| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is ppnK
Identifier: 21242345
GI number: 21242345
Start: 1841786
End: 1842562
Strand: Direct
Name: ppnK
Synonym: XAC1595
Alternate gene names: 21242345
Gene position: 1841786-1842562 (Clockwise)
Preceding gene: 21242344
Following gene: 21242346
Centisome position: 35.59
GC content: 65.89
Gene sequence:
>777_bases ATGACCGCACCACCTCGCATCGCTTTTCTTGCCAGCCCCGCCGAGCCGGCGGTGGCCGCGCGTGCGCGCCTTACGCAGCG CTATGGCGACCATGCGCTGGACAGCGCCGACATCGTCTGTGCGCTGGGCGGCGATGGGTTCATGCTGCAAACGCTGCACC GGCATGGCGCCTCCGACAAGCCGGTGTTCGGCATGAAGCTGGGCTCGGTCGGCTTTTTGATGAACCAGTACCGCGACAAC GAGGACGACCTGCTCGAGCGCCTGCAGCGCGCCGAGCCGGCGTATCTGCGGCCGCTGGAAATGCAGGTGCAGACCGAATC CGGGGCCAGTGCTGGCTCGCTGGCCTACAACGAGGTCTCGCTGTTGCGGCAGACCCGGCAGGCCGCGCATCTCAGCATTG ATCTCAACGGCCAGACCCGCATCGCCGAGCTGATCGGCGATGGCGTGATGGTGGCCACGCCGGCCGGCAGCACGGCGTAC AACTATTCCGCGCACGGGCCGATCCTGCCGCTGGGCTCGCATACGTTGGCGCTGACGCCGATCGCACCGTATCGTCCGCG ACGCTGGCGCGGCGCCATCCTCAAGGCAGATACCGAAGTGCGCTTTCGCGTGCTCGACCCGTACAAGCGCCCGGTCAGCG TCACCGCCGACTCGCACGAAATTCGCGACGTGGTCGAAGTGACCATCCGCGAATCCGCGCAGCGCCAGGTCACGTTGTTG TTCGATCCCGAACACAATCTCGAAGAGCGCATCTTCAGCGAGCAGTTTGCGGTATGA
Upstream 100 bases:
>100_bases TGCCGTGCATGAGGGGGAGGGTGGGACATGAGCGCAACGGACCCACAACAAGCCCAGCACGGGGCTGCGGTATGCTGATT CGCATGCTCTGGAGTCAACG
Downstream 100 bases:
>100_bases AAGGCGGGGATCTGGGATTCGAGATTCGGGATTGGCAACGGCAGCAGCGTGCCACGTCGTCTTTAGAATCGCGCGCACGC GCTACGATGCTGCGCGGATG
Product: inorganic polyphosphate/ATP-NAD kinase
Products: NA
Alternate protein names: Poly(P)/ATP NAD kinase
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MTAPPRIAFLASPAEPAVAARARLTQRYGDHALDSADIVCALGGDGFMLQTLHRHGASDKPVFGMKLGSVGFLMNQYRDN EDDLLERLQRAEPAYLRPLEMQVQTESGASAGSLAYNEVSLLRQTRQAAHLSIDLNGQTRIAELIGDGVMVATPAGSTAY NYSAHGPILPLGSHTLALTPIAPYRPRRWRGAILKADTEVRFRVLDPYKRPVSVTADSHEIRDVVEVTIRESAQRQVTLL FDPEHNLEERIFSEQFAV
Sequences:
>Translated_258_residues MTAPPRIAFLASPAEPAVAARARLTQRYGDHALDSADIVCALGGDGFMLQTLHRHGASDKPVFGMKLGSVGFLMNQYRDN EDDLLERLQRAEPAYLRPLEMQVQTESGASAGSLAYNEVSLLRQTRQAAHLSIDLNGQTRIAELIGDGVMVATPAGSTAY NYSAHGPILPLGSHTLALTPIAPYRPRRWRGAILKADTEVRFRVLDPYKRPVSVTADSHEIRDVVEVTIRESAQRQVTLL FDPEHNLEERIFSEQFAV >Mature_257_residues TAPPRIAFLASPAEPAVAARARLTQRYGDHALDSADIVCALGGDGFMLQTLHRHGASDKPVFGMKLGSVGFLMNQYRDNE DDLLERLQRAEPAYLRPLEMQVQTESGASAGSLAYNEVSLLRQTRQAAHLSIDLNGQTRIAELIGDGVMVATPAGSTAYN YSAHGPILPLGSHTLALTPIAPYRPRRWRGAILKADTEVRFRVLDPYKRPVSVTADSHEIRDVVEVTIRESAQRQVTLLF DPEHNLEERIFSEQFAV
Specific function: Catalyzes the phosphorylation of NAD to NADP. Utilizes ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus
COG id: COG0061
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD kinase family
Homologues:
Organism=Escherichia coli, GI1788968, Length=192, Percent_Identity=30.7291666666667, Blast_Score=69, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6325068, Length=177, Percent_Identity=29.9435028248588, Blast_Score=68, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6320794, Length=188, Percent_Identity=29.7872340425532, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PPNK_XANAC (Q8PM39)
Other databases:
- EMBL: AE008923 - RefSeq: NP_641927.1 - ProteinModelPortal: Q8PM39 - GeneID: 1155666 - GenomeReviews: AE008923_GR - KEGG: xac:XAC1595 - NMPDR: fig|190486.1.peg.1571 - HOGENOM: HBG294544 - OMA: VIHPLLM - ProtClustDB: PRK04761 - BioCyc: XAXO190486:XAC1595-MONOMER - BRENDA: 2.7.1.23 - GO: GO:0005737 - HAMAP: MF_00361 - InterPro: IPR016064 - InterPro: IPR017438 - InterPro: IPR017437 - InterPro: IPR002504 - Gene3D: G3DSA:2.60.200.30 - Gene3D: G3DSA:3.40.50.10330 - PANTHER: PTHR20275
Pfam domain/function: PF01513 NAD_kinase; SSF111331 ATP-NAD_kinase_PpnK-typ
EC number: =2.7.1.23
Molecular weight: Translated: 28429; Mature: 28297
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPPRIAFLASPAEPAVAARARLTQRYGDHALDSADIVCALGGDGFMLQTLHRHGASDK CCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCC PVFGMKLGSVGFLMNQYRDNEDDLLERLQRAEPAYLRPLEMQVQTESGASAGSLAYNEVS CEEEEEECHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHH LLRQTRQAAHLSIDLNGQTRIAELIGDGVMVATPAGSTAYNYSAHGPILPLGSHTLALTP HHHHHHHHEEEEEEECCCHHHHHHHCCCEEEEECCCCCEECCCCCCCEEECCCCEEEEEC IAPYRPRRWRGAILKADTEVRFRVLDPYKRPVSVTADSHEIRDVVEVTIRESAQRQVTLL CCCCCCCCCCCEEEEECCEEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEE FDPEHNLEERIFSEQFAV ECCCCCHHHHHHHHHCCC >Mature Secondary Structure TAPPRIAFLASPAEPAVAARARLTQRYGDHALDSADIVCALGGDGFMLQTLHRHGASDK CCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCC PVFGMKLGSVGFLMNQYRDNEDDLLERLQRAEPAYLRPLEMQVQTESGASAGSLAYNEVS CEEEEEECHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHH LLRQTRQAAHLSIDLNGQTRIAELIGDGVMVATPAGSTAYNYSAHGPILPLGSHTLALTP HHHHHHHHEEEEEEECCCHHHHHHHCCCEEEEECCCCCEECCCCCCCEEECCCCEEEEEC IAPYRPRRWRGAILKADTEVRFRVLDPYKRPVSVTADSHEIRDVVEVTIRESAQRQVTLL CCCCCCCCCCCEEEEECCEEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEE FDPEHNLEERIFSEQFAV ECCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217