| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is yeaE [H]
Identifier: 21241966
GI number: 21241966
Start: 1386599
End: 1387453
Strand: Reverse
Name: yeaE [H]
Synonym: XAC1212
Alternate gene names: 21241966
Gene position: 1387453-1386599 (Counterclockwise)
Preceding gene: 21241967
Following gene: 21241965
Centisome position: 26.81
GC content: 65.26
Gene sequence:
>855_bases ATGTCCGAATCGTCTTCCCCTTCCTGCGCGCAGGTGCGCCTGCGCAACGGGCGTCGCGTGCCCGCGTTGGGTCTGGGCTC CTGGAACCTGGGCCAGGGCCGGCATGCGCCCGAGCAGGAAATCCAAGCGCTGCAACTCGGGCAGCAATTGGGCATGCAGC TGATCGACACCGCCGAGATGTATGGCAATGGCCGCTCGGAGCAATTGATCAGCCAGGCCATCGGCCGCACGCAACCGCCC TACGTGGTGTCCAAGGTGTTGCCCAGCAATGCCAGCGCGCGCGGGATTGCGCGTGCCTGCGAAGCCAGCCTGCAACGGCT GGGAGTGCGCACATTGGACCTGTACCTGTTGCACTGGCGTGGCGGCAGCGATCTGGCCGAAGTGGTGGACGCGTTCGAAG CGCTACGCGATGCCGGCAAGATCCGCGATTGGGGCGTGTCTAACTTCGACGTCGATGACATGGAGGAGCTCTGGGCAATC GATGGCGGCCCGCATTGCCTGGTCAACCAGGTGCTGTACCACGCTGGCAGCCGCGGCATCGAATTCGACCTGCTGCCCTG GTGCGCCGCGCACGAGGTAGCCGTGATGGCGTATTCGCCGCTTGGCAGCCGCGCGTTGCTGGATCATCCGGTCTTGCACG CCATCGGCCAGCGTCGTGGCGTTGCGGCCACTGCGGTGGCGCTTGCGTGGGCCATCCGCAGCGGCAATGTCATCGCCATT CCCGAATCCGGAACGCCGGCGCATGTGCGTGCCAATGCCGCTGCCTGCACGCTGCAATTGCACGCAGACGATCTTGCCGA AATCGATCGTGCGTTCGCGCCGCCTACGCGCAAACAGCCCTTGGATCTGCTGTAA
Upstream 100 bases:
>100_bases CATGCAGACACTGCGACAACATCGGTGCAGCCATCGTCGCAGTGACAAGGCCACCGATGTAACGGTCATCACCCTCATTC CAACGCGGCAGGAACCCGTC
Downstream 100 bases:
>100_bases ATGGCGCAATGGTCGCGTTCGCTGCCTCGCGAGTGCATGGCTATGTGCAACGCGTGACCGATGCAACATCCAACTGCGAC ATGGTGCAATGTTCGCTGCG
Product: oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MSESSSPSCAQVRLRNGRRVPALGLGSWNLGQGRHAPEQEIQALQLGQQLGMQLIDTAEMYGNGRSEQLISQAIGRTQPP YVVSKVLPSNASARGIARACEASLQRLGVRTLDLYLLHWRGGSDLAEVVDAFEALRDAGKIRDWGVSNFDVDDMEELWAI DGGPHCLVNQVLYHAGSRGIEFDLLPWCAAHEVAVMAYSPLGSRALLDHPVLHAIGQRRGVAATAVALAWAIRSGNVIAI PESGTPAHVRANAAACTLQLHADDLAEIDRAFAPPTRKQPLDLL
Sequences:
>Translated_284_residues MSESSSPSCAQVRLRNGRRVPALGLGSWNLGQGRHAPEQEIQALQLGQQLGMQLIDTAEMYGNGRSEQLISQAIGRTQPP YVVSKVLPSNASARGIARACEASLQRLGVRTLDLYLLHWRGGSDLAEVVDAFEALRDAGKIRDWGVSNFDVDDMEELWAI DGGPHCLVNQVLYHAGSRGIEFDLLPWCAAHEVAVMAYSPLGSRALLDHPVLHAIGQRRGVAATAVALAWAIRSGNVIAI PESGTPAHVRANAAACTLQLHADDLAEIDRAFAPPTRKQPLDLL >Mature_283_residues SESSSPSCAQVRLRNGRRVPALGLGSWNLGQGRHAPEQEIQALQLGQQLGMQLIDTAEMYGNGRSEQLISQAIGRTQPPY VVSKVLPSNASARGIARACEASLQRLGVRTLDLYLLHWRGGSDLAEVVDAFEALRDAGKIRDWGVSNFDVDDMEELWAID GGPHCLVNQVLYHAGSRGIEFDLLPWCAAHEVAVMAYSPLGSRALLDHPVLHAIGQRRGVAATAVALAWAIRSGNVIAIP ESGTPAHVRANAAACTLQLHADDLAEIDRAFAPPTRKQPLDLL
Specific function: Unknown
COG id: COG0656
COG function: function code R; Aldo/keto reductases, related to diketogulonate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI223468663, Length=294, Percent_Identity=28.5714285714286, Blast_Score=101, Evalue=9e-22, Organism=Homo sapiens, GI93277124, Length=300, Percent_Identity=26.3333333333333, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI24497577, Length=311, Percent_Identity=25.4019292604502, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI5174391, Length=311, Percent_Identity=25.4019292604502, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI310109922, Length=277, Percent_Identity=26.7148014440433, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI5453543, Length=297, Percent_Identity=25.9259259259259, Blast_Score=89, Evalue=6e-18, Organism=Homo sapiens, GI45446745, Length=297, Percent_Identity=25.9259259259259, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI4503285, Length=297, Percent_Identity=25.9259259259259, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI310109920, Length=297, Percent_Identity=25.9259259259259, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI291291012, Length=251, Percent_Identity=28.6852589641434, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI24497585, Length=306, Percent_Identity=24.8366013071895, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI24497583, Length=297, Percent_Identity=26.2626262626263, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI4502049, Length=296, Percent_Identity=26.0135135135135, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI5174695, Length=302, Percent_Identity=24.1721854304636, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI300116273, Length=280, Percent_Identity=25, Blast_Score=78, Evalue=1e-14, Organism=Escherichia coli, GI1788081, Length=271, Percent_Identity=46.4944649446494, Blast_Score=247, Evalue=8e-67, Organism=Escherichia coli, GI87082198, Length=265, Percent_Identity=28.3018867924528, Blast_Score=98, Evalue=5e-22, Organism=Escherichia coli, GI1786400, Length=270, Percent_Identity=28.8888888888889, Blast_Score=98, Evalue=7e-22, Organism=Escherichia coli, GI1788070, Length=301, Percent_Identity=27.906976744186, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI87081735, Length=308, Percent_Identity=26.6233766233766, Blast_Score=71, Evalue=9e-14, Organism=Escherichia coli, GI1787674, Length=281, Percent_Identity=27.4021352313167, Blast_Score=66, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17552492, Length=275, Percent_Identity=30.9090909090909, Blast_Score=110, Evalue=8e-25, Organism=Caenorhabditis elegans, GI17561298, Length=283, Percent_Identity=28.2685512367491, Blast_Score=97, Evalue=6e-21, Organism=Caenorhabditis elegans, GI17538386, Length=280, Percent_Identity=28.9285714285714, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17537077, Length=295, Percent_Identity=26.7796610169492, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17537075, Length=295, Percent_Identity=26.4406779661017, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17561300, Length=267, Percent_Identity=26.2172284644195, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17550248, Length=303, Percent_Identity=23.4323432343234, Blast_Score=81, Evalue=7e-16, Organism=Caenorhabditis elegans, GI71998625, Length=278, Percent_Identity=25.1798561151079, Blast_Score=80, Evalue=9e-16, Organism=Saccharomyces cerevisiae, GI6324694, Length=286, Percent_Identity=27.6223776223776, Blast_Score=95, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6320079, Length=286, Percent_Identity=25.1748251748252, Blast_Score=80, Evalue=5e-16, Organism=Drosophila melanogaster, GI24644950, Length=306, Percent_Identity=27.4509803921569, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI24662789, Length=302, Percent_Identity=29.4701986754967, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI45553081, Length=292, Percent_Identity=26.027397260274, Blast_Score=88, Evalue=8e-18, Organism=Drosophila melanogaster, GI21356425, Length=303, Percent_Identity=24.7524752475248, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24657054, Length=292, Percent_Identity=25.3424657534247, Blast_Score=81, Evalue=8e-16, Organism=Drosophila melanogaster, GI20129731, Length=293, Percent_Identity=25.5972696245734, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI24663317, Length=313, Percent_Identity=23.961661341853, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24662781, Length=285, Percent_Identity=24.2105263157895, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 30598; Mature: 30467
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESSSPSCAQVRLRNGRRVPALGLGSWNLGQGRHAPEQEIQALQLGQQLGMQLIDTAEM CCCCCCCCHHHHHHHCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH YGNGRSEQLISQAIGRTQPPYVVSKVLPSNASARGIARACEASLQRLGVRTLDLYLLHWR HCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEC GGSDLAEVVDAFEALRDAGKIRDWGVSNFDVDDMEELWAIDGGPHCLVNQVLYHAGSRGI CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC EFDLLPWCAAHEVAVMAYSPLGSRALLDHPVLHAIGQRRGVAATAVALAWAIRSGNVIAI EEECCCCHHHHHEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEE PESGTPAHVRANAAACTLQLHADDLAEIDRAFAPPTRKQPLDLL CCCCCCCEEECCCEEEEEEECHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SESSSPSCAQVRLRNGRRVPALGLGSWNLGQGRHAPEQEIQALQLGQQLGMQLIDTAEM CCCCCCCHHHHHHHCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH YGNGRSEQLISQAIGRTQPPYVVSKVLPSNASARGIARACEASLQRLGVRTLDLYLLHWR HCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEC GGSDLAEVVDAFEALRDAGKIRDWGVSNFDVDDMEELWAIDGGPHCLVNQVLYHAGSRGI CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC EFDLLPWCAAHEVAVMAYSPLGSRALLDHPVLHAIGQRRGVAATAVALAWAIRSGNVIAI EEECCCCHHHHHEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEE PESGTPAHVRANAAACTLQLHADDLAEIDRAFAPPTRKQPLDLL CCCCCCCEEECCCEEEEEEECHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]