| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is katE [H]
Identifier: 21241965
GI number: 21241965
Start: 1384285
End: 1386396
Strand: Reverse
Name: katE [H]
Synonym: XAC1211
Alternate gene names: 21241965
Gene position: 1386396-1384285 (Counterclockwise)
Preceding gene: 21241966
Following gene: 21241964
Centisome position: 26.79
GC content: 62.45
Gene sequence:
>2112_bases ATGGCCAAGTCCCCCAGTAAATCCGCGCAGGTTCCCGCCGTCTCACCTGCTGCAAGCGCCACGCCCGATGTGTCGCGCGG TACTGGCGATGAGTTGCACCAGAAGGCCGGCGGTACGCATCCGCAACTGACTACCAACCAGGGCATTCCGGTTGGCGACA ACCAGAATTCGCTGCGCGCAACGCCGCGTGGCCCGACGTTGCTGGAAGATTTCATCCTGCGGGAAAAGATCACCCACTTC GATCATGAGCGCATCCCCGAGCGCATCGTGCATGCGCGCGGCAGTGCCGCGCACGGCTATTTCGAGCTGACCAAGTCGCT GAGCCAGTACACCACCGCCAAGATCTTTACCGAGGTTGGCGAAAAAACCCCGTTATTCACCCGTTTTTCCACTGTCGCAG GCGGCGCCGGCTCGGTGGATACGCCGCGCGATGTGCGCGGGTTCGCGGTGAAGTTCTACACCAAGGAAGGCAACTGGGAT CTGGTCGGCAACAACATCCCGGTGTTCTTCATCCAGGATGCGATGAAGTTCCCGGACCTGATTCATGCGGTGAAGATGGA GCCGGATCGCGGTTTCCCGCAGGCCGCCAGTGCGCATGACACGTTCTGGGATTTCATCTCGCTGACGCCCGAATCGATGC ACATGATCATGTGGGCGATGAGCGACCGCACCATTCCGCGTTCGCTGCGCACGATCGAAGGGTTCGGTATTCATAGCTTC CGTTTCCTCAATGAGAAAGGCGAGAGCACCTTCGTCAAATTCCATTGGCGTCCCAAGCTAGGCCTGCAATCGACCATCTG GGACGAGGCGGTCAAGATCGCCGGTGCCGATCAAGACTTTCACCGTCGCGATCTGTTCGAAGCGATCCAGAGAGGCGACT TTCCGGAGTGGGAACTGGGCGTGCAGCTGTTCACCGAAGCGCAGGCAGAAACCTTCCCCTTCGATCATCTCGACTCGACC AAGGTCATTCCGGAAGAGTTGATACCGTTGCAGATCGTCGGCCGCATGGTGCTCGACCGCTGGCCGGACAATTTCTTCGC CGAAACCGAACAGGTTGCCTACTGCCCGGCCAATATCGTGCCCGGCATCGACTTCAGCAACGACCCGCTGCTGCAAGGTC GGTTGTTCTCGTATCTGGACACGCAACTGAGCCGCCTGGGCGGGCCCAATTTCCACCAGATTCCGATCAATGCACCCAAG TGCCCGTTCGCCAACAACCAGCGCGACGGCCACATGCAGATGGGTGTGCCGAAGGGCCGCGTCGCTTATGAGCCCAGCTC GCTGCAGGCCGATGCGCCGCGCGAAGCGCTGCGTGGCTTCCCCAGCCACGCAACCCCGGCCGAAGAAGGCGCCAAGGGCC GTGTGCGTGCAGAGAGCTTTGCCGATCATTACAGCCAGGCGCGCCTGTTCTTCCGTAGCCAGACCGCACCGGAACAGGCG CACATCGCCTCGGCATTGGTGTTCGAACTGTCGAAGGTGGAAACCGCCCATGTGCGCGAGGCCATCGTGGGTCATTTACG CCATATCGACCAGGAGCTGGCGCAACGTGTGGCCGATGGCATGGGCATGACCGCCCTGCCGCCAGCACCGCCGGCTGCCG TGGCGCCGATCGACATGCCGCTCTCGCCTGCCTTGCAGGTCATCGGCAAGATGAAGGACACCTTGAAAGGGCGCACGGTG GGCATCCTGATTCACGACGGCTCGGACGCAGCGGCGATCAAGGCCGTACGCAAGGCGGCCGAAGCTGCGGGCGCGACGGT CAAGATCGTTGCGCCCAAGCTCGGCGGCGCCAAGCTCAACGACGGCAAGCAGTTGGCCGCCGACGGGCAGCTGGCGGGGA CGCCCTCGGTGGTGTTCGACGCGGTGGCGGTGCTGCTGTCCTCGGAAGCGGCCAAGCTGCTGACACGCGAATCGGCGGCG CTGGATTTCGTGAGTTTTGCCTGGGCGCATCTGAAGGCCATCGCGTTCGACGAAGGTGCGCAGTTGTTGTTGAAGGCCGG CAACGTCGGCAAGGATGCGGGCGTCGTTCCCGCCGCCGATACCAAGGCATTCATTGCCGCAGCAAAAACCCGCCAGTGGG CACGCGAGCCGAAGGTGCGCATGCTGGCGTAG
Upstream 100 bases:
>100_bases TGTGAGTATTCGTTCGCATACAGACACATGCAATTAACAGCGCCACTCCCAGGCTTTATTGATCAGCCCGCATCCCAAGC CCGCCTACAGTGGAGTCCCC
Downstream 100 bases:
>100_bases CCGCCCTAGGGAAGGCCCGATCACCCGGTTGAAAACCGAGGGGAGCCACATCCGCGCTGGCGGCACCACGCAACCCGGTT TTCGCCGCTACCGCGCGTTT
Product: catalase
Products: NA
Alternate protein names: KAT2 [H]
Number of amino acids: Translated: 703; Mature: 702
Protein sequence:
>703_residues MAKSPSKSAQVPAVSPAASATPDVSRGTGDELHQKAGGTHPQLTTNQGIPVGDNQNSLRATPRGPTLLEDFILREKITHF DHERIPERIVHARGSAAHGYFELTKSLSQYTTAKIFTEVGEKTPLFTRFSTVAGGAGSVDTPRDVRGFAVKFYTKEGNWD LVGNNIPVFFIQDAMKFPDLIHAVKMEPDRGFPQAASAHDTFWDFISLTPESMHMIMWAMSDRTIPRSLRTIEGFGIHSF RFLNEKGESTFVKFHWRPKLGLQSTIWDEAVKIAGADQDFHRRDLFEAIQRGDFPEWELGVQLFTEAQAETFPFDHLDST KVIPEELIPLQIVGRMVLDRWPDNFFAETEQVAYCPANIVPGIDFSNDPLLQGRLFSYLDTQLSRLGGPNFHQIPINAPK CPFANNQRDGHMQMGVPKGRVAYEPSSLQADAPREALRGFPSHATPAEEGAKGRVRAESFADHYSQARLFFRSQTAPEQA HIASALVFELSKVETAHVREAIVGHLRHIDQELAQRVADGMGMTALPPAPPAAVAPIDMPLSPALQVIGKMKDTLKGRTV GILIHDGSDAAAIKAVRKAAEAAGATVKIVAPKLGGAKLNDGKQLAADGQLAGTPSVVFDAVAVLLSSEAAKLLTRESAA LDFVSFAWAHLKAIAFDEGAQLLLKAGNVGKDAGVVPAADTKAFIAAAKTRQWAREPKVRMLA
Sequences:
>Translated_703_residues MAKSPSKSAQVPAVSPAASATPDVSRGTGDELHQKAGGTHPQLTTNQGIPVGDNQNSLRATPRGPTLLEDFILREKITHF DHERIPERIVHARGSAAHGYFELTKSLSQYTTAKIFTEVGEKTPLFTRFSTVAGGAGSVDTPRDVRGFAVKFYTKEGNWD LVGNNIPVFFIQDAMKFPDLIHAVKMEPDRGFPQAASAHDTFWDFISLTPESMHMIMWAMSDRTIPRSLRTIEGFGIHSF RFLNEKGESTFVKFHWRPKLGLQSTIWDEAVKIAGADQDFHRRDLFEAIQRGDFPEWELGVQLFTEAQAETFPFDHLDST KVIPEELIPLQIVGRMVLDRWPDNFFAETEQVAYCPANIVPGIDFSNDPLLQGRLFSYLDTQLSRLGGPNFHQIPINAPK CPFANNQRDGHMQMGVPKGRVAYEPSSLQADAPREALRGFPSHATPAEEGAKGRVRAESFADHYSQARLFFRSQTAPEQA HIASALVFELSKVETAHVREAIVGHLRHIDQELAQRVADGMGMTALPPAPPAAVAPIDMPLSPALQVIGKMKDTLKGRTV GILIHDGSDAAAIKAVRKAAEAAGATVKIVAPKLGGAKLNDGKQLAADGQLAGTPSVVFDAVAVLLSSEAAKLLTRESAA LDFVSFAWAHLKAIAFDEGAQLLLKAGNVGKDAGVVPAADTKAFIAAAKTRQWAREPKVRMLA >Mature_702_residues AKSPSKSAQVPAVSPAASATPDVSRGTGDELHQKAGGTHPQLTTNQGIPVGDNQNSLRATPRGPTLLEDFILREKITHFD HERIPERIVHARGSAAHGYFELTKSLSQYTTAKIFTEVGEKTPLFTRFSTVAGGAGSVDTPRDVRGFAVKFYTKEGNWDL VGNNIPVFFIQDAMKFPDLIHAVKMEPDRGFPQAASAHDTFWDFISLTPESMHMIMWAMSDRTIPRSLRTIEGFGIHSFR FLNEKGESTFVKFHWRPKLGLQSTIWDEAVKIAGADQDFHRRDLFEAIQRGDFPEWELGVQLFTEAQAETFPFDHLDSTK VIPEELIPLQIVGRMVLDRWPDNFFAETEQVAYCPANIVPGIDFSNDPLLQGRLFSYLDTQLSRLGGPNFHQIPINAPKC PFANNQRDGHMQMGVPKGRVAYEPSSLQADAPREALRGFPSHATPAEEGAKGRVRAESFADHYSQARLFFRSQTAPEQAH IASALVFELSKVETAHVREAIVGHLRHIDQELAQRVADGMGMTALPPAPPAAVAPIDMPLSPALQVIGKMKDTLKGRTVG ILIHDGSDAAAIKAVRKAAEAAGATVKIVAPKLGGAKLNDGKQLAADGQLAGTPSVVFDAVAVLLSSEAAKLLTRESAAL DFVSFAWAHLKAIAFDEGAQLLLKAGNVGKDAGVVPAADTKAFIAAAKTRQWAREPKVRMLA
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide. Could protect cells in nodules which have a high potential to produce hydrogen peroxide because of the strong reducing conditions requ
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family. HPII subfamily [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=481, Percent_Identity=43.6590436590437, Blast_Score=389, Evalue=1e-108, Organism=Escherichia coli, GI48994891, Length=704, Percent_Identity=51.2784090909091, Blast_Score=681, Evalue=0.0, Organism=Caenorhabditis elegans, GI25151141, Length=493, Percent_Identity=43.8133874239351, Blast_Score=384, Evalue=1e-107, Organism=Caenorhabditis elegans, GI71998444, Length=441, Percent_Identity=45.578231292517, Blast_Score=384, Evalue=1e-107, Organism=Caenorhabditis elegans, GI25147792, Length=500, Percent_Identity=43.4, Blast_Score=384, Evalue=1e-107, Organism=Saccharomyces cerevisiae, GI6320462, Length=397, Percent_Identity=43.3249370277078, Blast_Score=328, Evalue=2e-90, Organism=Saccharomyces cerevisiae, GI6321525, Length=376, Percent_Identity=42.5531914893617, Blast_Score=296, Evalue=6e-81, Organism=Drosophila melanogaster, GI17981717, Length=476, Percent_Identity=42.2268907563025, Blast_Score=372, Evalue=1e-103, Organism=Drosophila melanogaster, GI19920968, Length=436, Percent_Identity=40.5963302752294, Blast_Score=345, Evalue=7e-95,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 76613; Mature: 76482
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: PS00437 CATALASE_1 ; PS00438 CATALASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSPSKSAQVPAVSPAASATPDVSRGTGDELHQKAGGTHPQLTTNQGIPVGDNQNSLRA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEECCCCCCCCCCCCCCCC TPRGPTLLEDFILREKITHFDHERIPERIVHARGSAAHGYFELTKSLSQYTTAKIFTEVG CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHC EKTPLFTRFSTVAGGAGSVDTPRDVRGFAVKFYTKEGNWDLVGNNIPVFFIQDAMKFPDL CCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCEEEECCCCCEEEECCHHHHHHH IHAVKMEPDRGFPQAASAHDTFWDFISLTPESMHMIMWAMSDRTIPRSLRTIEGFGIHSF HHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHEEEEHHHCCCCCHHHHHHHCCCCCCCE RFLNEKGESTFVKFHWRPKLGLQSTIWDEAVKIAGADQDFHRRDLFEAIQRGDFPEWELG EEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHH VQLFTEAQAETFPFDHLDSTKVIPEELIPLQIVGRMVLDRWPDNFFAETEQVAYCPANIV HHHHHHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHCCCHHHHCCCCEEECCCCCC PGIDFSNDPLLQGRLFSYLDTQLSRLGGPNFHQIPINAPKCPFANNQRDGHMQMGVPKGR CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCEEECCCCCC VAYEPSSLQADAPREALRGFPSHATPAEEGAKGRVRAESFADHYSQARLFFRSQTAPEQA EEECCCCCCCCCCHHHHCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH HIASALVFELSKVETAHVREAIVGHLRHIDQELAQRVADGMGMTALPPAPPAAVAPIDMP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC LSPALQVIGKMKDTLKGRTVGILIHDGSDAAAIKAVRKAAEAAGATVKIVAPKLGGAKLN HHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC DGKQLAADGQLAGTPSVVFDAVAVLLSSEAAKLLTRESAALDFVSFAWAHLKAIAFDEGA CCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC QLLLKAGNVGKDAGVVPAADTKAFIAAAKTRQWAREPKVRMLA EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECC >Mature Secondary Structure AKSPSKSAQVPAVSPAASATPDVSRGTGDELHQKAGGTHPQLTTNQGIPVGDNQNSLRA CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEECCCCCCCCCCCCCCCC TPRGPTLLEDFILREKITHFDHERIPERIVHARGSAAHGYFELTKSLSQYTTAKIFTEVG CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHC EKTPLFTRFSTVAGGAGSVDTPRDVRGFAVKFYTKEGNWDLVGNNIPVFFIQDAMKFPDL CCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCEEEECCCCCEEEECCHHHHHHH IHAVKMEPDRGFPQAASAHDTFWDFISLTPESMHMIMWAMSDRTIPRSLRTIEGFGIHSF HHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHEEEEHHHCCCCCHHHHHHHCCCCCCCE RFLNEKGESTFVKFHWRPKLGLQSTIWDEAVKIAGADQDFHRRDLFEAIQRGDFPEWELG EEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHH VQLFTEAQAETFPFDHLDSTKVIPEELIPLQIVGRMVLDRWPDNFFAETEQVAYCPANIV HHHHHHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHCCCHHHHCCCCEEECCCCCC PGIDFSNDPLLQGRLFSYLDTQLSRLGGPNFHQIPINAPKCPFANNQRDGHMQMGVPKGR CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCEEECCCCCC VAYEPSSLQADAPREALRGFPSHATPAEEGAKGRVRAESFADHYSQARLFFRSQTAPEQA EEECCCCCCCCCCHHHHCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH HIASALVFELSKVETAHVREAIVGHLRHIDQELAQRVADGMGMTALPPAPPAAVAPIDMP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC LSPALQVIGKMKDTLKGRTVGILIHDGSDAAAIKAVRKAAEAAGATVKIVAPKLGGAKLN HHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC DGKQLAADGQLAGTPSVVFDAVAVLLSSEAAKLLTRESAALDFVSFAWAHLKAIAFDEGA CCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC QLLLKAGNVGKDAGVVPAADTKAFIAAAKTRQWAREPKVRMLA EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10198032; 11481431 [H]