| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242015
Identifier: 21242015
GI number: 21242015
Start: 1440126
End: 1441823
Strand: Direct
Name: 21242015
Synonym: XAC1262
Alternate gene names: NA
Gene position: 1440126-1441823 (Clockwise)
Preceding gene: 21242014
Following gene: 21242016
Centisome position: 27.83
GC content: 62.9
Gene sequence:
>1698_bases ATGACGCTGCTATACCCGCAGTGGATTCCCGGCAACCATTCGCCGACCGGACCGATCGACAAGCTTGCCGGTCTGGTGAT CAAGGTCGATGGCAAGGTGGTGCCCTGGAAGCGCGACCAGTTCGACGTCTATGCGTTCAAGGTGGATGTGCCACAAGGCG CCACCGAGCTGACGGCCGAGTTCAAGTTCCTCTCGCCGCAGGCCGGCAACCAGGGCCGGGTGATGATGACCCCGGAAATG CTCAACCTGCAGTGGAACACCACGGCGCTGTACCCGGCCGGTTATTTCGCGCGCAACATCAAGGCGCAGGCCAGCGTCAC GCTGCCGGCCGGCTGGAGCTATGCCACGGCACTGGAAACCGATCGCCGCGTCGGCGACACGGTGAGCTTCAAGCCGATCG ATTTCGACGACCTGGTCGATTCGCCGATGTTCGCCGGCAAGTACTACAAGCGCGTGGAACTGAGCACCGGCAAGCAGCCG GTCTATCTCAACGTGTTCGCCGATGAAGCCAAATCGTTGGAGGCCAAGCCCGAGCAGATCAAGGCGCATGCTGCGTTGGT GCAGCAGATGGACAAGCTGTACGGCGCGCGTCATTTCGACCATTACGAATTCCTGCTGGCGCTGACCAAGAAGCTGGGCG GCATCGGCCTGGAGCATCACCGTTCCAGCGAAAACAGCGGCCCGCCGAATTACTTCACCGAGTGGGACAAGAGCTGGACC ATGCGCGACCTGCTGGCGCACGAGTTCAACCACTCCTGGAACGGCAAGTACCGCCGTGGCGCCGACCTGGCAACGCCGAA CTTCAACGTGCCGATGGGCGACAGCCTGTTGTGGCTGTACGAAGGCCAGACCCAGTTCTGGGGCGAAGTGGTGGCGGCCC GTTCGGGCCTGTGGACGCAGGACCAGGCGCGCGACATGCTGGCCGGCGTCGCGGCAACCTACGAGCGCGGCCGCCCCGGC ATGGCCTGGCGCACGGTGCAGGACACCACCAACGACCCGACCATGTCGATGCGGCGTCCGAAGGCGTACCGCAGCTATCA GATGAGCGAGGACTATTACTCCGGCGGCCAGATGATGTGGCTGGAAGTGGATAGCAAGCTGCGCGCGCTCACCAACAACA AGCGCTCCATCGACGATTTCGCCAAGGCGTTCTTCGGCATGAAGAACGGCGATTGGGACGTCAATCCGTACACCTTCGAC GACATCGTGAGCACGCTCAACGGCGTGGCCGCATACGACTGGGCCAGCCTGTTGCGCGAGCGCATGGACGGGCACGGTTC GTTGAACGGCGGCATCGAAGCCAACGGCTGGAAGCTGGTCTACAACGACGAGCCGAACCTGGCGATCAAGACCTACGAGA GCAACGAGAACGACGTCAGCCTGACCTATTCGCTGGGCCTGTCGCTGGAAGGCTCGGGTGAAGTCAACGAGGTGTTATGG GACAGCCCGGCGTTCAATGCCGGCATCATCAACGGCAACACCCTGGTGGCCGTCAACGGCCGCGCCTTCAGCGCCGATGT GATCAAGGATGCGATCAAGGCGGCCAAGGGCACCACTGCGCCGATCGAACTGCTGGTCAAGCGCGGCGACCGCTACGAAA CCGTCCGCATCGACTACCACGGCGGTCTGCTGTATCCGCATCTGGAACGCGTCGCCGGCAAGCCGGATCGCCTGAGCGAG TTGTACAAGGCGCGCTAA
Upstream 100 bases:
>100_bases CGTGCCGTTCGACGGCACCTTGAAGATCGACGTGGATGCCACCGATCTGGCGCACCGCATCTTCAAGGTCAAGACCACCA TGCCGGCCAAGCCGGGCCCG
Downstream 100 bases:
>100_bases GTGGCGCACGCCCACGTCGTTGACCGGCGTGGGATCGGTGGAATCCAAGCGGCATGGCCGGTCTTCACCGGTCATGCCGC TGTTGTGTGAGCGCAGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Peptidase M; Glycyl Aminopeptidase; M61 Family Peptidase; M61 Glycyl Aminopeptidase; Pdz/Dhr/Glgf; Glycyl Aminopeptidase Protein; Protease; PDZ Domain Family Protein; Trypsin-Like Serine Protease; PDZ/DHR/GLGFPeptidase M; Aminopeptidase N Family Protein; Protease With C-Terminal PDZ Domain; Metallopeptidase; Aminopeptidase; M61 Glycyl Aminopeptidase Protein
Number of amino acids: Translated: 565; Mature: 564
Protein sequence:
>565_residues MTLLYPQWIPGNHSPTGPIDKLAGLVIKVDGKVVPWKRDQFDVYAFKVDVPQGATELTAEFKFLSPQAGNQGRVMMTPEM LNLQWNTTALYPAGYFARNIKAQASVTLPAGWSYATALETDRRVGDTVSFKPIDFDDLVDSPMFAGKYYKRVELSTGKQP VYLNVFADEAKSLEAKPEQIKAHAALVQQMDKLYGARHFDHYEFLLALTKKLGGIGLEHHRSSENSGPPNYFTEWDKSWT MRDLLAHEFNHSWNGKYRRGADLATPNFNVPMGDSLLWLYEGQTQFWGEVVAARSGLWTQDQARDMLAGVAATYERGRPG MAWRTVQDTTNDPTMSMRRPKAYRSYQMSEDYYSGGQMMWLEVDSKLRALTNNKRSIDDFAKAFFGMKNGDWDVNPYTFD DIVSTLNGVAAYDWASLLRERMDGHGSLNGGIEANGWKLVYNDEPNLAIKTYESNENDVSLTYSLGLSLEGSGEVNEVLW DSPAFNAGIINGNTLVAVNGRAFSADVIKDAIKAAKGTTAPIELLVKRGDRYETVRIDYHGGLLYPHLERVAGKPDRLSE LYKAR
Sequences:
>Translated_565_residues MTLLYPQWIPGNHSPTGPIDKLAGLVIKVDGKVVPWKRDQFDVYAFKVDVPQGATELTAEFKFLSPQAGNQGRVMMTPEM LNLQWNTTALYPAGYFARNIKAQASVTLPAGWSYATALETDRRVGDTVSFKPIDFDDLVDSPMFAGKYYKRVELSTGKQP VYLNVFADEAKSLEAKPEQIKAHAALVQQMDKLYGARHFDHYEFLLALTKKLGGIGLEHHRSSENSGPPNYFTEWDKSWT MRDLLAHEFNHSWNGKYRRGADLATPNFNVPMGDSLLWLYEGQTQFWGEVVAARSGLWTQDQARDMLAGVAATYERGRPG MAWRTVQDTTNDPTMSMRRPKAYRSYQMSEDYYSGGQMMWLEVDSKLRALTNNKRSIDDFAKAFFGMKNGDWDVNPYTFD DIVSTLNGVAAYDWASLLRERMDGHGSLNGGIEANGWKLVYNDEPNLAIKTYESNENDVSLTYSLGLSLEGSGEVNEVLW DSPAFNAGIINGNTLVAVNGRAFSADVIKDAIKAAKGTTAPIELLVKRGDRYETVRIDYHGGLLYPHLERVAGKPDRLSE LYKAR >Mature_564_residues TLLYPQWIPGNHSPTGPIDKLAGLVIKVDGKVVPWKRDQFDVYAFKVDVPQGATELTAEFKFLSPQAGNQGRVMMTPEML NLQWNTTALYPAGYFARNIKAQASVTLPAGWSYATALETDRRVGDTVSFKPIDFDDLVDSPMFAGKYYKRVELSTGKQPV YLNVFADEAKSLEAKPEQIKAHAALVQQMDKLYGARHFDHYEFLLALTKKLGGIGLEHHRSSENSGPPNYFTEWDKSWTM RDLLAHEFNHSWNGKYRRGADLATPNFNVPMGDSLLWLYEGQTQFWGEVVAARSGLWTQDQARDMLAGVAATYERGRPGM AWRTVQDTTNDPTMSMRRPKAYRSYQMSEDYYSGGQMMWLEVDSKLRALTNNKRSIDDFAKAFFGMKNGDWDVNPYTFDD IVSTLNGVAAYDWASLLRERMDGHGSLNGGIEANGWKLVYNDEPNLAIKTYESNENDVSLTYSLGLSLEGSGEVNEVLWD SPAFNAGIINGNTLVAVNGRAFSADVIKDAIKAAKGTTAPIELLVKRGDRYETVRIDYHGGLLYPHLERVAGKPDRLSEL YKAR
Specific function: Unknown
COG id: COG3975
COG function: function code R; Predicted protease with the C-terminal PDZ domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63412; Mature: 63281
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: PS50106 PDZ ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLYPQWIPGNHSPTGPIDKLAGLVIKVDGKVVPWKRDQFDVYAFKVDVPQGATELTAE CCEECCCCCCCCCCCCCCHHHHCCEEEEECCEEECCCCCCEEEEEEEEECCCCCHHHEEE FKFLSPQAGNQGRVMMTPEMLNLQWNTTALYPAGYFARNIKAQASVTLPAGWSYATALET EEEECCCCCCCCEEEECHHHEEEEECCEEECCCHHHHHCCCCEEEEEECCCCCCHHHHHC DRRVGDTVSFKPIDFDDLVDSPMFAGKYYKRVELSTGKQPVYLNVFADEAKSLEAKPEQI CCCCCCCCEECCCCHHHHHCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCHHHH KAHAALVQQMDKLYGARHFDHYEFLLALTKKLGGIGLEHHRSSENSGPPNYFTEWDKSWT HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCH MRDLLAHEFNHSWNGKYRRGADLATPNFNVPMGDSLLWLYEGQTQFWGEVVAARSGLWTQ HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCH DQARDMLAGVAATYERGRPGMAWRTVQDTTNDPTMSMRRPKAYRSYQMSEDYYSGGQMMW HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCHHHCCCEEEE LEVDSKLRALTNNKRSIDDFAKAFFGMKNGDWDVNPYTFDDIVSTLNGVAAYDWASLLRE EEECCHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHCCHHHHHHHHHHHH RMDGHGSLNGGIEANGWKLVYNDEPNLAIKTYESNENDVSLTYSLGLSLEGSGEVNEVLW HCCCCCCCCCCEECCCEEEEECCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCHHHHHC DSPAFNAGIINGNTLVAVNGRAFSADVIKDAIKAAKGTTAPIELLVKRGDRYETVRIDYH CCCCCCCEEECCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEEEC GGLLYPHLERVAGKPDRLSELYKAR CCCCCHHHHHHCCCCHHHHHHHHCC >Mature Secondary Structure TLLYPQWIPGNHSPTGPIDKLAGLVIKVDGKVVPWKRDQFDVYAFKVDVPQGATELTAE CEECCCCCCCCCCCCCCHHHHCCEEEEECCEEECCCCCCEEEEEEEEECCCCCHHHEEE FKFLSPQAGNQGRVMMTPEMLNLQWNTTALYPAGYFARNIKAQASVTLPAGWSYATALET EEEECCCCCCCCEEEECHHHEEEEECCEEECCCHHHHHCCCCEEEEEECCCCCCHHHHHC DRRVGDTVSFKPIDFDDLVDSPMFAGKYYKRVELSTGKQPVYLNVFADEAKSLEAKPEQI CCCCCCCCEECCCCHHHHHCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCHHHH KAHAALVQQMDKLYGARHFDHYEFLLALTKKLGGIGLEHHRSSENSGPPNYFTEWDKSWT HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCH MRDLLAHEFNHSWNGKYRRGADLATPNFNVPMGDSLLWLYEGQTQFWGEVVAARSGLWTQ HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCH DQARDMLAGVAATYERGRPGMAWRTVQDTTNDPTMSMRRPKAYRSYQMSEDYYSGGQMMW HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCHHHCCCEEEE LEVDSKLRALTNNKRSIDDFAKAFFGMKNGDWDVNPYTFDDIVSTLNGVAAYDWASLLRE EEECCHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHCCHHHHHHHHHHHH RMDGHGSLNGGIEANGWKLVYNDEPNLAIKTYESNENDVSLTYSLGLSLEGSGEVNEVLW HCCCCCCCCCCEECCCEEEEECCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCHHHHHC DSPAFNAGIINGNTLVAVNGRAFSADVIKDAIKAAKGTTAPIELLVKRGDRYETVRIDYH CCCCCCCEEECCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEEEC GGLLYPHLERVAGKPDRLSELYKAR CCCCCHHHHHHCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA