Click here to switch to the map view.

The map label for this gene is ybaW [C]

Identifier: 21242000

GI number: 21242000

Start: 1421836

End: 1422240

Strand: Reverse

Name: ybaW [C]

Synonym: XAC1246

Alternate gene names: 21242000

Gene position: 1422240-1421836 (Counterclockwise)

Preceding gene: 21242001

Following gene: 21241998

Centisome position: 27.48

GC content: 61.98

Gene sequence:

>405_bases
ATGAGCGAACACAAGATTCTGGCACGCATCCCGATCAGCGTGCGCTGGCGCGATATGGACAGCATGGGCCATGTCAACAA
CGCCAAGTACGTTTCCTATCTGGAAGAAGCGCGCGTGCGCTGGATGCTGGGCGTGCAAGGCGTGGCGATGACCGACCGCA
TCGCGCCGGTGGTTGCCGCCACCAATGTCAACTACAAGCAGCCGTTGATCTGGCCCAACGACATCACCGTCGAGTTGTTC
GTCGAACGCCTGGGCACCAGCAGCGTGACCATCGGCCACCGCATCTTCGACCAGAAGGACGACAGCAAGCTGTACTCCGA
TGGCAACGTGGTGGTGGTGTGGATCGATACGCAGACCGGCAAGAGCGCCGCGCTACCGGATGCGGTGCGCGCGGCCAGCA
GCTGA

Upstream 100 bases:

>100_bases
CCAACAAGCCTGATGCGCGTCCGCCGCGCAAGGTCAAACCGGAGAAGGTGGCCAAGGCTGCCAAATCCGCCACCAAGAAG
ACTGCGAAGAAGGCAAGCTG

Downstream 100 bases:

>100_bases
ATTCCCATCGACTCATTCGCTGAGGTTGCAGCAACGCGAAAGATCGGCGGCGGCTCCGTGTGGAGCCGCCGCTTTCATTT
CAATGCTGGCGCAAGTGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Thioesterase; Thioesterase Family Protein; Thioesterase Superfamily; Thioesterase Family Protein Domain Protein; Thioesterase/Thiol Ester Dehydrase-Isomerase; Acyl-CoA Hydrolase; Thiesterase; 4-Hydroxybenzoyl-CoA Thioesterase

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MSEHKILARIPISVRWRDMDSMGHVNNAKYVSYLEEARVRWMLGVQGVAMTDRIAPVVAATNVNYKQPLIWPNDITVELF
VERLGTSSVTIGHRIFDQKDDSKLYSDGNVVVVWIDTQTGKSAALPDAVRAASS

Sequences:

>Translated_134_residues
MSEHKILARIPISVRWRDMDSMGHVNNAKYVSYLEEARVRWMLGVQGVAMTDRIAPVVAATNVNYKQPLIWPNDITVELF
VERLGTSSVTIGHRIFDQKDDSKLYSDGNVVVVWIDTQTGKSAALPDAVRAASS
>Mature_133_residues
SEHKILARIPISVRWRDMDSMGHVNNAKYVSYLEEARVRWMLGVQGVAMTDRIAPVVAATNVNYKQPLIWPNDITVELFV
ERLGTSSVTIGHRIFDQKDDSKLYSDGNVVVVWIDTQTGKSAALPDAVRAASS

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14958; Mature: 14827

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEHKILARIPISVRWRDMDSMGHVNNAKYVSYLEEARVRWMLGVQGVAMTDRIAPVVAA
CCCCCEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHEEEEECCCCEEECCCCCEEEEE
TNVNYKQPLIWPNDITVELFVERLGTSSVTIGHRIFDQKDDSKLYSDGNVVVVWIDTQTG
CCCCCCCCEECCCCCCCEEEHHHHCCCCEEECHHCCCCCCCCEEECCCCEEEEEEECCCC
KSAALPDAVRAASS
CCCCCCHHHHCCCC
>Mature Secondary Structure 
SEHKILARIPISVRWRDMDSMGHVNNAKYVSYLEEARVRWMLGVQGVAMTDRIAPVVAA
CCCCEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHEEEEECCCCEEECCCCCEEEEE
TNVNYKQPLIWPNDITVELFVERLGTSSVTIGHRIFDQKDDSKLYSDGNVVVVWIDTQTG
CCCCCCCCEECCCCCCCEEEHHHHCCCCEEECHHCCCCCCCCEEECCCCEEEEEEECCCC
KSAALPDAVRAASS
CCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA