| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242456
Identifier: 21242456
GI number: 21242456
Start: 1967386
End: 1967886
Strand: Direct
Name: 21242456
Synonym: XAC1707
Alternate gene names: NA
Gene position: 1967386-1967886 (Clockwise)
Preceding gene: 77748606
Following gene: 21242459
Centisome position: 38.01
GC content: 62.48
Gene sequence:
>501_bases ATGCAATTTCAAGAACGCAGCGAGAGCATCAAGCAGTTGGCCGAATTGATTCGCGGGGTGGACATCGCGATGTTCACCAC CGTCTCGGCCGACGGCAAATTGGTGAGCCGCCCGCTGGGGACGCAGGAAGTCGAGTTCGATGGCGACCTGTGGTTCGCCA CCGCCGCCGACAGCCCGAAAGTAGCCGAAATCGCCGCCGATCCGCGCGTCAACGTGGCTTATGCGTCGGCGTCGAAGAAC ACCTATGTCTCGGTGGCCGGCACTGCACGCGTGGTCCACGACCGGGCCAAGATCGACGAGCTGTGGTCGCCGGCGATGAA GGTGTTTTTCCCGGCCGGCAAGGACGATGCGAACCTGCGTTTGATCCACGTGCGTGCCGAATCGGCCGAATACTGGGACG GCCCCAGCGGGTTGCTCGGCAAGGCGCTGTATTTCGTGATGACGGCGGTCACCGACGATACCGGCAGCCTGTCGGACAAC CGCGTGGTCGATCTGAAGTAA
Upstream 100 bases:
>100_bases CGCTGCCGCGTGCCGCGAGCTGGACGTGACCTTGGTGTGATTCACGTCGCTTTGCGCAGCGATCCGCTGTGATGCGTGCA CATCCATCAGGAAAACCAGC
Downstream 100 bases:
>100_bases CCGCGTCGCAAGCGACGCGCCGGACGCGCTGCGCTCAGCGCCATGCGTCCGGCCACCAATCGCGAATCAGATCCACCAGC TGGTCGGAGGTGACGCCGAA
Product: general stress protein
Products: NA
Alternate protein names: Stress Protein; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Pyridoxamine 5-Phosphate Oxidase-Related Protein; General Stress
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MQFQERSESIKQLAELIRGVDIAMFTTVSADGKLVSRPLGTQEVEFDGDLWFATAADSPKVAEIAADPRVNVAYASASKN TYVSVAGTARVVHDRAKIDELWSPAMKVFFPAGKDDANLRLIHVRAESAEYWDGPSGLLGKALYFVMTAVTDDTGSLSDN RVVDLK
Sequences:
>Translated_166_residues MQFQERSESIKQLAELIRGVDIAMFTTVSADGKLVSRPLGTQEVEFDGDLWFATAADSPKVAEIAADPRVNVAYASASKN TYVSVAGTARVVHDRAKIDELWSPAMKVFFPAGKDDANLRLIHVRAESAEYWDGPSGLLGKALYFVMTAVTDDTGSLSDN RVVDLK >Mature_166_residues MQFQERSESIKQLAELIRGVDIAMFTTVSADGKLVSRPLGTQEVEFDGDLWFATAADSPKVAEIAADPRVNVAYASASKN TYVSVAGTARVVHDRAKIDELWSPAMKVFFPAGKDDANLRLIHVRAESAEYWDGPSGLLGKALYFVMTAVTDDTGSLSDN RVVDLK
Specific function: Unknown
COG id: COG3871
COG function: function code R; Uncharacterized stress protein (general stress protein 26)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18070; Mature: 18070
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFQERSESIKQLAELIRGVDIAMFTTVSADGKLVSRPLGTQEVEFDGDLWFATAADSPK CCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEECCCCCCEEEECCCEEEEECCCCCC VAEIAADPRVNVAYASASKNTYVSVAGTARVVHDRAKIDELWSPAMKVFFPAGKDDANLR EEEEECCCCEEEEEECCCCCEEEEEECCCEEHHHHHHHHHHHCCCEEEEECCCCCCCCEE LIHVRAESAEYWDGPSGLLGKALYFVMTAVTDDTGSLSDNRVVDLK EEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC >Mature Secondary Structure MQFQERSESIKQLAELIRGVDIAMFTTVSADGKLVSRPLGTQEVEFDGDLWFATAADSPK CCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEECCCCCCEEEECCCEEEEECCCCCC VAEIAADPRVNVAYASASKNTYVSVAGTARVVHDRAKIDELWSPAMKVFFPAGKDDANLR EEEEECCCCEEEEEECCCCCEEEEEECCCEEHHHHHHHHHHHCCCEEEEECCCCCCCCEE LIHVRAESAEYWDGPSGLLGKALYFVMTAVTDDTGSLSDNRVVDLK EEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA