| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is hepA [H]
Identifier: 21242453
GI number: 21242453
Start: 1962684
End: 1964339
Strand: Direct
Name: hepA [H]
Synonym: XAC1704
Alternate gene names: 21242453
Gene position: 1962684-1964339 (Clockwise)
Preceding gene: 21242452
Following gene: 77748606
Centisome position: 37.92
GC content: 66.55
Gene sequence:
>1656_bases ATGCCGACGATTGCACTTTACGTCGGGTTATCGCTGGCTGCCGCGTTGGCCGGCAGCGTGGTGGCGGTGTGCCTGCTGCC GCTGGTGCAACCAGGCCACAGCGTGCAACTGGCGGGCTATCGTCTGGCCTTGCCGGGCGGGCTGGCGATGCAGGCGGGCG TGTTCATTGCAGTGAGCCTGCTGTTTGCCGCGCTGCGCTGGCAGAGCGCACGGCTGGCCGCGCAGCTGACCAGCCGCTAT GCCATCGGTCTGCGCGGACGCGTGCATGCGGCGTTGATCGATGCGCCATTGCCGGCCTTGTCCGGGGCCAGCTCGGCAGA AATCGCCAACGTGCTCACGTATAACATCGAGATCGCCACGCAAGGCTTCAGCGCTGTGCTGCAGCTGCTGGTCGCGGCCA TCACTGCGCTGGTGAGCGTGTGCATCGCGGGCCTGATCGCACCTGGGCTGTTGATCACCACCCCATTGCTGGCGGTGCTG GCATGGTTGGGTCTGCGCTTTTCCCGCAGTCACGCACACGCACGCATCAGCCGCGCGTATGTGGCGGACATGACGCGGCT GTTCTGGCTGAGCGAAGATTTCCCGCGTCGCTTGCGCCACGTACGCTCGTTTCAGCGCGAAGATCTCGAAACCCGCCGTT ACGAGCGCATTTCGGCGCGACTGGGGCACGGGTATGCGCAGCAGCAAGCACTGGTTGCCGGCAGCCGCCTGCTGCTGGAA CTCATCGCGGTGGTCGCTATCGCCGGCATCCTGGTACTGGCCAATCGATGGCAGGGGGGCGATCGTGCTGCCCTGATCGC CGTCAGTCTGTTGCTCGGCCGTCTGTTGCCGTACCTGGTCACCACGCGGCAGAGCATTCAGCAATTGCGTTCGGCGTGGC CGGCGCTGCAGCTGTGGCGCCGCTATGTCGACCTGGGCGCTGCGCGTGTGCACGTTCCGGAAGAAATGGCCGAACCATTG CCGGCTGCGCTGCATATCGAACACATCGGGCTGGCGCTGCCGCTGCCCCAACTCGCGATCGAATCGATATTGCTGGTGCC AGGTCAGATGACCCTGGTGGTCGGTGCCTCCGGCGTGGGCAAGAGCAGTCTGATGGATGTGCTCTCCGGTCAGGCGCCGC CGGCGCAGTTCGTGGCGCACATGGGCGGACGTCGGCTGACATTCTCGGCATATCGACATCTGGTGCGGCACAGCGCCTAC ATCGGCCAGGGCGTGCGGCCGTGGCAGCACACAGTGCGCGAATGCCTGCAGTGGGCGTTGCCGGGTGCCTCTGACGCTCG CATGTGTGAGGCGCTTGTAGATGTCGGCATGTGTGCACGGCTGCAGCGCGACGCGCAAGGTCTGGACACGCCGATTCATG CGCAGGGCGGGCGCCTGTCCGGCGGCGAGTTGCAACGCTTGCTGCTGGCGCAGGTATTGCTGCGTCGGCCGACGCTGGCC GTCCTGGATGAAGCAACCAGCGCCCTGGATGCCGATGCCGAACATCGGGTGCTGAGCACCCTGCGCGCGCGCCTACCGCA GAGCGCGCTGGTCGTGGTGTCGCATCGCACTAGCCTGGCCGCGGTGGCAGACCGCACGGTGACACTGGGCAGCGCACCTC TTGAACCGGGGCATGCCGGCACGGCGGAACTGGCGGCGAAGCTCGGCGCGCGATGA
Upstream 100 bases:
>100_bases CGCCTGCATGTTGCGCACGGATGAGCGGCCGGCGATGACAGCCGGCCAGCGCATGCGCGCTGCATTGCACCGGTTCGCGA GCACTCTGGTGCCGACAGAC
Downstream 100 bases:
>100_bases CGCGTCATCGGCTGGCAACCGGTCGGGGGATCAACCAGGGGCGGGGGCGGTGCAGCGGCCTGTGGCGATAGAGAGGTGGC GGATCAGATCCGCCGGCTGA
Product: ABC transporter ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 551; Mature: 550
Protein sequence:
>551_residues MPTIALYVGLSLAAALAGSVVAVCLLPLVQPGHSVQLAGYRLALPGGLAMQAGVFIAVSLLFAALRWQSARLAAQLTSRY AIGLRGRVHAALIDAPLPALSGASSAEIANVLTYNIEIATQGFSAVLQLLVAAITALVSVCIAGLIAPGLLITTPLLAVL AWLGLRFSRSHAHARISRAYVADMTRLFWLSEDFPRRLRHVRSFQREDLETRRYERISARLGHGYAQQQALVAGSRLLLE LIAVVAIAGILVLANRWQGGDRAALIAVSLLLGRLLPYLVTTRQSIQQLRSAWPALQLWRRYVDLGAARVHVPEEMAEPL PAALHIEHIGLALPLPQLAIESILLVPGQMTLVVGASGVGKSSLMDVLSGQAPPAQFVAHMGGRRLTFSAYRHLVRHSAY IGQGVRPWQHTVRECLQWALPGASDARMCEALVDVGMCARLQRDAQGLDTPIHAQGGRLSGGELQRLLLAQVLLRRPTLA VLDEATSALDADAEHRVLSTLRARLPQSALVVVSHRTSLAAVADRTVTLGSAPLEPGHAGTAELAAKLGAR
Sequences:
>Translated_551_residues MPTIALYVGLSLAAALAGSVVAVCLLPLVQPGHSVQLAGYRLALPGGLAMQAGVFIAVSLLFAALRWQSARLAAQLTSRY AIGLRGRVHAALIDAPLPALSGASSAEIANVLTYNIEIATQGFSAVLQLLVAAITALVSVCIAGLIAPGLLITTPLLAVL AWLGLRFSRSHAHARISRAYVADMTRLFWLSEDFPRRLRHVRSFQREDLETRRYERISARLGHGYAQQQALVAGSRLLLE LIAVVAIAGILVLANRWQGGDRAALIAVSLLLGRLLPYLVTTRQSIQQLRSAWPALQLWRRYVDLGAARVHVPEEMAEPL PAALHIEHIGLALPLPQLAIESILLVPGQMTLVVGASGVGKSSLMDVLSGQAPPAQFVAHMGGRRLTFSAYRHLVRHSAY IGQGVRPWQHTVRECLQWALPGASDARMCEALVDVGMCARLQRDAQGLDTPIHAQGGRLSGGELQRLLLAQVLLRRPTLA VLDEATSALDADAEHRVLSTLRARLPQSALVVVSHRTSLAAVADRTVTLGSAPLEPGHAGTAELAAKLGAR >Mature_550_residues PTIALYVGLSLAAALAGSVVAVCLLPLVQPGHSVQLAGYRLALPGGLAMQAGVFIAVSLLFAALRWQSARLAAQLTSRYA IGLRGRVHAALIDAPLPALSGASSAEIANVLTYNIEIATQGFSAVLQLLVAAITALVSVCIAGLIAPGLLITTPLLAVLA WLGLRFSRSHAHARISRAYVADMTRLFWLSEDFPRRLRHVRSFQREDLETRRYERISARLGHGYAQQQALVAGSRLLLEL IAVVAIAGILVLANRWQGGDRAALIAVSLLLGRLLPYLVTTRQSIQQLRSAWPALQLWRRYVDLGAARVHVPEEMAEPLP AALHIEHIGLALPLPQLAIESILLVPGQMTLVVGASGVGKSSLMDVLSGQAPPAQFVAHMGGRRLTFSAYRHLVRHSAYI GQGVRPWQHTVRECLQWALPGASDARMCEALVDVGMCARLQRDAQGLDTPIHAQGGRLSGGELQRLLLAQVLLRRPTLAV LDEATSALDADAEHRVLSTLRARLPQSALVVVSHRTSLAAVADRTVTLGSAPLEPGHAGTAELAAKLGAR
Specific function: Acts early in the process of morphological differentiation of heterocysts [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI9955966, Length=370, Percent_Identity=24.3243243243243, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI45243524, Length=370, Percent_Identity=24.3243243243243, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI156105685, Length=497, Percent_Identity=23.5412474849095, Blast_Score=93, Evalue=7e-19, Organism=Homo sapiens, GI9955968, Length=188, Percent_Identity=28.7234042553192, Blast_Score=88, Evalue=3e-17, Organism=Homo sapiens, GI42490749, Length=343, Percent_Identity=24.7813411078717, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI9665248, Length=358, Percent_Identity=24.8603351955307, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI255708477, Length=237, Percent_Identity=26.1603375527426, Blast_Score=80, Evalue=7e-15, Organism=Homo sapiens, GI9961250, Length=226, Percent_Identity=24.3362831858407, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI9961252, Length=226, Percent_Identity=24.3362831858407, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI4505771, Length=226, Percent_Identity=24.3362831858407, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI73747915, Length=226, Percent_Identity=28.3185840707965, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI9955963, Length=188, Percent_Identity=27.1276595744681, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI73747917, Length=186, Percent_Identity=29.5698924731183, Blast_Score=73, Evalue=7e-13, Organism=Homo sapiens, GI42741659, Length=177, Percent_Identity=27.1186440677966, Blast_Score=73, Evalue=9e-13, Organism=Homo sapiens, GI171184400, Length=475, Percent_Identity=22.7368421052632, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI148612844, Length=159, Percent_Identity=30.8176100628931, Blast_Score=71, Evalue=2e-12, Organism=Escherichia coli, GI1787143, Length=493, Percent_Identity=22.7180527383367, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1787113, Length=220, Percent_Identity=32.7272727272727, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1787112, Length=172, Percent_Identity=33.7209302325581, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI1786654, Length=208, Percent_Identity=29.3269230769231, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1787772, Length=218, Percent_Identity=28.4403669724771, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI1786653, Length=292, Percent_Identity=25.3424657534247, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1788225, Length=204, Percent_Identity=30.3921568627451, Blast_Score=64, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17511077, Length=509, Percent_Identity=23.5756385068762, Blast_Score=102, Evalue=4e-22, Organism=Caenorhabditis elegans, GI71992290, Length=365, Percent_Identity=25.4794520547945, Blast_Score=102, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17569145, Length=194, Percent_Identity=31.4432989690722, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17533971, Length=370, Percent_Identity=24.0540540540541, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17565938, Length=544, Percent_Identity=22.2426470588235, Blast_Score=88, Evalue=9e-18, Organism=Caenorhabditis elegans, GI17558664, Length=179, Percent_Identity=31.2849162011173, Blast_Score=86, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17569143, Length=194, Percent_Identity=31.4432989690722, Blast_Score=86, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17543740, Length=372, Percent_Identity=24.7311827956989, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17567265, Length=183, Percent_Identity=32.2404371584699, Blast_Score=84, Evalue=3e-16, Organism=Caenorhabditis elegans, GI193211017, Length=198, Percent_Identity=30.8080808080808, Blast_Score=83, Evalue=4e-16, Organism=Caenorhabditis elegans, GI193211015, Length=198, Percent_Identity=30.8080808080808, Blast_Score=83, Evalue=4e-16, Organism=Caenorhabditis elegans, GI115533592, Length=355, Percent_Identity=25.0704225352113, Blast_Score=83, Evalue=4e-16, Organism=Caenorhabditis elegans, GI115535101, Length=203, Percent_Identity=31.0344827586207, Blast_Score=82, Evalue=8e-16, Organism=Caenorhabditis elegans, GI115534520, Length=235, Percent_Identity=28.0851063829787, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71996809, Length=198, Percent_Identity=30.3030303030303, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI212646699, Length=215, Percent_Identity=28.8372093023256, Blast_Score=80, Evalue=3e-15, Organism=Caenorhabditis elegans, GI71992285, Length=222, Percent_Identity=30.1801801801802, Blast_Score=80, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17567269, Length=216, Percent_Identity=30.5555555555556, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI193208177, Length=214, Percent_Identity=28.9719626168224, Blast_Score=79, Evalue=5e-15, Organism=Caenorhabditis elegans, GI25146777, Length=187, Percent_Identity=27.2727272727273, Blast_Score=78, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71996550, Length=346, Percent_Identity=24.2774566473988, Blast_Score=77, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193202349, Length=209, Percent_Identity=28.2296650717703, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71984940, Length=189, Percent_Identity=26.984126984127, Blast_Score=73, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17541710, Length=217, Percent_Identity=26.2672811059908, Blast_Score=73, Evalue=5e-13, Organism=Caenorhabditis elegans, GI193209708, Length=211, Percent_Identity=25.5924170616114, Blast_Score=70, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6323959, Length=223, Percent_Identity=26.457399103139, Blast_Score=84, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6324985, Length=347, Percent_Identity=25.3602305475504, Blast_Score=82, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6323217, Length=201, Percent_Identity=29.8507462686567, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI281363262, Length=224, Percent_Identity=31.6964285714286, Blast_Score=96, Evalue=7e-20, Organism=Drosophila melanogaster, GI24653245, Length=224, Percent_Identity=31.6964285714286, Blast_Score=96, Evalue=7e-20, Organism=Drosophila melanogaster, GI24641565, Length=459, Percent_Identity=26.5795206971678, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI23397593, Length=474, Percent_Identity=23.2067510548523, Blast_Score=90, Evalue=5e-18, Organism=Drosophila melanogaster, GI21357907, Length=182, Percent_Identity=29.6703296703297, Blast_Score=79, Evalue=8e-15, Organism=Drosophila melanogaster, GI24659289, Length=210, Percent_Identity=30.4761904761905, Blast_Score=75, Evalue=9e-14, Organism=Drosophila melanogaster, GI85726357, Length=225, Percent_Identity=26.2222222222222, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI17136662, Length=200, Percent_Identity=29, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI19920928, Length=512, Percent_Identity=23.6328125, Blast_Score=67, Evalue=4e-11, Organism=Drosophila melanogaster, GI24650986, Length=480, Percent_Identity=21.4583333333333, Blast_Score=65, Evalue=9e-11, Organism=Drosophila melanogaster, GI21358185, Length=480, Percent_Identity=21.4583333333333, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017940 - InterPro: IPR001140 - InterPro: IPR011527 - InterPro: IPR003593 [H]
Pfam domain/function: PF00664 ABC_membrane; PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 58869; Mature: 58738
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2 ; PS50929 ABC_TM1F
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTIALYVGLSLAAALAGSVVAVCLLPLVQPGHSVQLAGYRLALPGGLAMQAGVFIAVSL CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEECCCCHHHHHHHHHHHHH LFAALRWQSARLAAQLTSRYAIGLRGRVHAALIDAPLPALSGASSAEIANVLTYNIEIAT HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHEEEEEEEC QGFSAVLQLLVAAITALVSVCIAGLIAPGLLITTPLLAVLAWLGLRFSRSHAHARISRAY CCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH VADMTRLFWLSEDFPRRLRHVRSFQREDLETRRYERISARLGHGYAQQQALVAGSRLLLE HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LIAVVAIAGILVLANRWQGGDRAALIAVSLLLGRLLPYLVTTRQSIQQLRSAWPALQLWR HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH RYVDLGAARVHVPEEMAEPLPAALHIEHIGLALPLPQLAIESILLVPGQMTLVVGASGVG HHHHCCCCEEECCHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEECCCCC KSSLMDVLSGQAPPAQFVAHMGGRRLTFSAYRHLVRHSAYIGQGVRPWQHTVRECLQWAL HHHHHHHHCCCCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC PGASDARMCEALVDVGMCARLQRDAQGLDTPIHAQGGRLSGGELQRLLLAQVLLRRPTLA CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHH VLDEATSALDADAEHRVLSTLRARLPQSALVVVSHRTSLAAVADRTVTLGSAPLEPGHAG HHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCEEECCCCCCCCCCC TAELAAKLGAR HHHHHHHHCCC >Mature Secondary Structure PTIALYVGLSLAAALAGSVVAVCLLPLVQPGHSVQLAGYRLALPGGLAMQAGVFIAVSL CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEECCCCHHHHHHHHHHHHH LFAALRWQSARLAAQLTSRYAIGLRGRVHAALIDAPLPALSGASSAEIANVLTYNIEIAT HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHEEEEEEEC QGFSAVLQLLVAAITALVSVCIAGLIAPGLLITTPLLAVLAWLGLRFSRSHAHARISRAY CCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH VADMTRLFWLSEDFPRRLRHVRSFQREDLETRRYERISARLGHGYAQQQALVAGSRLLLE HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LIAVVAIAGILVLANRWQGGDRAALIAVSLLLGRLLPYLVTTRQSIQQLRSAWPALQLWR HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH RYVDLGAARVHVPEEMAEPLPAALHIEHIGLALPLPQLAIESILLVPGQMTLVVGASGVG HHHHCCCCEEECCHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEECCCCC KSSLMDVLSGQAPPAQFVAHMGGRRLTFSAYRHLVRHSAYIGQGVRPWQHTVRECLQWAL HHHHHHHHCCCCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC PGASDARMCEALVDVGMCARLQRDAQGLDTPIHAQGGRLSGGELQRLLLAQVLLRRPTLA CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHH VLDEATSALDADAEHRVLSTLRARLPQSALVVVSHRTSLAAVADRTVTLGSAPLEPGHAG HHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCEEECCCCCCCCCCC TAELAAKLGAR HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2111805; 11759840 [H]