| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242305
Identifier: 21242305
GI number: 21242305
Start: 1794420
End: 1795322
Strand: Direct
Name: 21242305
Synonym: XAC1554
Alternate gene names: NA
Gene position: 1794420-1795322 (Clockwise)
Preceding gene: 21242304
Following gene: 21242306
Centisome position: 34.67
GC content: 65.89
Gene sequence:
>903_bases ATGCAGGCTGGCGCCTCTGCCGTGGCCTCGTCCCTGCGTGGTTGCTCTGTCCTGCCAATGGTGCTGCATATGTCCCTGTG GTCGAAATCCTTGAAATCCAACGCCGTGGCGGCCGTCGTCTCTCGTGCGCCTGTTCGCGTGCCGGTGCGGGCGCGGCGCC GAACGCCGTCGGCTTTGGCGATGCTTGCGCTGTGCGTCGCTAGCGGGCACGCCGCCGCGCAGGCAGACGATGCGCCAGCG TTCGACCGGCCGGGCATTCCGTTCGCTGCGGAGGCGTTGCAGCCAGGTGCGTTTGCGTGGGAACAGGGCTTGCCGGATGC GAGTACCGATCGCAGCGGCGGGCAGCGCACGACCCAATACACTGCCGACACGCTGCTGCGTCTGGGGTTGTTCCAGGATG TGGAGCTGCAACTCGGGAGCGACAGCTACAACTGGCAGCATGGCGGTGGCGCGCGGGTGCGTGGCGGTGGCGACAGCAGT GTCGGGTTGAAGGTGGCCTTGCCATCGCGCTCGGAGAACTTTCATTGGGCTGCGTTGGGCACTTACAGCATCCCGACCGG CAGCCCGGCCTTCAGCGACGGCTACTCGCGCGAACTCGGGGTGACTGCATCCTGGGATCTGGCGCAGCAGCGCGCCCTCG CGTTATACGTCAATTACGCGCGCGACGACGACGGGCACACCTGGACGTTCTCTCCCAATTACACGTTTTTCTCCGGCGAC CATTTCAGCAGCTATGTGGAAGCGGGCTTGGACACCGGCAGCGAGCATGCGCGTGTGGCTGGCGCGGGTGGCGCATGGCA GCTGCCGCATGCGATGCAGCTGGATGTGTCGGTGTTGCGCGGACTGACCTCGGAAAGCCCGGACTGGGAGGGTGGCATCG GACTGTCGATCGCGTTTGAGTGA
Upstream 100 bases:
>100_bases CGGGGCTCACCCTGACCGCTAACCCGGCAGACAACAACCAGAGCGCCGCTATACAAGCCGGTCACAGGCGGCGCGGCACC ATGCGCGCCGTTACGTATCG
Downstream 100 bases:
>100_bases GCGGCGCGAACCGCCGCTGCTGGGTCACTGACCAGTCGGCGCGTTGCCCTGGGCCTCTCAGCCTGGTGCCAGATGAGCTA TGTTGCACTGCCGCATGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MQAGASAVASSLRGCSVLPMVLHMSLWSKSLKSNAVAAVVSRAPVRVPVRARRRTPSALAMLALCVASGHAAAQADDAPA FDRPGIPFAAEALQPGAFAWEQGLPDASTDRSGGQRTTQYTADTLLRLGLFQDVELQLGSDSYNWQHGGGARVRGGGDSS VGLKVALPSRSENFHWAALGTYSIPTGSPAFSDGYSRELGVTASWDLAQQRALALYVNYARDDDGHTWTFSPNYTFFSGD HFSSYVEAGLDTGSEHARVAGAGGAWQLPHAMQLDVSVLRGLTSESPDWEGGIGLSIAFE
Sequences:
>Translated_300_residues MQAGASAVASSLRGCSVLPMVLHMSLWSKSLKSNAVAAVVSRAPVRVPVRARRRTPSALAMLALCVASGHAAAQADDAPA FDRPGIPFAAEALQPGAFAWEQGLPDASTDRSGGQRTTQYTADTLLRLGLFQDVELQLGSDSYNWQHGGGARVRGGGDSS VGLKVALPSRSENFHWAALGTYSIPTGSPAFSDGYSRELGVTASWDLAQQRALALYVNYARDDDGHTWTFSPNYTFFSGD HFSSYVEAGLDTGSEHARVAGAGGAWQLPHAMQLDVSVLRGLTSESPDWEGGIGLSIAFE >Mature_300_residues MQAGASAVASSLRGCSVLPMVLHMSLWSKSLKSNAVAAVVSRAPVRVPVRARRRTPSALAMLALCVASGHAAAQADDAPA FDRPGIPFAAEALQPGAFAWEQGLPDASTDRSGGQRTTQYTADTLLRLGLFQDVELQLGSDSYNWQHGGGARVRGGGDSS VGLKVALPSRSENFHWAALGTYSIPTGSPAFSDGYSRELGVTASWDLAQQRALALYVNYARDDDGHTWTFSPNYTFFSGD HFSSYVEAGLDTGSEHARVAGAGGAWQLPHAMQLDVSVLRGLTSESPDWEGGIGLSIAFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31687; Mature: 31687
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: PS00099 THIOLASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAGASAVASSLRGCSVLPMVLHMSLWSKSLKSNAVAAVVSRAPVRVPVRARRRTPSALA CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHCCCHHHHH MLALCVASGHAAAQADDAPAFDRPGIPFAAEALQPGAFAWEQGLPDASTDRSGGQRTTQY HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHCCCCCCCCCCCCCCCHHHH TADTLLRLGLFQDVELQLGSDSYNWQHGGGARVRGGGDSSVGLKVALPSRSENFHWAALG HHHHHHHHCCCCCEEEEECCCCCCEECCCCCEEECCCCCCCEEEEEECCCCCCEEEEEEE TYSIPTGSPAFSDGYSRELGVTASWDLAQQRALALYVNYARDDDGHTWTFSPNYTFFSGD EEECCCCCCCCCCCCCCCCCCEECHHHHHHCEEEEEEEEEECCCCCEEEECCCEEEECCC HFSSYVEAGLDTGSEHARVAGAGGAWQLPHAMQLDVSVLRGLTSESPDWEGGIGLSIAFE HHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure MQAGASAVASSLRGCSVLPMVLHMSLWSKSLKSNAVAAVVSRAPVRVPVRARRRTPSALA CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHCCCHHHHH MLALCVASGHAAAQADDAPAFDRPGIPFAAEALQPGAFAWEQGLPDASTDRSGGQRTTQY HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHCCCCCCCCCCCCCCCHHHH TADTLLRLGLFQDVELQLGSDSYNWQHGGGARVRGGGDSSVGLKVALPSRSENFHWAALG HHHHHHHHCCCCCEEEEECCCCCCEECCCCCEEECCCCCCCEEEEEECCCCCCEEEEEEE TYSIPTGSPAFSDGYSRELGVTASWDLAQQRALALYVNYARDDDGHTWTFSPNYTFFSGD EEECCCCCCCCCCCCCCCCCCEECHHHHHHCEEEEEEEEEECCCCCEEEECCCEEEECCC HFSSYVEAGLDTGSEHARVAGAGGAWQLPHAMQLDVSVLRGLTSESPDWEGGIGLSIAFE HHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA