Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

Click here to switch to the map view.

The map label for this gene is 21242446

Identifier: 21242446

GI number: 21242446

Start: 1953834

End: 1955021

Strand: Direct

Name: 21242446

Synonym: XAC1697

Alternate gene names: NA

Gene position: 1953834-1955021 (Clockwise)

Preceding gene: 21242445

Following gene: 21242447

Centisome position: 37.75

GC content: 67.09

Gene sequence:

>1188_bases
GTGGAGCGGTCGATGGCCATGGCCGATGTCTGCCTGCAAGGCGCACGCGCGATCACCCAGGCGGGTCCGTCGCGTGCCGC
AGTGACGATCCGCGCGGGGCGCTTCGGCGGCACGCTCGGCACCGGCACCGTGCGCCTGGATCTGCAAGGGCATGTACTGG
CGCCGGGCCTGATCAATGCGCACGAACATCTGCAGGTCAACTGCGTGCCACCGCTGCCGCAGGCCACGCCGTTCGCCAAC
AGCTATGCGTGGATCGAGTCATTTCAGGCGCATTTTCAGCACCCGGACGTGGCCGCCGCACTACGCGTGCCCAAGGCGGT
ACGGCTGCGCCATGGCGGTTTGAAGAACCTGTTGGCCGGCGTCACCTGCGTGGCCCAGCACGACCCATGGCATGCCACGC
TGGACGAGGCGAATTTCCCGGTGAGCCTGCTGCGCGACTTCGGCTGGAGCTACGCATTGGGGTGGGCAGGCTATGGCCCG
CCCGTACAAGGCAGCTTTGCCGCAACCCTGCCAGCGCATCCCTGGATGATCCATCTGGCCGAAGGCACCGATGCGGTGGC
GCGTGCCGAGCTCGACGAACTCGACCGGCTCGGCTGCCTGGCCGCCAACACGGTGTTGATCCACGGCGTAGGCATGGGTG
AGCACGATATCGAGCGGGTGATCGCGCGTGGCGCGGCCGTGGTGTGGTGTCCTTCCAGCAATCAGGCGCTGCTCGGCCGC
ACGCTCGATCCGTGGCGCTTGTGCATGGCCGGCCGACTGGCGCTGGGCAACGATTCGCGCATCAGCGGCGCGCGCGACCT
GCTGGAAGAACTGCAGATCGCCAGCCAGAGCGGGTTGGCACCGGACCAATTGCTTGGCATGGTCACCGGTGACTGCGCGC
GTATCCTGCGCATGGCAACGCGTGGGCGTATTGCGCCTGGAGCCACTGCAGATGTGTTGATCGTGCGCGACCGCGGTGGC
GAGCCTGCCAGCAGCATCGTCGGTTGCACGCGCAGCGACTTGCGTGCGGTGATTCGCGATGGCAGGCCGCGCATCGCCGA
TCTGGATTTTGCGTCGTGGTTCGACGCGGCCGGCATCCGGACCGTGCCGGTGTTGCTGGACGGACGGCCCAAATTGCTCG
ATGCCACGCTGGCCGATCCGGCGGTGCTAGCGCTCGAGCCCGGTCTTAGAGCGTGTTATGTACGTTGA

Upstream 100 bases:

>100_bases
CCTGTCCGAGCGCCTGGGGCGCTGCGACGACCGGTGGGGCGGGCTGCCGCTGCTGCGCGACATGGGCGATCACTTTTTGA
TCGTGATGCGCAAGCGCTGA

Downstream 100 bases:

>100_bases
GGTGAGTGCGAAGCGTCCTGTGGCGCGTCGAGACAAGGCGTGCGCTGCGGCCCAGGCTGGCCCGCCTGGGCAAGGCGCGC
AACGCGGTCTCGGCGCGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: Metal-Dependent Hydrolase; Deaminase; Metal Dependent Amidohydrolase; Chlorohydrolase Family Protein

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MERSMAMADVCLQGARAITQAGPSRAAVTIRAGRFGGTLGTGTVRLDLQGHVLAPGLINAHEHLQVNCVPPLPQATPFAN
SYAWIESFQAHFQHPDVAAALRVPKAVRLRHGGLKNLLAGVTCVAQHDPWHATLDEANFPVSLLRDFGWSYALGWAGYGP
PVQGSFAATLPAHPWMIHLAEGTDAVARAELDELDRLGCLAANTVLIHGVGMGEHDIERVIARGAAVVWCPSSNQALLGR
TLDPWRLCMAGRLALGNDSRISGARDLLEELQIASQSGLAPDQLLGMVTGDCARILRMATRGRIAPGATADVLIVRDRGG
EPASSIVGCTRSDLRAVIRDGRPRIADLDFASWFDAAGIRTVPVLLDGRPKLLDATLADPAVLALEPGLRACYVR

Sequences:

>Translated_395_residues
MERSMAMADVCLQGARAITQAGPSRAAVTIRAGRFGGTLGTGTVRLDLQGHVLAPGLINAHEHLQVNCVPPLPQATPFAN
SYAWIESFQAHFQHPDVAAALRVPKAVRLRHGGLKNLLAGVTCVAQHDPWHATLDEANFPVSLLRDFGWSYALGWAGYGP
PVQGSFAATLPAHPWMIHLAEGTDAVARAELDELDRLGCLAANTVLIHGVGMGEHDIERVIARGAAVVWCPSSNQALLGR
TLDPWRLCMAGRLALGNDSRISGARDLLEELQIASQSGLAPDQLLGMVTGDCARILRMATRGRIAPGATADVLIVRDRGG
EPASSIVGCTRSDLRAVIRDGRPRIADLDFASWFDAAGIRTVPVLLDGRPKLLDATLADPAVLALEPGLRACYVR
>Mature_395_residues
MERSMAMADVCLQGARAITQAGPSRAAVTIRAGRFGGTLGTGTVRLDLQGHVLAPGLINAHEHLQVNCVPPLPQATPFAN
SYAWIESFQAHFQHPDVAAALRVPKAVRLRHGGLKNLLAGVTCVAQHDPWHATLDEANFPVSLLRDFGWSYALGWAGYGP
PVQGSFAATLPAHPWMIHLAEGTDAVARAELDELDRLGCLAANTVLIHGVGMGEHDIERVIARGAAVVWCPSSNQALLGR
TLDPWRLCMAGRLALGNDSRISGARDLLEELQIASQSGLAPDQLLGMVTGDCARILRMATRGRIAPGATADVLIVRDRGG
EPASSIVGCTRSDLRAVIRDGRPRIADLDFASWFDAAGIRTVPVLLDGRPKLLDATLADPAVLALEPGLRACYVR

Specific function: Unknown

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42048; Mature: 42048

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERSMAMADVCLQGARAITQAGPSRAAVTIRAGRFGGTLGTGTVRLDLQGHVLAPGLINA
CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEECCCEEEEEECCCEECCCCCCC
HEHLQVNCVPPLPQATPFANSYAWIESFQAHFQHPDVAAALRVPKAVRLRHGGLKNLLAG
CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHCCHHHHHHCCCHHHHHHH
VTCVAQHDPWHATLDEANFPVSLLRDFGWSYALGWAGYGPPVQGSFAATLPAHPWMIHLA
EEEEECCCCCEEECCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCEEEECCCCCEEEEEE
EGTDAVARAELDELDRLGCLAANTVLIHGVGMGEHDIERVIARGAAVVWCPSSNQALLGR
CCCCHHHHHHHHHHHHHHHHEECEEEEEECCCCHHHHHHHHHCCCEEEEECCCCCEEECC
TLDPWRLCMAGRLALGNDSRISGARDLLEELQIASQSGLAPDQLLGMVTGDCARILRMAT
CCCHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
RGRIAPGATADVLIVRDRGGEPASSIVGCTRSDLRAVIRDGRPRIADLDFASWFDAAGIR
CCCCCCCCCEEEEEEECCCCCCHHHHHCCCHHHHHHHHHCCCCCEECCCHHHHHCCCCCE
TVPVLLDGRPKLLDATLADPAVLALEPGLRACYVR
EEEEEECCCCCEEECCCCCCEEEEECCCCCEEECC
>Mature Secondary Structure
MERSMAMADVCLQGARAITQAGPSRAAVTIRAGRFGGTLGTGTVRLDLQGHVLAPGLINA
CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEECCCEEEEEECCCEECCCCCCC
HEHLQVNCVPPLPQATPFANSYAWIESFQAHFQHPDVAAALRVPKAVRLRHGGLKNLLAG
CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHCCHHHHHHCCCHHHHHHH
VTCVAQHDPWHATLDEANFPVSLLRDFGWSYALGWAGYGPPVQGSFAATLPAHPWMIHLA
EEEEECCCCCEEECCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCEEEECCCCCEEEEEE
EGTDAVARAELDELDRLGCLAANTVLIHGVGMGEHDIERVIARGAAVVWCPSSNQALLGR
CCCCHHHHHHHHHHHHHHHHEECEEEEEECCCCHHHHHHHHHCCCEEEEECCCCCEEECC
TLDPWRLCMAGRLALGNDSRISGARDLLEELQIASQSGLAPDQLLGMVTGDCARILRMAT
CCCHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
RGRIAPGATADVLIVRDRGGEPASSIVGCTRSDLRAVIRDGRPRIADLDFASWFDAAGIR
CCCCCCCCCEEEEEEECCCCCCHHHHHCCCHHHHHHHHHCCCCCEECCCHHHHHCCCCCE
TVPVLLDGRPKLLDATLADPAVLALEPGLRACYVR
EEEEEECCCCCEEECCCCCCEEEEECCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA