| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is wzxE [H]
Identifier: 21242441
GI number: 21242441
Start: 1948482
End: 1949735
Strand: Direct
Name: wzxE [H]
Synonym: XAC1692
Alternate gene names: 21242441
Gene position: 1948482-1949735 (Clockwise)
Preceding gene: 21242440
Following gene: 21242442
Centisome position: 37.65
GC content: 63.72
Gene sequence:
>1254_bases ATGAATCTCATGCGCAGCAGCGCCTACACCGGCGTTGCGACGCTGGCCAAGCTGCTGGCGGCATTGGTGGTGATCAAGCT GGTCGCCGTCTATGCTGGGCCGCAGGGTGTGGGCCGGCTTGGCCAGTTCCTCAACCTGATGTCGGTGCTGGCGGTATTGG CCGGTGGCGGCATCAGTACCGGCATCGTCAAGTATGTGGCGCAGTACCGCGACGATGCCCCCGCATTGGCGCGCCTGCTG AGTGCGGCGCTGTGGTACGCATTCTGCGCGGCCTGCGTGATCGCACTGCTGGCGATGGCGTTCAGTGGAGCGATTGCCGA GCGCCTGTTGGGCGATGCGAGCTACCGTCCGCTGATCTGCGTGTTGGCGATCGCGCAGCTGGGAATCGCACTGCTCAATT TCATATTGGCGCTGATCAACGGCTTCATGGATGTGCGACGGCTCGTCTTCGTGCAAGTGACAGGCGCCGTGCTGAGCGTT GCCTTGGTGGCGTGGCTCTCCAGCCGGGCGCAATTACATGGAGCGCTGCTGGCGCTGGTCCTGGGGCAGGTGCTGTGGCT GCTGGCTGCGGTCCCGGCGCTGCGGCGTAGCCCCTATTTTCAGCCTGCAATGTGGCGGATGCGCTTTGACGCGCAGATGA CCCGTCGGCTGGCGGCATTTTCGCTGATGACGCTTACCTCGACACTGATGCCGCAGCTGGTGACCCTTGCGGTGCGCAAT CATCTGGCGCTGCGGTTCGGCTGGGAGCAAGTGGGTTACTGGCAGGCGGTAAGCCGGGTTTCCGATGCCTATCTGCTGTT CTTCACCACCGCCATCAACGTGTACTACCTGCCCAAGCTGGCCTCGCTGCAAGGCGCTGCGGCGCTGGGCAGCGAGCTGC GCAGCGCGTATCGCCACGTCATGCCGGCGGTGATCGTGGCGGCGCTGGGCGTCTATGTATGCCGCGATTGGGTGACCTGG CTCCTGTTCGATCCCCAATTTGCCGCTGCGGCGCCCTTGTACGGCCCGCAGCTGCTGGGAGACGTGGTCAAGATCGCGGC GTTCGTGCTGTCGTACGTGATGCTCGCCAAGGCAATGACGCGGCTGTTCGTGATCTCCGAATGCGTGTTCGCAGCGAGCT ATCTGGCGCTGGTGTACGTGTTCACCGCGCGGTTCGGGCTGATCGGTGCGATGTATGCCTTCGCCGCCAACTACGTGCTG TATCTGTTGTTCAACATCGTGGTGGTGCGGCGCTATCTGGAGCGGGCGGCATGA
Upstream 100 bases:
>100_bases AGCTGCATCGGGAAGTCCTGAGCCTGCCGATGGGGCCGGCGCTGGACGATGCAGCAGTTGCGCATGTGATCGCGGCCTGT CAATCGTTCGGCAGCAACAT
Downstream 100 bases:
>100_bases ACGATCGGGCGTGTGTATCGGCACGTACACGCTGGCCGCTGGTGTCGGTGCTGATTCCGGCGTTCAACCATGCGCGTTTC GTGCAGCGTTGCCTGGATAG
Product: lipopolysaccharide biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MNLMRSSAYTGVATLAKLLAALVVIKLVAVYAGPQGVGRLGQFLNLMSVLAVLAGGGISTGIVKYVAQYRDDAPALARLL SAALWYAFCAACVIALLAMAFSGAIAERLLGDASYRPLICVLAIAQLGIALLNFILALINGFMDVRRLVFVQVTGAVLSV ALVAWLSSRAQLHGALLALVLGQVLWLLAAVPALRRSPYFQPAMWRMRFDAQMTRRLAAFSLMTLTSTLMPQLVTLAVRN HLALRFGWEQVGYWQAVSRVSDAYLLFFTTAINVYYLPKLASLQGAAALGSELRSAYRHVMPAVIVAALGVYVCRDWVTW LLFDPQFAAAAPLYGPQLLGDVVKIAAFVLSYVMLAKAMTRLFVISECVFAASYLALVYVFTARFGLIGAMYAFAANYVL YLLFNIVVVRRYLERAA
Sequences:
>Translated_417_residues MNLMRSSAYTGVATLAKLLAALVVIKLVAVYAGPQGVGRLGQFLNLMSVLAVLAGGGISTGIVKYVAQYRDDAPALARLL SAALWYAFCAACVIALLAMAFSGAIAERLLGDASYRPLICVLAIAQLGIALLNFILALINGFMDVRRLVFVQVTGAVLSV ALVAWLSSRAQLHGALLALVLGQVLWLLAAVPALRRSPYFQPAMWRMRFDAQMTRRLAAFSLMTLTSTLMPQLVTLAVRN HLALRFGWEQVGYWQAVSRVSDAYLLFFTTAINVYYLPKLASLQGAAALGSELRSAYRHVMPAVIVAALGVYVCRDWVTW LLFDPQFAAAAPLYGPQLLGDVVKIAAFVLSYVMLAKAMTRLFVISECVFAASYLALVYVFTARFGLIGAMYAFAANYVL YLLFNIVVVRRYLERAA >Mature_417_residues MNLMRSSAYTGVATLAKLLAALVVIKLVAVYAGPQGVGRLGQFLNLMSVLAVLAGGGISTGIVKYVAQYRDDAPALARLL SAALWYAFCAACVIALLAMAFSGAIAERLLGDASYRPLICVLAIAQLGIALLNFILALINGFMDVRRLVFVQVTGAVLSV ALVAWLSSRAQLHGALLALVLGQVLWLLAAVPALRRSPYFQPAMWRMRFDAQMTRRLAAFSLMTLTSTLMPQLVTLAVRN HLALRFGWEQVGYWQAVSRVSDAYLLFFTTAINVYYLPKLASLQGAAALGSELRSAYRHVMPAVIVAALGVYVCRDWVTW LLFDPQFAAAAPLYGPQLLGDVVKIAAFVLSYVMLAKAMTRLFVISECVFAASYLALVYVFTARFGLIGAMYAFAANYVL YLLFNIVVVRRYLERAA
Specific function: Synthesis of enterobacterial common antigen (ECA). [C]
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790227, Length=407, Percent_Identity=34.1523341523341, Blast_Score=215, Evalue=3e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002797 [H]
Pfam domain/function: PF01943 Polysacc_synt [H]
EC number: NA
Molecular weight: Translated: 45381; Mature: 45381
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLMRSSAYTGVATLAKLLAALVVIKLVAVYAGPQGVGRLGQFLNLMSVLAVLAGGGIST CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHH GIVKYVAQYRDDAPALARLLSAALWYAFCAACVIALLAMAFSGAIAERLLGDASYRPLIC HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH VLAIAQLGIALLNFILALINGFMDVRRLVFVQVTGAVLSVALVAWLSSRAQLHGALLALV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGQVLWLLAAVPALRRSPYFQPAMWRMRFDAQMTRRLAAFSLMTLTSTLMPQLVTLAVRN HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLALRFGWEQVGYWQAVSRVSDAYLLFFTTAINVYYLPKLASLQGAAALGSELRSAYRHV HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MPAVIVAALGVYVCRDWVTWLLFDPQFAAAAPLYGPQLLGDVVKIAAFVLSYVMLAKAMT HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RLFVISECVFAASYLALVYVFTARFGLIGAMYAFAANYVLYLLFNIVVVRRYLERAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNLMRSSAYTGVATLAKLLAALVVIKLVAVYAGPQGVGRLGQFLNLMSVLAVLAGGGIST CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHH GIVKYVAQYRDDAPALARLLSAALWYAFCAACVIALLAMAFSGAIAERLLGDASYRPLIC HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH VLAIAQLGIALLNFILALINGFMDVRRLVFVQVTGAVLSVALVAWLSSRAQLHGALLALV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGQVLWLLAAVPALRRSPYFQPAMWRMRFDAQMTRRLAAFSLMTLTSTLMPQLVTLAVRN HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLALRFGWEQVGYWQAVSRVSDAYLLFFTTAINVYYLPKLASLQGAAALGSELRSAYRHV HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MPAVIVAALGVYVCRDWVTWLLFDPQFAAAAPLYGPQLLGDVVKIAAFVLSYVMLAKAMT HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RLFVISECVFAASYLALVYVFTARFGLIGAMYAFAANYVLYLLFNIVVVRRYLERAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1379743; 9278503 [H]