| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is czcD [H]
Identifier: 21242070
GI number: 21242070
Start: 1520549
End: 1521514
Strand: Direct
Name: czcD [H]
Synonym: XAC1317
Alternate gene names: 21242070
Gene position: 1520549-1521514 (Clockwise)
Preceding gene: 21242069
Following gene: 21242072
Centisome position: 29.38
GC content: 65.42
Gene sequence:
>966_bases ATGGGACACGACCACAACCACGCACCCAGCGAAATCCGTCACGAAGCGCCCTTGTGGTGGGCACTGGGGCTGACCGCCAC CTTCCTGCTGGCAGAGATCGTCGGCGCATTCGTGACCAACAGCCTGGCGCTGCTGTCCGACGCTGCGCATATGGCCACCG ACACCGTCGGACTGATGATTGCGCTGGTCGCGGTGCGCCTGAGCCGTCGCCCGGCCGACGCGCGTCGCACCTATGGCTAT GTGCGGCTCGAAGCGCTTGGCGCATTGGCCAACGGCGCGCTGCTGTTCGCAGTCGGCGCCTATATCTTGTGGGAAGCCGC GCAGCGCTTTCGCGCACCGCAGGACATCTCTTCCAGCGGCATGCTGTTGATCGCCGGCTTCGGCCTGGTGATCAATCTGG TCGCGATGAAGCTGCTGCACGCCGGCAGCGGCGAAAGCCTCAACGTCAAGGGTGCCTATCTGGAGGTGTGGAGCGACATG CTCGGCTCGGTGGCGGTGATCGTCGGTGCCTTGCTGATCCGCTGGACCGGCTGGCAATGGATCGACCCGGTGTTGGCCGT GCTGATCGGCCTGTGGGTATTGCCGCGCACCTGGGTGCTGCTGCGCGAGGCGATCAACGTGTTGCTTGAAGGCGTGCCCA AGGGGATCGACCTGGCCCAGGTGCAGCAGGCGCTGACCAGCCACCCTGGCGTCGAAGACGTGCACGACCTGCATGTGTGG GCATTGGCCTCCAGCACGCCGGCGCTCACCGCGCACATCGTGGTCAACGAGGCCACCGACCGCGACCGTCTGCGTGACGC GCTCGGCGCCCTGTTGCATGAGCGCTTCGATATCGCCCACGTCACCTTGCAGGTGGAAAGTGGCGACTGCGGTACTGAGC CTTGCGGCACACCAAAGCCGGCTGCAGACGCTGGCCATGACGCGCACCATGAGCACGGTCATGCGCACGGGCATTCCCAT CATTAA
Upstream 100 bases:
>100_bases CCGCACGGCTCGCGTGATGTGATGTCATTACGCACAGGTGTAATAGTCTCCGCCATCGCGTGCGCCTAAGGTGCGCGCAT TGCAGCAGGCCACGATATCC
Downstream 100 bases:
>100_bases CGTCTGGTAGCAGCAGCTCGGCAGGTCATCAAATTAGCGTGGATCGACCGGCACAATCCACGGAAAGGGTCCGGCACTGG CGCAACCTACCTAGCGCAAC
Product: cobalt-zinc-cadmium resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MGHDHNHAPSEIRHEAPLWWALGLTATFLLAEIVGAFVTNSLALLSDAAHMATDTVGLMIALVAVRLSRRPADARRTYGY VRLEALGALANGALLFAVGAYILWEAAQRFRAPQDISSSGMLLIAGFGLVINLVAMKLLHAGSGESLNVKGAYLEVWSDM LGSVAVIVGALLIRWTGWQWIDPVLAVLIGLWVLPRTWVLLREAINVLLEGVPKGIDLAQVQQALTSHPGVEDVHDLHVW ALASSTPALTAHIVVNEATDRDRLRDALGALLHERFDIAHVTLQVESGDCGTEPCGTPKPAADAGHDAHHEHGHAHGHSH H
Sequences:
>Translated_321_residues MGHDHNHAPSEIRHEAPLWWALGLTATFLLAEIVGAFVTNSLALLSDAAHMATDTVGLMIALVAVRLSRRPADARRTYGY VRLEALGALANGALLFAVGAYILWEAAQRFRAPQDISSSGMLLIAGFGLVINLVAMKLLHAGSGESLNVKGAYLEVWSDM LGSVAVIVGALLIRWTGWQWIDPVLAVLIGLWVLPRTWVLLREAINVLLEGVPKGIDLAQVQQALTSHPGVEDVHDLHVW ALASSTPALTAHIVVNEATDRDRLRDALGALLHERFDIAHVTLQVESGDCGTEPCGTPKPAADAGHDAHHEHGHAHGHSH H >Mature_320_residues GHDHNHAPSEIRHEAPLWWALGLTATFLLAEIVGAFVTNSLALLSDAAHMATDTVGLMIALVAVRLSRRPADARRTYGYV RLEALGALANGALLFAVGAYILWEAAQRFRAPQDISSSGMLLIAGFGLVINLVAMKLLHAGSGESLNVKGAYLEVWSDML GSVAVIVGALLIRWTGWQWIDPVLAVLIGLWVLPRTWVLLREAINVLLEGVPKGIDLAQVQQALTSHPGVEDVHDLHVWA LASSTPALTAHIVVNEATDRDRLRDALGALLHERFDIAHVTLQVESGDCGTEPCGTPKPAADAGHDAHHEHGHAHGHSHH
Specific function: Necessary for activation of the czc determinant [H]
COG id: COG1230
COG function: function code P; Co/Zn/Cd efflux system component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. SLC30A subfamily [H]
Homologues:
Organism=Homo sapiens, GI52352805, Length=315, Percent_Identity=29.8412698412698, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI21361112, Length=304, Percent_Identity=29.9342105263158, Blast_Score=134, Evalue=8e-32, Organism=Homo sapiens, GI289803013, Length=295, Percent_Identity=27.7966101694915, Blast_Score=128, Evalue=8e-30, Organism=Homo sapiens, GI289803009, Length=295, Percent_Identity=27.7966101694915, Blast_Score=128, Evalue=8e-30, Organism=Homo sapiens, GI289803007, Length=295, Percent_Identity=27.7966101694915, Blast_Score=128, Evalue=8e-30, Organism=Homo sapiens, GI289803003, Length=295, Percent_Identity=27.7966101694915, Blast_Score=128, Evalue=8e-30, Organism=Homo sapiens, GI64762489, Length=295, Percent_Identity=27.7966101694915, Blast_Score=128, Evalue=9e-30, Organism=Homo sapiens, GI21359890, Length=319, Percent_Identity=27.5862068965517, Blast_Score=127, Evalue=1e-29, Organism=Homo sapiens, GI14210520, Length=234, Percent_Identity=29.0598290598291, Blast_Score=111, Evalue=8e-25, Organism=Homo sapiens, GI20070323, Length=315, Percent_Identity=26.6666666666667, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI52351208, Length=157, Percent_Identity=33.1210191082803, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI52352803, Length=136, Percent_Identity=39.7058823529412, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI222080086, Length=119, Percent_Identity=31.9327731092437, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI40255009, Length=119, Percent_Identity=31.9327731092437, Blast_Score=74, Evalue=2e-13, Organism=Escherichia coli, GI1786966, Length=280, Percent_Identity=43.2142857142857, Blast_Score=194, Evalue=8e-51, Organism=Escherichia coli, GI1790349, Length=245, Percent_Identity=24.4897959183673, Blast_Score=69, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17555794, Length=324, Percent_Identity=33.0246913580247, Blast_Score=174, Evalue=4e-44, Organism=Caenorhabditis elegans, GI17555796, Length=313, Percent_Identity=33.5463258785943, Blast_Score=172, Evalue=2e-43, Organism=Caenorhabditis elegans, GI193210990, Length=328, Percent_Identity=30.4878048780488, Blast_Score=164, Evalue=8e-41, Organism=Caenorhabditis elegans, GI32564488, Length=295, Percent_Identity=29.8305084745763, Blast_Score=129, Evalue=3e-30, Organism=Caenorhabditis elegans, GI17550442, Length=120, Percent_Identity=35, Blast_Score=77, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17550440, Length=120, Percent_Identity=35, Blast_Score=77, Evalue=9e-15, Organism=Saccharomyces cerevisiae, GI6320411, Length=173, Percent_Identity=30.0578034682081, Blast_Score=90, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6323899, Length=128, Percent_Identity=40.625, Blast_Score=89, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6324892, Length=126, Percent_Identity=39.6825396825397, Blast_Score=80, Evalue=3e-16, Organism=Drosophila melanogaster, GI24583858, Length=314, Percent_Identity=30.5732484076433, Blast_Score=145, Evalue=3e-35, Organism=Drosophila melanogaster, GI24656728, Length=323, Percent_Identity=28.7925696594427, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI24656724, Length=323, Percent_Identity=28.7925696594427, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI24656720, Length=323, Percent_Identity=28.7925696594427, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI24656715, Length=323, Percent_Identity=28.7925696594427, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI21357035, Length=323, Percent_Identity=28.7925696594427, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI24584409, Length=151, Percent_Identity=33.112582781457, Blast_Score=98, Evalue=8e-21, Organism=Drosophila melanogaster, GI28574430, Length=151, Percent_Identity=33.112582781457, Blast_Score=98, Evalue=8e-21, Organism=Drosophila melanogaster, GI24585900, Length=145, Percent_Identity=36.551724137931, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24585898, Length=145, Percent_Identity=36.551724137931, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24585896, Length=145, Percent_Identity=36.551724137931, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI19921672, Length=145, Percent_Identity=36.551724137931, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24645863, Length=110, Percent_Identity=33.6363636363636, Blast_Score=76, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 34511; Mature: 34380
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHDHNHAPSEIRHEAPLWWALGLTATFLLAEIVGAFVTNSLALLSDAAHMATDTVGLMI CCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALVAVRLSRRPADARRTYGYVRLEALGALANGALLFAVGAYILWEAAQRFRAPQDISSSG HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC MLLIAGFGLVINLVAMKLLHAGSGESLNVKGAYLEVWSDMLGSVAVIVGALLIRWTGWQW EEEEHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH IDPVLAVLIGLWVLPRTWVLLREAINVLLEGVPKGIDLAQVQQALTSHPGVEDVHDLHVW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHE ALASSTPALTAHIVVNEATDRDRLRDALGALLHERFDIAHVTLQVESGDCGTEPCGTPKP EEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCEEEEEEEEECCCCCCCCCCCCCC AADAGHDAHHEHGHAHGHSHH CCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GHDHNHAPSEIRHEAPLWWALGLTATFLLAEIVGAFVTNSLALLSDAAHMATDTVGLMI CCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALVAVRLSRRPADARRTYGYVRLEALGALANGALLFAVGAYILWEAAQRFRAPQDISSSG HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC MLLIAGFGLVINLVAMKLLHAGSGESLNVKGAYLEVWSDMLGSVAVIVGALLIRWTGWQW EEEEHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH IDPVLAVLIGLWVLPRTWVLLREAINVLLEGVPKGIDLAQVQQALTSHPGVEDVHDLHVW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHE ALASSTPALTAHIVVNEATDRDRLRDALGALLHERFDIAHVTLQVESGDCGTEPCGTPKP EEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCEEEEEEEEECCCCCCCCCCCCCC AADAGHDAHHEHGHAHGHSHH CCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8829543 [H]