| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is eryC1 [H]
Identifier: 21242440
GI number: 21242440
Start: 1947373
End: 1948485
Strand: Direct
Name: eryC1 [H]
Synonym: XAC1691
Alternate gene names: 21242440
Gene position: 1947373-1948485 (Clockwise)
Preceding gene: 21242439
Following gene: 21242441
Centisome position: 37.63
GC content: 63.16
Gene sequence:
>1113_bases ATGGATGTGCCTTTCCTGGATTTGCGTGCAGTCAATGCACGCTATGCGGATGAGCTCAAAACCGCAGCGGCACGTGTGAT CGATGCCGGCTGGTATGTGCTCGGTCAAGAGCTGGCCGCATTCGAAGAAGAATTCGCCAGTTATTGCGGCACCACGCATG CAGTCGGCGTGGGCAACGGGCTGGATGCGTTGGGGTTGATCCTGCGCGGCTACCGTGAGCTGGGGGTGTTGCGCGAAGGC GACGAAATCATCGTGCCGGCCAACACCTTCATCGCGACATTTCTGGCGATCAGCCAGAACCATCTGGTGCTGGTGCCGGT CGAGCCGGACCCGGTCACTTTCAACATCGACCCGGCAAGGGTGGAAAAGTCGATCGGGCCACGCACACGCGCCATCATGG CAGTGCACCTGTATGGGCAATTGGCCGAGATGCAGGCCCTGCAGACCCTGGCCCATCGCTACGGCCTGCTGCTGATCGAG GATGCCGCGCAAGCGCACGGGGCAAGCGCACGGGGGCAGCGTGCCGGTGCCTTCGGCGATGCGGCGGCCTTCAGTTTCTT CCCGACCAAGAATCTGGGCGCATTGGGCGATGGCGGCGCAGTCACGACGTCGGATGCGCGTCTGGCCGAGCGCATTCGCG CGCTGCGTAACTACGGCTCGGAAGTGAAGTATCACCATCTCTGCCAGGGGGTGAACTCGCGTCTGGATGAAATGCAGGCT GCTTTCCTGCGCGTCAAGCTGGGCTATCTGGAGGACGAGATCGCGCTGCGGCGTGCAGTGGCACGGCGATATCTGCACGG TATCTGCAACCCGCTGATCGTGCTGCCCGCGCCGGTGGCCGAGCAACAGCACGTCTGGCATCTGTTCGTGGTACGCAGCC TGCAGCGCGATGCCTTGCAGGCACATCTGTTGCGGCAGGGCATCCACACGCAGATTCATTACCCGGTGCCGCCGCACCGG CAGCCGGCATACGCCACTTTGGGCGAGGCCTGCCTGCCGCTGAGCGAACAGCTGCATCGGGAAGTCCTGAGCCTGCCGAT GGGGCCGGCGCTGGACGATGCAGCAGTTGCGCATGTGATCGCGGCCTGTCAATCGTTCGGCAGCAACATATGA
Upstream 100 bases:
>100_bases CCGAACAGGGCGGGCAGGTACTCAACGAAGGCCTGGTGGAACAAAAGGAACGCTTCGGCGCGCGCGCCGTGGTACAGGAT GTCTATCGATGGTTGATGTA
Downstream 100 bases:
>100_bases ATCTCATGCGCAGCAGCGCCTACACCGGCGTTGCGACGCTGGCCAAGCTGCTGGCGGCATTGGTGGTGATCAAGCTGGTC GCCGTCTATGCTGGGCCGCA
Product: aminotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MDVPFLDLRAVNARYADELKTAAARVIDAGWYVLGQELAAFEEEFASYCGTTHAVGVGNGLDALGLILRGYRELGVLREG DEIIVPANTFIATFLAISQNHLVLVPVEPDPVTFNIDPARVEKSIGPRTRAIMAVHLYGQLAEMQALQTLAHRYGLLLIE DAAQAHGASARGQRAGAFGDAAAFSFFPTKNLGALGDGGAVTTSDARLAERIRALRNYGSEVKYHHLCQGVNSRLDEMQA AFLRVKLGYLEDEIALRRAVARRYLHGICNPLIVLPAPVAEQQHVWHLFVVRSLQRDALQAHLLRQGIHTQIHYPVPPHR QPAYATLGEACLPLSEQLHREVLSLPMGPALDDAAVAHVIAACQSFGSNI
Sequences:
>Translated_370_residues MDVPFLDLRAVNARYADELKTAAARVIDAGWYVLGQELAAFEEEFASYCGTTHAVGVGNGLDALGLILRGYRELGVLREG DEIIVPANTFIATFLAISQNHLVLVPVEPDPVTFNIDPARVEKSIGPRTRAIMAVHLYGQLAEMQALQTLAHRYGLLLIE DAAQAHGASARGQRAGAFGDAAAFSFFPTKNLGALGDGGAVTTSDARLAERIRALRNYGSEVKYHHLCQGVNSRLDEMQA AFLRVKLGYLEDEIALRRAVARRYLHGICNPLIVLPAPVAEQQHVWHLFVVRSLQRDALQAHLLRQGIHTQIHYPVPPHR QPAYATLGEACLPLSEQLHREVLSLPMGPALDDAAVAHVIAACQSFGSNI >Mature_370_residues MDVPFLDLRAVNARYADELKTAAARVIDAGWYVLGQELAAFEEEFASYCGTTHAVGVGNGLDALGLILRGYRELGVLREG DEIIVPANTFIATFLAISQNHLVLVPVEPDPVTFNIDPARVEKSIGPRTRAIMAVHLYGQLAEMQALQTLAHRYGLLLIE DAAQAHGASARGQRAGAFGDAAAFSFFPTKNLGALGDGGAVTTSDARLAERIRALRNYGSEVKYHHLCQGVNSRLDEMQA AFLRVKLGYLEDEIALRRAVARRYLHGICNPLIVLPAPVAEQQHVWHLFVVRSLQRDALQAHLLRQGIHTQIHYPVPPHR QPAYATLGEACLPLSEQLHREVLSLPMGPALDDAAVAHVIAACQSFGSNI
Specific function: Sensor protein that transfers the signal of environmental stimuli to the regulatory region of target genes to activate or repress transcription of erythromycin biosynthesis genes (Potential) [H]
COG id: COG0399
COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the degT/dnrJ/eryC1 family [H]
Homologues:
Organism=Escherichia coli, GI145693159, Length=365, Percent_Identity=30.6849315068493, Blast_Score=152, Evalue=4e-38, Organism=Escherichia coli, GI2367285, Length=269, Percent_Identity=30.1115241635688, Blast_Score=110, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000653 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]
EC number: NA
Molecular weight: Translated: 40307; Mature: 40307
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVPFLDLRAVNARYADELKTAAARVIDAGWYVLGQELAAFEEEFASYCGTTHAVGVGNG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCC LDALGLILRGYRELGVLREGDEIIVPANTFIATFLAISQNHLVLVPVEPDPVTFNIDPAR HHHHHHHHHHHHHHCCEECCCEEEECCHHHHHHHHHHCCCCEEEEEECCCCEEEECCHHH VEKSIGPRTRAIMAVHLYGQLAEMQALQTLAHRYGLLLIEDAAQAHGASARGQRAGAFGD HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECHHHHCCCCCCCCCCCCCCC AAAFSFFPTKNLGALGDGGAVTTSDARLAERIRALRNYGSEVKYHHLCQGVNSRLDEMQA HHHEEECCCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH AFLRVKLGYLEDEIALRRAVARRYLHGICNPLIVLPAPVAEQQHVWHLFVVRSLQRDALQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH AHLLRQGIHTQIHYPVPPHRQPAYATLGEACLPLSEQLHREVLSLPMGPALDDAAVAHVI HHHHHHCCCCEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHH AACQSFGSNI HHHHHHCCCC >Mature Secondary Structure MDVPFLDLRAVNARYADELKTAAARVIDAGWYVLGQELAAFEEEFASYCGTTHAVGVGNG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCC LDALGLILRGYRELGVLREGDEIIVPANTFIATFLAISQNHLVLVPVEPDPVTFNIDPAR HHHHHHHHHHHHHHCCEECCCEEEECCHHHHHHHHHHCCCCEEEEEECCCCEEEECCHHH VEKSIGPRTRAIMAVHLYGQLAEMQALQTLAHRYGLLLIEDAAQAHGASARGQRAGAFGD HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECHHHHCCCCCCCCCCCCCCC AAAFSFFPTKNLGALGDGGAVTTSDARLAERIRALRNYGSEVKYHHLCQGVNSRLDEMQA HHHEEECCCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH AFLRVKLGYLEDEIALRRAVARRYLHGICNPLIVLPAPVAEQQHVWHLFVVRSLQRDALQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH AHLLRQGIHTQIHYPVPPHRQPAYATLGEACLPLSEQLHREVLSLPMGPALDDAAVAHVI HHHHHHCCCCEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHH AACQSFGSNI HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2575703 [H]