| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is cynT [H]
Identifier: 21242214
GI number: 21242214
Start: 1689325
End: 1690116
Strand: Direct
Name: cynT [H]
Synonym: XAC1462
Alternate gene names: 21242214
Gene position: 1689325-1690116 (Clockwise)
Preceding gene: 21242213
Following gene: 21242217
Centisome position: 32.64
GC content: 64.77
Gene sequence:
>792_bases ATGCCCATCCGGCCCGTTGGGTCGCGTCCGCCACATAGTACGATCGCGACACCAACCACACAGCAGGGGGGCTCGTCCAT GTCGCATTCCGCATCGCGTCGAAAATTGCTGCAGTGCGCCTGTTGCGCGCCGATCGCGGCCGCTGCGGCGTCCCTGCCGT TCGCCTTACGCGCGGCGCCGTCCAAGAAAACCGATTTGAATGCCGAGCAGGCGCTGGAGATTCTGCGTGACGGCAACAAT GCATTCGTCCAAAACCGGCCCAGGAAAGTGATCTCCGACAGCAAGCGCCGTCTGGAGCTCGCGCTGGGCCAGACCCCGTT CGTCGTCCTGGTGTCGTGCTCGGATTCGCGCGTGCCGCCGGAGCTGCTGTTCGGCCGCGGCCTGGGCGAAATGTTCATCG TCCGCAACGCCGGCAATACCGTCGATACCACCGCGCTCGGTTCGATCGAATATGCAGTCAGCCAGCTCGGCGTGCCGCTG GTGGTGGTGATGGGCCACGAAAGCTGCGGTGCGGTGGCGGCGGCAGTGTCGGTCGTGGAGAACAACACGTTCTTCCCGGG CGCCATCGGCTCGATGATCGAGCCGATCGTTCCGGCGGTGCTGACCGCCAAGGCCAAGGGCGGTACCGACCTGCTGGCCG ATTCGGTCAAGGCCAACGTCAAGCGTACCGTCGACCGCTTGCGCGCGGCGTCCGAACCTGCGTTGCTGGAACCATTGCGC GCCGGCAATGTGCGCGTGGTCGGTGCGTACTACACCTTGCAGGACGGCAAGGTGGACTTTTTCGACGTTTGA
Upstream 100 bases:
>100_bases CAGATGAAGGCGCGCCCAGCATTCCAGGAAACCTATCGCCGGGAAGGCCTGACGGACTGGACCTGAACCTGCGTCCGCGC AATGCGTCGGCTGATCGCAG
Downstream 100 bases:
>100_bases GTCGGGCGCAGGCAAGCCTCGGCCATCGCAATATGCTTTGGTCCGCCGGTAACGTGTCCTGCAGCATGGTTGCGTAAGAC GAAAAGGCCGACATGCGCAC
Product: carbonic anhydrase
Products: NA
Alternate protein names: Carbonate dehydratase [H]
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MPIRPVGSRPPHSTIATPTTQQGGSSMSHSASRRKLLQCACCAPIAAAAASLPFALRAAPSKKTDLNAEQALEILRDGNN AFVQNRPRKVISDSKRRLELALGQTPFVVLVSCSDSRVPPELLFGRGLGEMFIVRNAGNTVDTTALGSIEYAVSQLGVPL VVVMGHESCGAVAAAVSVVENNTFFPGAIGSMIEPIVPAVLTAKAKGGTDLLADSVKANVKRTVDRLRAASEPALLEPLR AGNVRVVGAYYTLQDGKVDFFDV
Sequences:
>Translated_263_residues MPIRPVGSRPPHSTIATPTTQQGGSSMSHSASRRKLLQCACCAPIAAAAASLPFALRAAPSKKTDLNAEQALEILRDGNN AFVQNRPRKVISDSKRRLELALGQTPFVVLVSCSDSRVPPELLFGRGLGEMFIVRNAGNTVDTTALGSIEYAVSQLGVPL VVVMGHESCGAVAAAVSVVENNTFFPGAIGSMIEPIVPAVLTAKAKGGTDLLADSVKANVKRTVDRLRAASEPALLEPLR AGNVRVVGAYYTLQDGKVDFFDV >Mature_262_residues PIRPVGSRPPHSTIATPTTQQGGSSMSHSASRRKLLQCACCAPIAAAAASLPFALRAAPSKKTDLNAEQALEILRDGNNA FVQNRPRKVISDSKRRLELALGQTPFVVLVSCSDSRVPPELLFGRGLGEMFIVRNAGNTVDTTALGSIEYAVSQLGVPLV VVMGHESCGAVAAAVSVVENNTFFPGAIGSMIEPIVPAVLTAKAKGGTDLLADSVKANVKRTVDRLRAASEPALLEPLRA GNVRVVGAYYTLQDGKVDFFDV
Specific function: Catalyzes the reversible hydration of carbon dioxide to form bicarbonate [H]
COG id: COG0288
COG function: function code P; Carbonic anhydrase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the beta-class carbonic anhydrase family [H]
Homologues:
Organism=Escherichia coli, GI1786534, Length=173, Percent_Identity=31.7919075144509, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1786318, Length=82, Percent_Identity=43.9024390243902, Blast_Score=69, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001765 - InterPro: IPR015892 [H]
Pfam domain/function: PF00484 Pro_CA [H]
EC number: =4.2.1.1 [H]
Molecular weight: Translated: 27647; Mature: 27516
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: PS00704 PROK_CO2_ANHYDRASE_1 ; PS00705 PROK_CO2_ANHYDRASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIRPVGSRPPHSTIATPTTQQGGSSMSHSASRRKLLQCACCAPIAAAAASLPFALRAAP CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCC SKKTDLNAEQALEILRDGNNAFVQNRPRKVISDSKRRLELALGQTPFVVLVSCSDSRVPP CCCCCCCHHHHHHHHHCCCCCEECCCCHHHHHCHHHHEEEEECCCCEEEEEECCCCCCCH ELLFGRGLGEMFIVRNAGNTVDTTALGSIEYAVSQLGVPLVVVMGHESCGAVAAAVSVVE HHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHC NNTFFPGAIGSMIEPIVPAVLTAKAKGGTDLLADSVKANVKRTVDRLRAASEPALLEPLR CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHC AGNVRVVGAYYTLQDGKVDFFDV CCCEEEEEEEEEEECCCEEEEEC >Mature Secondary Structure PIRPVGSRPPHSTIATPTTQQGGSSMSHSASRRKLLQCACCAPIAAAAASLPFALRAAP CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCC SKKTDLNAEQALEILRDGNNAFVQNRPRKVISDSKRRLELALGQTPFVVLVSCSDSRVPP CCCCCCCHHHHHHHHHCCCCCEECCCCHHHHHCHHHHEEEEECCCCEEEEEECCCCCCCH ELLFGRGLGEMFIVRNAGNTVDTTALGSIEYAVSQLGVPLVVVMGHESCGAVAAAVSVVE HHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHC NNTFFPGAIGSMIEPIVPAVLTAKAKGGTDLLADSVKANVKRTVDRLRAASEPALLEPLR CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHC AGNVRVVGAYYTLQDGKVDFFDV CCCEEEEEEEEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]