| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242085
Identifier: 21242085
GI number: 21242085
Start: 1537220
End: 1538230
Strand: Direct
Name: 21242085
Synonym: XAC1332
Alternate gene names: NA
Gene position: 1537220-1538230 (Clockwise)
Preceding gene: 21242084
Following gene: 21242086
Centisome position: 29.7
GC content: 68.35
Gene sequence:
>1011_bases ATGACACCGCCCGACCGCGTGCAGACGATCGCCGTGATCGGCGCCGGGCTGGCCGGGCTGGTCTGCGCGCAGCAGCTGCA GGCGGGCGGCCATGCGGTGACGGTGTTCGATCAGGCCCAGACCCCGGGTGGCCGCATGCGCCACTACAGCGCCGAGCAGT GGCAATGCGATCACGGAGCGCAGTATTTCACCGCGCGCGATCCTGCATTTGCAGCGGTCGTGGATGCCTGGATCGATGCC GGGATCGCCGCGCCCTGGCAGGCACGTATCGCAAGCTGGGACGGCACGCGGTTGCGCCGATCACAGAGCGCGCTGACGCG TTATGTAGGTGTTCCCGAGATGCCCGCGCCGGCGCGTACGCTTGCCGCGCAGTTGGATGTGCGTCTGTGTGCCGAGGTGC ACGCGCTGCGGCGCGGCCGGCAGGGATGGCGCGTATCGGTGTCGCAAGACGCTGCAGAGCCTCTGTTCGACACGGTGCTG CTGGCCGTCCCGGCACCGAATGCGGCTGCGTTAGTCGCGCAGGCCGCGCCTGCGTTGCGGACGATTGCCGAGCAGGTGCG CATGCAGCCTGCATGGGCGGTGATGGCGCGCTTCGATGCGCCAATCGATCCAGGTTACGACGCGCTGTTCGTCAATGCCG GCGCGTTACGCTGGGTGGCGCGCAACTCCAGCAAGCCCGCGCGTGCGGGTGCGGAGACCTGGCTGCTGCATGCAACGGCC GAGTGGAGCCAGGCGCATTGCGATGCCATGCCTGGGCACGTCATCGCCAGCCTCGTGCCGGAGCTTGCGGCGCTCGGTTT GCCGATACCGCGGTCCTGCGATGCTTTTTTCTGGAAAGTCGCCAGCAGCGCCCCCGCGTTGCAGATCGGTTGCGTCTGGG ACGCGCAGCTTGGCATGGGCATGTGTGGCGACTGGTTGGCAGGCGGCAAGGTGGAGGGGGCATGGCAGAGTGGAATGGCG TTGGCCCAGCTTGTGTCTGCCGGCGACGCGCCGCACAGCGCTTGCGACTGA
Upstream 100 bases:
>100_bases GCGGCCGAATCGACGCCAGTCGGCGGCCCTGATGCCTGCGGGCCCGACGGCTGCGCGGTGTGACGCATGCCTGCCGCATG CACCGTCACCTGGGCGATGC
Downstream 100 bases:
>100_bases CGCTGTGCCAAGCAGCGCAGAACAGAGGGTGATGCGGTGCAAGTCCATACCGCGGTCATGGCAGTCGTTCGTGCATGCGT TCCCGGTGACTCGAATTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Amine Oxidase Flavin-Containing; Amine Oxidase; Deoxyribodipyrimidine Photolyase; NAD/Fad-Dependent Oxidoreductase Protein; NAD/FAD-Dependent Oxidoreductase; FAD Dependent Oxidoreductase Domain Protein; Fad Dependent Oxidoreductase
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MTPPDRVQTIAVIGAGLAGLVCAQQLQAGGHAVTVFDQAQTPGGRMRHYSAEQWQCDHGAQYFTARDPAFAAVVDAWIDA GIAAPWQARIASWDGTRLRRSQSALTRYVGVPEMPAPARTLAAQLDVRLCAEVHALRRGRQGWRVSVSQDAAEPLFDTVL LAVPAPNAAALVAQAAPALRTIAEQVRMQPAWAVMARFDAPIDPGYDALFVNAGALRWVARNSSKPARAGAETWLLHATA EWSQAHCDAMPGHVIASLVPELAALGLPIPRSCDAFFWKVASSAPALQIGCVWDAQLGMGMCGDWLAGGKVEGAWQSGMA LAQLVSAGDAPHSACD
Sequences:
>Translated_336_residues MTPPDRVQTIAVIGAGLAGLVCAQQLQAGGHAVTVFDQAQTPGGRMRHYSAEQWQCDHGAQYFTARDPAFAAVVDAWIDA GIAAPWQARIASWDGTRLRRSQSALTRYVGVPEMPAPARTLAAQLDVRLCAEVHALRRGRQGWRVSVSQDAAEPLFDTVL LAVPAPNAAALVAQAAPALRTIAEQVRMQPAWAVMARFDAPIDPGYDALFVNAGALRWVARNSSKPARAGAETWLLHATA EWSQAHCDAMPGHVIASLVPELAALGLPIPRSCDAFFWKVASSAPALQIGCVWDAQLGMGMCGDWLAGGKVEGAWQSGMA LAQLVSAGDAPHSACD >Mature_335_residues TPPDRVQTIAVIGAGLAGLVCAQQLQAGGHAVTVFDQAQTPGGRMRHYSAEQWQCDHGAQYFTARDPAFAAVVDAWIDAG IAAPWQARIASWDGTRLRRSQSALTRYVGVPEMPAPARTLAAQLDVRLCAEVHALRRGRQGWRVSVSQDAAEPLFDTVLL AVPAPNAAALVAQAAPALRTIAEQVRMQPAWAVMARFDAPIDPGYDALFVNAGALRWVARNSSKPARAGAETWLLHATAE WSQAHCDAMPGHVIASLVPELAALGLPIPRSCDAFFWKVASSAPALQIGCVWDAQLGMGMCGDWLAGGKVEGAWQSGMAL AQLVSAGDAPHSACD
Specific function: Unknown
COG id: COG3380
COG function: function code R; Predicted NAD/FAD-dependent oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35584; Mature: 35453
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPPDRVQTIAVIGAGLAGLVCAQQLQAGGHAVTVFDQAQTPGGRMRHYSAEQWQCDHGA CCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHCCCCCCCCCCCCCC QYFTARDPAFAAVVDAWIDAGIAAPWQARIASWDGTRLRRSQSALTRYVGVPEMPAPART CEEECCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHH LAAQLDVRLCAEVHALRRGRQGWRVSVSQDAAEPLFDTVLLAVPAPNAAALVAQAAPALR HHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHH TIAEQVRMQPAWAVMARFDAPIDPGYDALFVNAGALRWVARNSSKPARAGAETWLLHATA HHHHHHHCCHHHHHHHHCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCEEEEEEEC EWSQAHCDAMPGHVIASLVPELAALGLPIPRSCDAFFWKVASSAPALQIGCVWDAQLGMG CHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCC MCGDWLAGGKVEGAWQSGMALAQLVSAGDAPHSACD CCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TPPDRVQTIAVIGAGLAGLVCAQQLQAGGHAVTVFDQAQTPGGRMRHYSAEQWQCDHGA CCCHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHCCCCCCCCCCCCCC QYFTARDPAFAAVVDAWIDAGIAAPWQARIASWDGTRLRRSQSALTRYVGVPEMPAPART CEEECCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHH LAAQLDVRLCAEVHALRRGRQGWRVSVSQDAAEPLFDTVLLAVPAPNAAALVAQAAPALR HHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHH TIAEQVRMQPAWAVMARFDAPIDPGYDALFVNAGALRWVARNSSKPARAGAETWLLHATA HHHHHHHCCHHHHHHHHCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCEEEEEEEC EWSQAHCDAMPGHVIASLVPELAALGLPIPRSCDAFFWKVASSAPALQIGCVWDAQLGMG CHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCC MCGDWLAGGKVEGAWQSGMALAQLVSAGDAPHSACD CCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA