| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is frnE
Identifier: 21242084
GI number: 21242084
Start: 1536457
End: 1537182
Strand: Direct
Name: frnE
Synonym: XAC1331
Alternate gene names: NA
Gene position: 1536457-1537182 (Clockwise)
Preceding gene: 21242083
Following gene: 21242085
Centisome position: 29.69
GC content: 67.91
Gene sequence:
>726_bases ATGCTCTGCCAATCCCGAATCACCACGAACGAACCCCAGCTCATGCGCATCGACATCTGGTCCGACGTAGTGTGCCCCTG GTGCTGGATCGGCAAACGCCGTTTCCAGGCCGCCCTCGCGGCGCTTGGTGCGCAGGCGCCGGCCCTGGATATTCACTACC ACGCGTTCCAGCTTGATCCGGATGCCGGCCTGGAGCCGACGCCATTGCGCGAGGCGCTGGCGCTGAAGTTCGGCGGTACG GCACGGGTCGAGCAGATCCTGGCGCAGACCCAGGCCACTGCGCAGGCGGAGGGCTTGCCGCTGGATTTTGGCCGTGGGCA GGTGCAGGTCAGCACGCTGCGTGCGCATCGTTTGATCTGGCTGGCCAGCCACGAGGGCGATGTGGATGCGGTCATGGAAG CGCTGTTCCATGCGCATTTTGCCGAAGGCCGTAACGTCGGCGCGACCGACACGCTGGTGCGTGCCGGTGCGGCCGGCGGC CTTGCGGCGGCCCGTGTGCAGGCGATGCTGGAATCGGACGAAGGCAGCGTCGAGGTACAAGCGCAGCTGGCGCAGGCGGC CGCGTTGGGCATCCGCGCAGTGCCCAGTTTTGTGATCGACGGTCGTGCGCTGATCCAGGGCGCGCAGCCGCCGGAAAGTT TTGCGCAGGCGCTGCTGCAGTTGGCGGCCGAATCGACGCCAGTCGGCGGCCCTGATGCCTGCGGGCCCGACGGCTGCGCG GTGTGA
Upstream 100 bases:
>100_bases AAGAACAGATGATGCGCGGCACCAGGGCGCTTTGCAGCGCGACATCATGGCTCCCCAATTTCAGCAGTGGCAAACGCTTT GCGATTGCAGAATCCCGTCT
Downstream 100 bases:
>100_bases CGCATGCCTGCCGCATGCACCGTCACCTGGGCGATGCATGACACCGCCCGACCGCGTGCAGACGATCGCCGTGATCGGCG CCGGGCTGGCCGGGCTGGTC
Product: polyketide synthase
Products: NA
Alternate protein names: Dsba Oxidoreductase; Dithiol-Disulfide Isomerase; FrnE Protein; Protein Dithiol-Disulfide Isomerase; Protein-Disulfide Isomerase; Polyketide Synthase; Thioredoxin Domain Protein DsbA Family; DSBA-Like Thioredoxin Domain-Containing Protein; Thiol Oxidoreductase FrnE; Oxidoreductase; Polyketide Biosynthesis Associated Protein; DSBA-Like Thioredoxin Family Protein; DsbA Oxidoreductase; 2-Hydroxychromene-2-Carboxylateisomerase Family Protein; Isomerase; DSBA-Like Thioredoxin Domain; Dsb Family Thioredoxin Protein; Protein Disulfide-Isomerase; Protein Disulfide Isomerase; Dsba Oxidoreductase Family Protein; Dithiol-Disulfide Isomerase Protein; Thioredoxin Domain-Containing Protein; 2-Hydroxychromene-2-Carboxylate Isomerase Family Protein; Polyketide Biosynthesis Dithiol-Disulfide Isomerase; Disulfide Isomerase; Protein-Disulfide Isomerase DsbC/DsbG; Thiol Oxidoreductase; DsbA Family Oxidoreductase
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MLCQSRITTNEPQLMRIDIWSDVVCPWCWIGKRRFQAALAALGAQAPALDIHYHAFQLDPDAGLEPTPLREALALKFGGT ARVEQILAQTQATAQAEGLPLDFGRGQVQVSTLRAHRLIWLASHEGDVDAVMEALFHAHFAEGRNVGATDTLVRAGAAGG LAAARVQAMLESDEGSVEVQAQLAQAAALGIRAVPSFVIDGRALIQGAQPPESFAQALLQLAAESTPVGGPDACGPDGCA V
Sequences:
>Translated_241_residues MLCQSRITTNEPQLMRIDIWSDVVCPWCWIGKRRFQAALAALGAQAPALDIHYHAFQLDPDAGLEPTPLREALALKFGGT ARVEQILAQTQATAQAEGLPLDFGRGQVQVSTLRAHRLIWLASHEGDVDAVMEALFHAHFAEGRNVGATDTLVRAGAAGG LAAARVQAMLESDEGSVEVQAQLAQAAALGIRAVPSFVIDGRALIQGAQPPESFAQALLQLAAESTPVGGPDACGPDGCA V >Mature_241_residues MLCQSRITTNEPQLMRIDIWSDVVCPWCWIGKRRFQAALAALGAQAPALDIHYHAFQLDPDAGLEPTPLREALALKFGGT ARVEQILAQTQATAQAEGLPLDFGRGQVQVSTLRAHRLIWLASHEGDVDAVMEALFHAHFAEGRNVGATDTLVRAGAAGG LAAARVQAMLESDEGSVEVQAQLAQAAALGIRAVPSFVIDGRALIQGAQPPESFAQALLQLAAESTPVGGPDACGPDGCA V
Specific function: Unknown
COG id: COG2761
COG function: function code Q; Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25347; Mature: 25347
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLCQSRITTNEPQLMRIDIWSDVVCPWCWIGKRRFQAALAALGAQAPALDIHYHAFQLDP CCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECC DAGLEPTPLREALALKFGGTARVEQILAQTQATAQAEGLPLDFGRGQVQVSTLRAHRLIW CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEEEEEEEEEE LASHEGDVDAVMEALFHAHFAEGRNVGATDTLVRAGAAGGLAAARVQAMLESDEGSVEVQ EECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEHH AQLAQAAALGIRAVPSFVIDGRALIQGAQPPESFAQALLQLAAESTPVGGPDACGPDGCA HHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC V C >Mature Secondary Structure MLCQSRITTNEPQLMRIDIWSDVVCPWCWIGKRRFQAALAALGAQAPALDIHYHAFQLDP CCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECC DAGLEPTPLREALALKFGGTARVEQILAQTQATAQAEGLPLDFGRGQVQVSTLRAHRLIW CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEEEEEEEEEE LASHEGDVDAVMEALFHAHFAEGRNVGATDTLVRAGAAGGLAAARVQAMLESDEGSVEVQ EECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEHH AQLAQAAALGIRAVPSFVIDGRALIQGAQPPESFAQALLQLAAESTPVGGPDACGPDGCA HHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC V C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA