| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is yaiL [C]
Identifier: 21242304
GI number: 21242304
Start: 1793415
End: 1794149
Strand: Direct
Name: yaiL [C]
Synonym: XAC1553
Alternate gene names: 21242304
Gene position: 1793415-1794149 (Clockwise)
Preceding gene: 21242303
Following gene: 21242305
Centisome position: 34.65
GC content: 64.76
Gene sequence:
>735_bases ATGAGCGATACCTTACGTGACCAGTTGCTTGGGTTGGGCTTCAAGTCCGCGCCCAAGCCCGAACGCAAACCCGATGCACG TCCTGCAGCGCGTGCGCATGGCAATGGTGGCAAGCCAGCACCCGGGGGTAATCGGCCGGGCCAGGCCAGGGGGCCGCAGC GTCCGCATGCCGCTGCGGCGACCGATGGCCATGGCGAGCGCAAACCCGCTGGCAGGCCCGAGCGTCGTCATGACGGCAAG CCCGGTGCAGCGCCGCGTCCGCAGCATCCCGCTGCAGATCGCCGTGGCCCCAGGCCGGCGCGCACGCGCGAAGATATCGA TCTGGCCAAGGCCTATGCGATCCGTGCGCAGCGCGAGAAGGACGAGCGCATCGAAGCCGAGCGAGTGAAGCAGGAAGAAG CACGTCTGCGTCGCGAAGCCAAGGCCAAGCTCGAAGCGCTAGTGAAGGACAAGGGCCTGAATGATGCCGCTGCGGATATC GCCCGGCACTTTCCGTATGGCGGCAAGATCAAGCGCATTTACGTCAACGCCGATCAGCTCAAGGCGCTCAACACCGGGGA GCTGGGCGTGCTGCAACTCAACGGACGCTATCTGCTGGTGACTGCCGAGCTTCTCGCCGAAGCCGAAGCGGTGTTCGCCC CATCGGTGGCATTGAAAGTGGACCCAAACGCACCAGCGGGCGAGGACCCGTACGCTGATCCGAAATATCAGGTGCCCGAC GATCTGGTCTGGTAA
Upstream 100 bases:
>100_bases CCACCTGCTCGAGGATCTGGGCAAGGTGCGCTCCACATTGTTTGCCGATGCAGTGGACGAACCGCCGCCTCCGCACTACT GATTGCAGATTGCCACCGCC
Downstream 100 bases:
>100_bases GACGCGCGCTGCGTGGTGTGTGTTGTATACGGGCGCCTACGGGTGCCCTTTTTTTAGGCATTTTTCCGAAGGCAGCAAGC GCGCAGCCGCCGCGTAAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MSDTLRDQLLGLGFKSAPKPERKPDARPAARAHGNGGKPAPGGNRPGQARGPQRPHAAAATDGHGERKPAGRPERRHDGK PGAAPRPQHPAADRRGPRPARTREDIDLAKAYAIRAQREKDERIEAERVKQEEARLRREAKAKLEALVKDKGLNDAAADI ARHFPYGGKIKRIYVNADQLKALNTGELGVLQLNGRYLLVTAELLAEAEAVFAPSVALKVDPNAPAGEDPYADPKYQVPD DLVW
Sequences:
>Translated_244_residues MSDTLRDQLLGLGFKSAPKPERKPDARPAARAHGNGGKPAPGGNRPGQARGPQRPHAAAATDGHGERKPAGRPERRHDGK PGAAPRPQHPAADRRGPRPARTREDIDLAKAYAIRAQREKDERIEAERVKQEEARLRREAKAKLEALVKDKGLNDAAADI ARHFPYGGKIKRIYVNADQLKALNTGELGVLQLNGRYLLVTAELLAEAEAVFAPSVALKVDPNAPAGEDPYADPKYQVPD DLVW >Mature_243_residues SDTLRDQLLGLGFKSAPKPERKPDARPAARAHGNGGKPAPGGNRPGQARGPQRPHAAAATDGHGERKPAGRPERRHDGKP GAAPRPQHPAADRRGPRPARTREDIDLAKAYAIRAQREKDERIEAERVKQEEARLRREAKAKLEALVKDKGLNDAAADIA RHFPYGGKIKRIYVNADQLKALNTGELGVLQLNGRYLLVTAELLAEAEAVFAPSVALKVDPNAPAGEDPYADPKYQVPDD LVW
Specific function: Unknown
COG id: COG3122
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26522; Mature: 26391
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTLRDQLLGLGFKSAPKPERKPDARPAARAHGNGGKPAPGGNRPGQARGPQRPHAAAA CCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TDGHGERKPAGRPERRHDGKPGAAPRPQHPAADRRGPRPARTREDIDLAKAYAIRAQREK CCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH DERIEAERVKQEEARLRREAKAKLEALVKDKGLNDAAADIARHFPYGGKIKRIYVNADQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECHHHH KALNTGELGVLQLNGRYLLVTAELLAEAEAVFAPSVALKVDPNAPAGEDPYADPKYQVPD HCCCCCCEEEEEECCEEEEEEHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCC DLVW CCCC >Mature Secondary Structure SDTLRDQLLGLGFKSAPKPERKPDARPAARAHGNGGKPAPGGNRPGQARGPQRPHAAAA CHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TDGHGERKPAGRPERRHDGKPGAAPRPQHPAADRRGPRPARTREDIDLAKAYAIRAQREK CCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH DERIEAERVKQEEARLRREAKAKLEALVKDKGLNDAAADIARHFPYGGKIKRIYVNADQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECHHHH KALNTGELGVLQLNGRYLLVTAELLAEAEAVFAPSVALKVDPNAPAGEDPYADPKYQVPD HCCCCCCEEEEEECCEEEEEEHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCC DLVW CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA