| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is yhbW [H]
Identifier: 77748606
GI number: 77748606
Start: 1966324
End: 1967325
Strand: Direct
Name: yhbW [H]
Synonym: XAC1706
Alternate gene names: 77748606
Gene position: 1966324-1967325 (Clockwise)
Preceding gene: 21242453
Following gene: 21242456
Centisome position: 37.99
GC content: 67.56
Gene sequence:
>1002_bases ATGACCCCCATTTCCGTGCTCGACCTGGCGCCGGTCTGCGAAGGCAGCGACACCACCCACGCCTTCGCCAACATGCTCGA TCTGGCCCAGCACGCCGAGCGTTGGGGCTATCAGCGCTACTGGCTGGCCGAACACCACAACATGCCAGGCATCGCCAGCG CTGCCACCGCCGTGCTGATCGGTCACGTCGCCGGCGGCACCAAGGCCATTCGCGTGGGTGCCGGCGGCATCATGTTGCCC AACCACGCGCCGCTGCAGGTGGCCGAACAATTCGGCACGCTGGCATCGCTCTATCCGCAGCGTATCGACCTGGGCCTGGG CCGCGCGCCGGGCACCGATCAGCCCACCGCCCGCGCATTGCGCCGCTATTTCGACAGCGCCGATCACTTTCCGCAGGACG TGGCCGAATTGATGCGCTATTTCGCGCCGGCGGTGCCGGGGCAGCTGGTACAGGCCGTGCCCGGCGCCGGGCTGGAGGTG CCGGTGTGGCTGTTGGGATCGAGCCTGTTCAGCGCACGCCTTGCCGCCGCGATGGGCTTGTCGTTCGCGTTCGCCTCGCA TTTCGCGCCGGACGCGATGGACGAAGCGGTGGCGATCTATCGCCGCGAATTCCGCCCGTCCGCACAGCTCGCCAAGCCGC ACGTGATGCTGGCCCTGAATGTGGTGGCGGCCGAGACGCAAGCGCAGGCACGGCGTCTGTTCACTACCCAGCAGCAAAGC TTCGTCAATCTGCGTCGCGGCAAGCCGGGCAAGATCCCGCCGCCCATCGACGATATCGACAGCTTCTGGCAACCGCATGA GCGTGTCGGGGTGGAGCGTGCACTGGCCTGCACGGTGCTCGGCGATGCCGAGCAGATTGCGCGCGGCGTGGCCGAGTTCA TCGAGCGCCACACGCCCGACGAGCTGTTGTTCACCGCCAACATCTACGACCACGCCGCGCGTCTGCGCTCCTTCGAAATC GCCGCTGCCGCGTGCCGCGAGCTGGACGTGACCTTGGTGTGA
Upstream 100 bases:
>100_bases CTGCTGGAATGCTGTAATCCCTCACGGCACCCAACACGCCGCTGGCAATGCCGCCGGGCCAGCCCCATCTCTGGCATATC ACTCTTCCCGGAGTCATCCG
Downstream 100 bases:
>100_bases TTCACGTCGCTTTGCGCAGCGATCCGCTGTGATGCGTGCACATCCATCAGGAAAACCAGCATGCAATTTCAAGAACGCAG CGAGAGCATCAAGCAGTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MTPISVLDLAPVCEGSDTTHAFANMLDLAQHAERWGYQRYWLAEHHNMPGIASAATAVLIGHVAGGTKAIRVGAGGIMLP NHAPLQVAEQFGTLASLYPQRIDLGLGRAPGTDQPTARALRRYFDSADHFPQDVAELMRYFAPAVPGQLVQAVPGAGLEV PVWLLGSSLFSARLAAAMGLSFAFASHFAPDAMDEAVAIYRREFRPSAQLAKPHVMLALNVVAAETQAQARRLFTTQQQS FVNLRRGKPGKIPPPIDDIDSFWQPHERVGVERALACTVLGDAEQIARGVAEFIERHTPDELLFTANIYDHAARLRSFEI AAAACRELDVTLV
Sequences:
>Translated_333_residues MTPISVLDLAPVCEGSDTTHAFANMLDLAQHAERWGYQRYWLAEHHNMPGIASAATAVLIGHVAGGTKAIRVGAGGIMLP NHAPLQVAEQFGTLASLYPQRIDLGLGRAPGTDQPTARALRRYFDSADHFPQDVAELMRYFAPAVPGQLVQAVPGAGLEV PVWLLGSSLFSARLAAAMGLSFAFASHFAPDAMDEAVAIYRREFRPSAQLAKPHVMLALNVVAAETQAQARRLFTTQQQS FVNLRRGKPGKIPPPIDDIDSFWQPHERVGVERALACTVLGDAEQIARGVAEFIERHTPDELLFTANIYDHAARLRSFEI AAAACRELDVTLV >Mature_332_residues TPISVLDLAPVCEGSDTTHAFANMLDLAQHAERWGYQRYWLAEHHNMPGIASAATAVLIGHVAGGTKAIRVGAGGIMLPN HAPLQVAEQFGTLASLYPQRIDLGLGRAPGTDQPTARALRRYFDSADHFPQDVAELMRYFAPAVPGQLVQAVPGAGLEVP VWLLGSSLFSARLAAAMGLSFAFASHFAPDAMDEAVAIYRREFRPSAQLAKPHVMLALNVVAAETQAQARRLFTTQQQSF VNLRRGKPGKIPPPIDDIDSFWQPHERVGVERALACTVLGDAEQIARGVAEFIERHTPDELLFTANIYDHAARLRSFEIA AAACRELDVTLV
Specific function: Unknown
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]
Homologues:
Organism=Escherichia coli, GI1789551, Length=326, Percent_Identity=54.601226993865, Blast_Score=375, Evalue=1e-105,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 - InterPro: IPR019949 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 36162; Mature: 36030
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPISVLDLAPVCEGSDTTHAFANMLDLAQHAERWGYQRYWLAEHHNMPGIASAATAVLI CCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCCCCHHHHHHHHHH GHVAGGTKAIRVGAGGIMLPNHAPLQVAEQFGTLASLYPQRIDLGLGRAPGTDQPTARAL HHHCCCCEEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH RRYFDSADHFPQDVAELMRYFAPAVPGQLVQAVPGAGLEVPVWLLGSSLFSARLAAAMGL HHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH SFAFASHFAPDAMDEAVAIYRREFRPSAQLAKPHVMLALNVVAAETQAQARRLFTTQQQS HHHHHHHCCCHHHHHHHHHHHHHCCCCHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH FVNLRRGKPGKIPPPIDDIDSFWQPHERVGVERALACTVLGDAEQIARGVAEFIERHTPD HHHHHCCCCCCCCCCHHHHHHHCCCHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC ELLFTANIYDHAARLRSFEIAAAACRELDVTLV CEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TPISVLDLAPVCEGSDTTHAFANMLDLAQHAERWGYQRYWLAEHHNMPGIASAATAVLI CCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCCCCHHHHHHHHHH GHVAGGTKAIRVGAGGIMLPNHAPLQVAEQFGTLASLYPQRIDLGLGRAPGTDQPTARAL HHHCCCCEEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH RRYFDSADHFPQDVAELMRYFAPAVPGQLVQAVPGAGLEVPVWLLGSSLFSARLAAAMGL HHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH SFAFASHFAPDAMDEAVAIYRREFRPSAQLAKPHVMLALNVVAAETQAQARRLFTTQQQS HHHHHHHCCCHHHHHHHHHHHHHCCCCHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH FVNLRRGKPGKIPPPIDDIDSFWQPHERVGVERALACTVLGDAEQIARGVAEFIERHTPD HHHHHCCCCCCCCCCHHHHHHHCCCHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC ELLFTANIYDHAARLRSFEIAAAACRELDVTLV CEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]