCCACCGGCCAATGCCAAGCCGCGGCCCAAGCCCCGCGCGCGCATGGCCGAGCGCGATGACGCCGAAGCGCACACCGAAT
TTGCGCGCCTGCTGCGCGACAGCGCGCCGCTGGAAGCGGGCGACACCGCCAGCTATCGGCGCGAGAACCTTCCCACCCGC
GTGTTCCAACGGCTCAAGCGCGGGCAATTCTCGGTGCAGGACGAACTGGACCTGCACGGCGCCACCGCAGCCCAGGCCGA
ATCGTTGCTGCGCCAGTTCCTGCTGGAAGCACATGCGCACGAACATGGCTGCGTACGCATCATCCACGGCAAGGGACTGC
AATCGGACAACGGCGCGCCTGTGCTGAAGAACCTCATGGACCGGCTGCTGCGTCAACGCAACGATGTGCTGGCGTTTCAT
TCCGCGCCGCCGACGCAGGGCGGCACCGGGGCGCTGCTGGTGTTGCTGGCGCGGCGATAG

Upstream 100 bases:

>100_bases
TGGGACTCCTCGGAAAACCGGGCCATGATACCGGATGCGTCCCGCGCCTTCGCGCTTGATCTTCGCGTGCGTCTGCGCTT
GGACCGGGTACGCTGTGCCA

Downstream 100 bases:

>100_bases
GCCGATGGTGACGCGCGATTGATTCGGAATGGCAGCGATTGCGCGCGGCGACGTGTTGTCTGGAAAGTCTTTCGCGCATG
GCTCGCCTGATGCGAACCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MSHPEDEDDGALFRAAIGAVKPIREVAPPANAKPRPKPRARMAERDDAEAHTEFARLLRDSAPLEAGDTASYRRENLPTR
VFQRLKRGQFSVQDELDLHGATAAQAESLLRQFLLEAHAHEHGCVRIIHGKGLQSDNGAPVLKNLMDRLLRQRNDVLAFH
SAPPTQGGTGALLVLLARR

Sequences:

>Translated_179_residues
MSHPEDEDDGALFRAAIGAVKPIREVAPPANAKPRPKPRARMAERDDAEAHTEFARLLRDSAPLEAGDTASYRRENLPTR
VFQRLKRGQFSVQDELDLHGATAAQAESLLRQFLLEAHAHEHGCVRIIHGKGLQSDNGAPVLKNLMDRLLRQRNDVLAFH
SAPPTQGGTGALLVLLARR
>Mature_178_residues
SHPEDEDDGALFRAAIGAVKPIREVAPPANAKPRPKPRARMAERDDAEAHTEFARLLRDSAPLEAGDTASYRRENLPTRV
FQRLKRGQFSVQDELDLHGATAAQAESLLRQFLLEAHAHEHGCVRIIHGKGLQSDNGAPVLKNLMDRLLRQRNDVLAFHS
APPTQGGTGALLVLLARR

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Smr domain [H]

Homologues:

Organism=Escherichia coli, GI1788671, Length=176, Percent_Identity=30.6818181818182, Blast_Score=67, Evalue=7e-13,
Organism=Escherichia coli, GI1787602, Length=174, Percent_Identity=29.3103448275862, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002625
- InterPro:   IPR022990 [H]

Pfam domain/function: PF01713 Smr [H]

EC number: NA

Molecular weight: Translated: 19727; Mature: 19595

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHPEDEDDGALFRAAIGAVKPIREVAPPANAKPRPKPRARMAERDDAEAHTEFARLLRD
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHH
SAPLEAGDTASYRRENLPTRVFQRLKRGQFSVQDELDLHGATAAQAESLLRQFLLEAHAH
CCCCCCCCCHHHHHHCCCHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCC
EHGCVRIIHGKGLQSDNGAPVLKNLMDRLLRQRNDVLAFHSAPPTQGGTGALLVLLARR
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHEEECC
>Mature Secondary Structure 
SHPEDEDDGALFRAAIGAVKPIREVAPPANAKPRPKPRARMAERDDAEAHTEFARLLRD
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHH
SAPLEAGDTASYRRENLPTRVFQRLKRGQFSVQDELDLHGATAAQAESLLRQFLLEAHAH
CCCCCCCCCHHHHHHCCCHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCC
EHGCVRIIHGKGLQSDNGAPVLKNLMDRLLRQRNDVLAFHSAPPTQGGTGALLVLLARR
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA