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The map label for this gene is 21242086

Identifier: 21242086

GI number: 21242086

Start: 1538407

End: 1539984

Strand: Direct

Name: 21242086

Synonym: XAC1333

Alternate gene names: NA

Gene position: 1538407-1539984 (Clockwise)

Preceding gene: 21242085

Following gene: 21242087

Centisome position: 29.72

GC content: 64.7

Gene sequence:

>1578_bases
ATGCATGATTCCAGCGCACTTATCGCGCAAACCAACCCACAAACGCCGGCCCATACGCTGCGTTTGATTCTGGGCGACCA
GCTCAATGCGCAACACAGCTGGTTCGCGACGCGCGATGCGGGCGTGGTCTATGTGTTGATGGAAGTGCGGCAGGGAACCG
ACTACGTGCTGCATCACGCGCAGAAGGTCCTGGCGATCTTCGCGGCCATGCGCGCGTTCGCTGCGGGATTGCGGCGTGCC
GGGCATCGGGTGCGCTATGTGACGATCGACAACGCCAGCAACCGGCAGTCGATCCCGCACAACCTCGAGGCGCTGATGGC
GCATTACCGTGCCGGAGATCTGGAATACCAGGCCCCGGACGAATGGCGGCTGGACGAAGCACTACAGCATTGGAGCGCCG
CGCAACCCTTTGCCACGCGCATGGTCGACAGCGAACATTTTCTGACCGCGCGCAATGAGGTCGCCGCCTGTTTTCCTACC
GGCAGCCCATGGCGCATGGAAGTGTTTTATCGGCGTATGCGGCGCCAGCATCGGATCCTGCTCGATGCCGCCGGCGAACC
GGAAGGCGGGCGCTGGAACTTCGATCACGACAATCGTGCGCCGTGGCCGGGCGACCCGCCTGCGCCACAGGATTGGCGCA
CGACTCACGATCACAGCGCGGTATGGCACACGATCGAAGCCGCCGGCGTGCGCAGTTTTGGCGCACCGAACGCGCAAGCC
CTGCCATGGCCGCTGGATCGCGATGAGGCCTTGCAGCATCTGGAGGCTTTCATCGCGCATGCATTGCCCGATTTCGGCCG
CTACGAGGATGCGATGAGCACGCGTAGCCCGCGCCTGTTCCATTCGCTGCTCTCGTTCGCGCTCAACGTCAAGATGCTGC
ATCCGCGCGAAGCGATCGCGCGCGCCGAGGCGGCATGGCGGCAAGGGCATGCGCCGTTGGCGGCGGTGGAAGGCTTCATC
CGGCAGATTCTGGGCTGGCGCGAATATGTGCGCGGTGTGTATTGGTCGCAGATGCCCGGCTACGCGGAATCGAATCATCT
CGACCAGCATGCACCGCTGCCGCACTGGTTCTGGGACGGGCAGATCGGCATGCGCTGCCTGGCCGATGCGGTCGGCAATT
CCTTGGCCAACGCGCATGCGCATCACATCCAACGGCTGATGGTGATCGGCAATTTTGCGCTGCTGGCGGGGCTGGACCCG
CAGGCCCTGCACCGCTGGTACCTTGGCGTGTACATCGATGCCTTCGAGTGGGTGGAGCTGCCCAATACGGTGGGCATGAG
CCAGTTCGCCGATGGCGGCCTGCTGGGCAGCAAGCCGTATATCAGCGGCGCGGCGTACATCGATCGCATGAGCGACTATT
GCGATGGCTGTCGCTACCAGCGCAAGCAGCGGGTCGGGCCGAACGCGTGCCCGTACAACGCGCTGTACTGGGATTTCCTG
CAGCGCCAGCGCCCGCTGTTGGGCGCCAACGAACGCCTGGCACTGCCCTACCGTCAGCTCGACGGTATGGCCCCCGAGAT
GCTGGCACAGGTGCGGGCCCAGGCCGCGTACTGGCGGGCCCACCTCGAGGTGCTGTGA

Upstream 100 bases:

>100_bases
GCGTTCCCGGTGACTCGAATTTTTTTCGGGTCGAAGGCGTGCCCATGCGCCGCATCGGCCCGGACGCGCCCCGCATCCGG
CATGATCGGGCGTCACTCTG

Downstream 100 bases:

>100_bases
GCCTGCTCGCAGCGCCCGCAGGGGCGCGCAGCTGAATGCGCGATCTGACGCTGCCACGCGCATCTGCGACAATGCCGCGC
TGCGCCACCATGGCGCCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: Deoxyribodipyrimidine Photolyase-Like Protein; Photolyase; Deoxyribodipyrimidine Photolyase Family Protein; Deoxyribodipyrimidine Photolyase; Photolyase Protein Family Protein; Deoxyribodipyrimidine Photolyase-Like Protein Protein; Photolyase Family Protein; Cryptochrome/Photolyase; DNA Photolyase; Bcct Transporter; Protein Related Deoxyribodipyrimidine Photolyase; Deoxyribodipyrimidine Photo-Lyase; Cryptochrome/Photolyase-Related; Photolyase Related Protein; BCCT Transporter; Alpha-Deoxyribodipyrimidine Photolyase-Related Protein; Deoxyribodipyrimidine Photolyase Related Protein; A Deoxyribodipyrimidine Photolyase-Like Protein; Deoxyribodipyrimidine Photolyase Homolog

Number of amino acids: Translated: 525; Mature: 525

Protein sequence:

>525_residues
MHDSSALIAQTNPQTPAHTLRLILGDQLNAQHSWFATRDAGVVYVLMEVRQGTDYVLHHAQKVLAIFAAMRAFAAGLRRA
GHRVRYVTIDNASNRQSIPHNLEALMAHYRAGDLEYQAPDEWRLDEALQHWSAAQPFATRMVDSEHFLTARNEVAACFPT
GSPWRMEVFYRRMRRQHRILLDAAGEPEGGRWNFDHDNRAPWPGDPPAPQDWRTTHDHSAVWHTIEAAGVRSFGAPNAQA
LPWPLDRDEALQHLEAFIAHALPDFGRYEDAMSTRSPRLFHSLLSFALNVKMLHPREAIARAEAAWRQGHAPLAAVEGFI
RQILGWREYVRGVYWSQMPGYAESNHLDQHAPLPHWFWDGQIGMRCLADAVGNSLANAHAHHIQRLMVIGNFALLAGLDP
QALHRWYLGVYIDAFEWVELPNTVGMSQFADGGLLGSKPYISGAAYIDRMSDYCDGCRYQRKQRVGPNACPYNALYWDFL
QRQRPLLGANERLALPYRQLDGMAPEMLAQVRAQAAYWRAHLEVL

Sequences:

>Translated_525_residues
MHDSSALIAQTNPQTPAHTLRLILGDQLNAQHSWFATRDAGVVYVLMEVRQGTDYVLHHAQKVLAIFAAMRAFAAGLRRA
GHRVRYVTIDNASNRQSIPHNLEALMAHYRAGDLEYQAPDEWRLDEALQHWSAAQPFATRMVDSEHFLTARNEVAACFPT
GSPWRMEVFYRRMRRQHRILLDAAGEPEGGRWNFDHDNRAPWPGDPPAPQDWRTTHDHSAVWHTIEAAGVRSFGAPNAQA
LPWPLDRDEALQHLEAFIAHALPDFGRYEDAMSTRSPRLFHSLLSFALNVKMLHPREAIARAEAAWRQGHAPLAAVEGFI
RQILGWREYVRGVYWSQMPGYAESNHLDQHAPLPHWFWDGQIGMRCLADAVGNSLANAHAHHIQRLMVIGNFALLAGLDP
QALHRWYLGVYIDAFEWVELPNTVGMSQFADGGLLGSKPYISGAAYIDRMSDYCDGCRYQRKQRVGPNACPYNALYWDFL
QRQRPLLGANERLALPYRQLDGMAPEMLAQVRAQAAYWRAHLEVL
>Mature_525_residues
MHDSSALIAQTNPQTPAHTLRLILGDQLNAQHSWFATRDAGVVYVLMEVRQGTDYVLHHAQKVLAIFAAMRAFAAGLRRA
GHRVRYVTIDNASNRQSIPHNLEALMAHYRAGDLEYQAPDEWRLDEALQHWSAAQPFATRMVDSEHFLTARNEVAACFPT
GSPWRMEVFYRRMRRQHRILLDAAGEPEGGRWNFDHDNRAPWPGDPPAPQDWRTTHDHSAVWHTIEAAGVRSFGAPNAQA
LPWPLDRDEALQHLEAFIAHALPDFGRYEDAMSTRSPRLFHSLLSFALNVKMLHPREAIARAEAAWRQGHAPLAAVEGFI
RQILGWREYVRGVYWSQMPGYAESNHLDQHAPLPHWFWDGQIGMRCLADAVGNSLANAHAHHIQRLMVIGNFALLAGLDP
QALHRWYLGVYIDAFEWVELPNTVGMSQFADGGLLGSKPYISGAAYIDRMSDYCDGCRYQRKQRVGPNACPYNALYWDFL
QRQRPLLGANERLALPYRQLDGMAPEMLAQVRAQAAYWRAHLEVL

Specific function: Unknown

COG id: COG3046

COG function: function code R; Uncharacterized protein related to deoxyribodipyrimidine photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59644; Mature: 59644

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDSSALIAQTNPQTPAHTLRLILGDQLNAQHSWFATRDAGVVYVLMEVRQGTDYVLHHA
CCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEEHHCCHHHHHHHH
QKVLAIFAAMRAFAAGLRRAGHRVRYVTIDNASNRQSIPHNLEALMAHYRAGDLEYQAPD
HHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
EWRLDEALQHWSAAQPFATRMVDSEHFLTARNEVAACFPTGSPWRMEVFYRRMRRQHRIL
CCCHHHHHHHHCCCCCHHHHHCCCHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHEEE
LDAAGEPEGGRWNFDHDNRAPWPGDPPAPQDWRTTHDHSAVWHTIEAAGVRSFGAPNAQA
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
LPWPLDRDEALQHLEAFIAHALPDFGRYEDAMSTRSPRLFHSLLSFALNVKMLHPREAIA
CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHEECHHHHHH
RAEAAWRQGHAPLAAVEGFIRQILGWREYVRGVYWSQMPGYAESNHLDQHAPLPHWFWDG
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECC
QIGMRCLADAVGNSLANAHAHHIQRLMVIGNFALLAGLDPQALHRWYLGVYIDAFEWVEL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
PNTVGMSQFADGGLLGSKPYISGAAYIDRMSDYCDGCRYQRKQRVGPNACPYNALYWDFL
CCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
QRQRPLLGANERLALPYRQLDGMAPEMLAQVRAQAAYWRAHLEVL
HHCCCCCCCCCCEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHDSSALIAQTNPQTPAHTLRLILGDQLNAQHSWFATRDAGVVYVLMEVRQGTDYVLHHA
CCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEEHHCCHHHHHHHH
QKVLAIFAAMRAFAAGLRRAGHRVRYVTIDNASNRQSIPHNLEALMAHYRAGDLEYQAPD
HHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
EWRLDEALQHWSAAQPFATRMVDSEHFLTARNEVAACFPTGSPWRMEVFYRRMRRQHRIL
CCCHHHHHHHHCCCCCHHHHHCCCHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHEEE
LDAAGEPEGGRWNFDHDNRAPWPGDPPAPQDWRTTHDHSAVWHTIEAAGVRSFGAPNAQA
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
LPWPLDRDEALQHLEAFIAHALPDFGRYEDAMSTRSPRLFHSLLSFALNVKMLHPREAIA
CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHEECHHHHHH
RAEAAWRQGHAPLAAVEGFIRQILGWREYVRGVYWSQMPGYAESNHLDQHAPLPHWFWDG
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECC
QIGMRCLADAVGNSLANAHAHHIQRLMVIGNFALLAGLDPQALHRWYLGVYIDAFEWVEL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
PNTVGMSQFADGGLLGSKPYISGAAYIDRMSDYCDGCRYQRKQRVGPNACPYNALYWDFL
CCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
QRQRPLLGANERLALPYRQLDGMAPEMLAQVRAQAAYWRAHLEVL
HHCCCCCCCCCCEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA