| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is hsp90xc [H]
Identifier: 21242020
GI number: 21242020
Start: 1448098
End: 1449966
Strand: Direct
Name: hsp90xc [H]
Synonym: XAC1267
Alternate gene names: 21242020
Gene position: 1448098-1449966 (Clockwise)
Preceding gene: 21242019
Following gene: 21242021
Centisome position: 27.98
GC content: 66.4
Gene sequence:
>1869_bases ATGCAAGATCCCACTCCCGGGGCGACCGACGCCTCGCAGATCCGCCGGGCAGGCGTCGATCTCAATGGACTGATGTCGGT CCTCAGCAAGCACCTGTATTCCACCCCGGTGGTGGCGCTGCGCGAGTTGGTGCAGAACGCGCACGATTCCATCCTGCGTC GTCGTCTGGAACAACCCGATTGGGACGGCGAATCGCGCATCGAGGTGCATGCCGATACCGCGCAGGGCATCGTGCGCATC GTCGATACCGGTGCCGGACTGACCCAGCAGGAGATCCACGACTACCTGGCTACCGTGGGCGTGGGATATACGCGCGGGCT GCGCCAGGGCGGCCACGAGGACAGCGGCCTGATCGGCATGTTCGGGCTGGGTTTCTTGTCCGCCTTCGTGCTGGCGCGGC GGGTGACCGTGCGCACCACCTCCTACCAGTCCCCCACGCTGGGCCATTGCTACATCTCCAGCAACGCCGAGCAGTACACG GTCAGCCCGATTCCTGCGCGTGCGCAGGTGGGCACCGAGGTGGTGCTGGAGTTGCACAGCGACTATCTGTCGTTGGCTCA GGAAGGACGGCTGCGCGAGATTCTGTCGCGCTATTGCGCGCTGTTGCGCGAGCCGATCTGGATCGGCGCTGCGACGCAGC CGATCAATCCCGAGCCGCCGCCGTGGCGCGTGCAGGACGCCGCACCGCTGCATCCGGTGCAGGCCTGGCGCCGTCAACGC GAGTTCGCCGCGCGCTTCGAGCGCAATTTCGAGCCGTTGTGCTGCATGCCGGTACGTGCGGAAGAGGGCAGCGATGCAGT CGGCCTGCTGTGGGTGCAGGACGGTGCGACCTACGGCACCAGCGACAACCGCAATCTCTCGGTCTTCCTGCGCGGCATGT TGCTGGATGACAACGCGCGCGAACTGCTGCCGCCGTGGGCGGGCTTCATCGGTGGGGTGATCGAATCCAATCGGTTGACG CCTACCGCAAGCCGCGAGGATCTGCAGCGCGATACGGTCTATAGCGCGGTGCAGCACGCCTTGTCCGAAGCCTTGGTGCA GGGCCTGGCCGATGTGGCGCGTCAGCAACCGGAGGCATGGCGACGCATCCTGCTGCGGCATAACGAAGCCCTGCTGGGCG CAGCGTTGTGCGATGAGCGCCTGTTCGGATTACTGCTGGAACACGTGCGGGTACCGACATCGCAAGGCGATCTGCCGGCA CAGCAATTGCCATCGCGCGGCGCGGTGCACGTGATCCTCGATAGCGACAGCGGTTTCGAAGAAATGCTGTTCCGCGCGAT GGGCGTGCCGGTCGCCTATGGCAACCGGTATGCGGTGGTGCCGTTTCTGCGGCGCTGGGCGCAGGCCAAGGGTGTGCGTC TGGTCGAGCTGGGCACCGAGCAGGGCAACCGCCAGCTGTTCCACCTCGATACGCTGCCGGCCGACGAACTGGCCTGGCTG GAACAGCATTTGGGCGATGGCGAAGCGCTGGTGCCTGCGCGTTTCAGTCCGCAGGAACTGCCGTTGGTGGTAGTGCCCGA CCGCGAGGCCGAGCTCAAACGCCGCCTGGAGCAGGACGAGAGCGACAAGCGCGTGTCCACCGCCGCGTTGCGCCTGGCGC GGCAGTTCACCGCGCGCATCGAAGCGCGGCAGACCCAGCGGCTGTATCTGAATCTGGATAATCCCGCGCTGCAGGCCTTG CTGGACGCGCAGCGCGCAGGCAACCCACAGGCAGCGGTGGCGGCACGCTTGCTGCGCGCGCTCAAGGTGATCGTCTCGGC GCAAGGGCGCACGCAGCCGCAGGCGGGCAGCACCGAATCGGGCGTTTCCGATCTCAACAAGGCCTTCGGCGATTTCGCTG GGACCGTGACCCAATTGCTGGCGCGCTGA
Upstream 100 bases:
>100_bases CGTGCAATGTGGGGTTCCGGCTATCCTTTCCGGCTGGCACTGGCACCCAGGGGGACGCGTCCGAGGATGGGCGTCGTCGC CGAGGAAACGACGACCGATC
Downstream 100 bases:
>100_bases GCGCCGCATCGCAGGAGCGACACGATGGAAATCTGGAACTGGGTAGAAAAGCTGCAGGACGATCTGGGCGAAGCCGGCCA GCCGCAAAATGCGCAGCTGC
Product: Hsp90xo protein
Products: NA
Alternate protein names: Heat shock protein htpG; High temperature protein G [H]
Number of amino acids: Translated: 622; Mature: 622
Protein sequence:
>622_residues MQDPTPGATDASQIRRAGVDLNGLMSVLSKHLYSTPVVALRELVQNAHDSILRRRLEQPDWDGESRIEVHADTAQGIVRI VDTGAGLTQQEIHDYLATVGVGYTRGLRQGGHEDSGLIGMFGLGFLSAFVLARRVTVRTTSYQSPTLGHCYISSNAEQYT VSPIPARAQVGTEVVLELHSDYLSLAQEGRLREILSRYCALLREPIWIGAATQPINPEPPPWRVQDAAPLHPVQAWRRQR EFAARFERNFEPLCCMPVRAEEGSDAVGLLWVQDGATYGTSDNRNLSVFLRGMLLDDNARELLPPWAGFIGGVIESNRLT PTASREDLQRDTVYSAVQHALSEALVQGLADVARQQPEAWRRILLRHNEALLGAALCDERLFGLLLEHVRVPTSQGDLPA QQLPSRGAVHVILDSDSGFEEMLFRAMGVPVAYGNRYAVVPFLRRWAQAKGVRLVELGTEQGNRQLFHLDTLPADELAWL EQHLGDGEALVPARFSPQELPLVVVPDREAELKRRLEQDESDKRVSTAALRLARQFTARIEARQTQRLYLNLDNPALQAL LDAQRAGNPQAAVAARLLRALKVIVSAQGRTQPQAGSTESGVSDLNKAFGDFAGTVTQLLAR
Sequences:
>Translated_622_residues MQDPTPGATDASQIRRAGVDLNGLMSVLSKHLYSTPVVALRELVQNAHDSILRRRLEQPDWDGESRIEVHADTAQGIVRI VDTGAGLTQQEIHDYLATVGVGYTRGLRQGGHEDSGLIGMFGLGFLSAFVLARRVTVRTTSYQSPTLGHCYISSNAEQYT VSPIPARAQVGTEVVLELHSDYLSLAQEGRLREILSRYCALLREPIWIGAATQPINPEPPPWRVQDAAPLHPVQAWRRQR EFAARFERNFEPLCCMPVRAEEGSDAVGLLWVQDGATYGTSDNRNLSVFLRGMLLDDNARELLPPWAGFIGGVIESNRLT PTASREDLQRDTVYSAVQHALSEALVQGLADVARQQPEAWRRILLRHNEALLGAALCDERLFGLLLEHVRVPTSQGDLPA QQLPSRGAVHVILDSDSGFEEMLFRAMGVPVAYGNRYAVVPFLRRWAQAKGVRLVELGTEQGNRQLFHLDTLPADELAWL EQHLGDGEALVPARFSPQELPLVVVPDREAELKRRLEQDESDKRVSTAALRLARQFTARIEARQTQRLYLNLDNPALQAL LDAQRAGNPQAAVAARLLRALKVIVSAQGRTQPQAGSTESGVSDLNKAFGDFAGTVTQLLAR >Mature_622_residues MQDPTPGATDASQIRRAGVDLNGLMSVLSKHLYSTPVVALRELVQNAHDSILRRRLEQPDWDGESRIEVHADTAQGIVRI VDTGAGLTQQEIHDYLATVGVGYTRGLRQGGHEDSGLIGMFGLGFLSAFVLARRVTVRTTSYQSPTLGHCYISSNAEQYT VSPIPARAQVGTEVVLELHSDYLSLAQEGRLREILSRYCALLREPIWIGAATQPINPEPPPWRVQDAAPLHPVQAWRRQR EFAARFERNFEPLCCMPVRAEEGSDAVGLLWVQDGATYGTSDNRNLSVFLRGMLLDDNARELLPPWAGFIGGVIESNRLT PTASREDLQRDTVYSAVQHALSEALVQGLADVARQQPEAWRRILLRHNEALLGAALCDERLFGLLLEHVRVPTSQGDLPA QQLPSRGAVHVILDSDSGFEEMLFRAMGVPVAYGNRYAVVPFLRRWAQAKGVRLVELGTEQGNRQLFHLDTLPADELAWL EQHLGDGEALVPARFSPQELPLVVVPDREAELKRRLEQDESDKRVSTAALRLARQFTARIEARQTQRLYLNLDNPALQAL LDAQRAGNPQAAVAARLLRALKVIVSAQGRTQPQAGSTESGVSDLNKAFGDFAGTVTQLLAR
Specific function: Molecular chaperone. Has ATPase activity [H]
COG id: COG0326
COG function: function code O; Molecular chaperone, HSP90 family
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 90 family [H]
Homologues:
Organism=Homo sapiens, GI155722983, Length=359, Percent_Identity=24.5125348189415, Blast_Score=129, Evalue=7e-30, Organism=Homo sapiens, GI4507677, Length=424, Percent_Identity=22.6415094339623, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI153792590, Length=192, Percent_Identity=29.1666666666667, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI20149594, Length=196, Percent_Identity=28.5714285714286, Blast_Score=81, Evalue=4e-15, Organism=Homo sapiens, GI154146191, Length=192, Percent_Identity=29.1666666666667, Blast_Score=80, Evalue=4e-15, Organism=Escherichia coli, GI1786679, Length=367, Percent_Identity=28.6103542234332, Blast_Score=141, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17559162, Length=434, Percent_Identity=22.8110599078341, Blast_Score=106, Evalue=4e-23, Organism=Caenorhabditis elegans, GI115535167, Length=363, Percent_Identity=22.3140495867769, Blast_Score=105, Evalue=9e-23, Organism=Caenorhabditis elegans, GI115535205, Length=363, Percent_Identity=22.3140495867769, Blast_Score=104, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17542208, Length=369, Percent_Identity=23.3062330623306, Blast_Score=97, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6325016, Length=410, Percent_Identity=22.6829268292683, Blast_Score=106, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6323840, Length=397, Percent_Identity=22.6700251889169, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI24586016, Length=360, Percent_Identity=25.2777777777778, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI21357739, Length=384, Percent_Identity=23.9583333333333, Blast_Score=99, Evalue=9e-21, Organism=Drosophila melanogaster, GI17647529, Length=192, Percent_Identity=29.1666666666667, Blast_Score=86, Evalue=5e-17,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 2419 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR001404 - InterPro: IPR020575 - InterPro: IPR020568 [H]
Pfam domain/function: PF02518 HATPase_c; PF00183 HSP90 [H]
EC number: NA
Molecular weight: Translated: 68656; Mature: 68656
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDPTPGATDASQIRRAGVDLNGLMSVLSKHLYSTPVVALRELVQNAHDSILRRRLEQPD CCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC WDGESRIEVHADTAQGIVRIVDTGAGLTQQEIHDYLATVGVGYTRGLRQGGHEDSGLIGM CCCCCEEEEECCHHHHHEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHH FGLGFLSAFVLARRVTVRTTSYQSPTLGHCYISSNAEQYTVSPIPARAQVGTEVVLELHS HHHHHHHHHHHHHHHHEEECCCCCCCCEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHH DYLSLAQEGRLREILSRYCALLREPIWIGAATQPINPEPPPWRVQDAAPLHPVQAWRRQR HHHHHHHCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH EFAARFERNFEPLCCMPVRAEEGSDAVGLLWVQDGATYGTSDNRNLSVFLRGMLLDDNAR HHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEECCCEECCCCCCCEEEEEEEEEECCCCH ELLPPWAGFIGGVIESNRLTPTASREDLQRDTVYSAVQHALSEALVQGLADVARQQPEAW HHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH RRILLRHNEALLGAALCDERLFGLLLEHVRVPTSQGDLPAQQLPSRGAVHVILDSDSGFE HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCEEEEECCCCCHH EMLFRAMGVPVAYGNRYAVVPFLRRWAQAKGVRLVELGTEQGNRQLFHLDTLPADELAWL HHHHHHHCCCEEECCCEEHHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCHHHHHHH EQHLGDGEALVPARFSPQELPLVVVPDREAELKRRLEQDESDKRVSTAALRLARQFTARI HHHCCCCCEECCCCCCCCCCCEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH EARQTQRLYLNLDNPALQALLDAQRAGNPQAAVAARLLRALKVIVSAQGRTQPQAGSTES HHHCCEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH GVSDLNKAFGDFAGTVTQLLAR HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQDPTPGATDASQIRRAGVDLNGLMSVLSKHLYSTPVVALRELVQNAHDSILRRRLEQPD CCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC WDGESRIEVHADTAQGIVRIVDTGAGLTQQEIHDYLATVGVGYTRGLRQGGHEDSGLIGM CCCCCEEEEECCHHHHHEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHH FGLGFLSAFVLARRVTVRTTSYQSPTLGHCYISSNAEQYTVSPIPARAQVGTEVVLELHS HHHHHHHHHHHHHHHHEEECCCCCCCCEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHH DYLSLAQEGRLREILSRYCALLREPIWIGAATQPINPEPPPWRVQDAAPLHPVQAWRRQR HHHHHHHCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH EFAARFERNFEPLCCMPVRAEEGSDAVGLLWVQDGATYGTSDNRNLSVFLRGMLLDDNAR HHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEECCCEECCCCCCCEEEEEEEEEECCCCH ELLPPWAGFIGGVIESNRLTPTASREDLQRDTVYSAVQHALSEALVQGLADVARQQPEAW HHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH RRILLRHNEALLGAALCDERLFGLLLEHVRVPTSQGDLPAQQLPSRGAVHVILDSDSGFE HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCEEEEECCCCCHH EMLFRAMGVPVAYGNRYAVVPFLRRWAQAKGVRLVELGTEQGNRQLFHLDTLPADELAWL HHHHHHHCCCEEECCCEEHHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCHHHHHHH EQHLGDGEALVPARFSPQELPLVVVPDREAELKRRLEQDESDKRVSTAALRLARQFTARI HHHCCCCCEECCCCCCCCCCCEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH EARQTQRLYLNLDNPALQALLDAQRAGNPQAAVAARLLRALKVIVSAQGRTQPQAGSTES HHHCCEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH GVSDLNKAFGDFAGTVTQLLAR HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12093901 [H]