| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21241957
Identifier: 21241957
GI number: 21241957
Start: 1374509
End: 1375444
Strand: Direct
Name: 21241957
Synonym: XAC1203
Alternate gene names: NA
Gene position: 1374509-1375444 (Clockwise)
Preceding gene: 21241956
Following gene: 77748567
Centisome position: 26.56
GC content: 64.42
Gene sequence:
>936_bases ATGCCGCGCGTCGTAACGCTTTACTCATCCCACTCTTCAACGCTGCACGGTCATGCGATCCGTGCCGCGCTTTGCCCTGG AATCACCGCAATGCCCACCATCACCTCGCGCTCGTCCACCCGCAAGACACCCGCATCGCTGCTCGCCGTCATCGTGACTG TAGCGCTGAGCAGCCTCGCAGTTCAGGCGCAGGCGCAAGACGCCACCGAAGCGGCGCTTTGCACCGATCGGCCGACCAAG GCCAATGCCACCTGCACCGTGCCGGCTGGCGCCTGGCAGCTGGAAACCGACATCGGCAATGACACGCGCGACAGCCAGCC CGGCACACGCACAGAAACAGCGTACTTCACCAATCCCACGCTCAAGTACGGCGTCAGCGACCGCATCGATCTGCAACTCA ATTGGGCGCCGCAGCTGCAGGTCAAGACCACCGACCGCGCCACCGGCGCGCGCAGCAGCCTGAGCGGCGGCGGCGATCTC TATCTGCGCATGAAGGCGCGTGTGTACGAGAGCGGCACCGCCAGCGTGGCGCTGCTGCCGTTCGTCAAGGCACCCACCGC GCGCACCGGATTGGGCAACGACGAATGGGAGGGCGGCGTCGCATTGCCGATCAATTTTGCGCTGCCCAACAGCTTCTCGC TGACGTTCGGTCCGGAACTGGATTGGTTGGCCGACAGCGATGGCAGCGGCAAGCATGTCGCCATCGTCAACGTGATCAAT CTGGCGCGCCCGCTGACACCGAAGGTGTCGATGGCGGTTGAGCTGTGGTCCTCGATCAACCGCGACCCTGCACGGACCGT CGAGCAGTACTCGGCCGATATTGCGGCGACGTATCTGCTCAACCCGCTATTGCAGCTGGACGTGGGTGCGAATTTCGGCC TCAACGACCGCACGCCCGACAGGCAGGTCTACGTAGGCCTGTCGCACCGCTTCTAG
Upstream 100 bases:
>100_bases CGCACTTCTCGGCAGCAGGCGTATGCATCGCATCGTGACCGCACTGACGCCGCCCTGAAAAAAACCAGTTGCGGCGCCGC CGACCAAGCGCAGCGCCGCC
Downstream 100 bases:
>100_bases GAGCAGCTCACAAAACGACTGCGTAGCCGCCAGGCGGGCGCGGCCGGTGCTCGGAATCGGCATGTGCCACGCGTACGCCG CGGTTCCTGTGCGCCGTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MPRVVTLYSSHSSTLHGHAIRAALCPGITAMPTITSRSSTRKTPASLLAVIVTVALSSLAVQAQAQDATEAALCTDRPTK ANATCTVPAGAWQLETDIGNDTRDSQPGTRTETAYFTNPTLKYGVSDRIDLQLNWAPQLQVKTTDRATGARSSLSGGGDL YLRMKARVYESGTASVALLPFVKAPTARTGLGNDEWEGGVALPINFALPNSFSLTFGPELDWLADSDGSGKHVAIVNVIN LARPLTPKVSMAVELWSSINRDPARTVEQYSADIAATYLLNPLLQLDVGANFGLNDRTPDRQVYVGLSHRF
Sequences:
>Translated_311_residues MPRVVTLYSSHSSTLHGHAIRAALCPGITAMPTITSRSSTRKTPASLLAVIVTVALSSLAVQAQAQDATEAALCTDRPTK ANATCTVPAGAWQLETDIGNDTRDSQPGTRTETAYFTNPTLKYGVSDRIDLQLNWAPQLQVKTTDRATGARSSLSGGGDL YLRMKARVYESGTASVALLPFVKAPTARTGLGNDEWEGGVALPINFALPNSFSLTFGPELDWLADSDGSGKHVAIVNVIN LARPLTPKVSMAVELWSSINRDPARTVEQYSADIAATYLLNPLLQLDVGANFGLNDRTPDRQVYVGLSHRF >Mature_310_residues PRVVTLYSSHSSTLHGHAIRAALCPGITAMPTITSRSSTRKTPASLLAVIVTVALSSLAVQAQAQDATEAALCTDRPTKA NATCTVPAGAWQLETDIGNDTRDSQPGTRTETAYFTNPTLKYGVSDRIDLQLNWAPQLQVKTTDRATGARSSLSGGGDLY LRMKARVYESGTASVALLPFVKAPTARTGLGNDEWEGGVALPINFALPNSFSLTFGPELDWLADSDGSGKHVAIVNVINL ARPLTPKVSMAVELWSSINRDPARTVEQYSADIAATYLLNPLLQLDVGANFGLNDRTPDRQVYVGLSHRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33269; Mature: 33138
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRVVTLYSSHSSTLHGHAIRAALCPGITAMPTITSRSSTRKTPASLLAVIVTVALSSLA CCEEEEEECCCCCCCCHHHHHHHHCCCCEECCEECCCCCCCCCHHHHHHHHHHHHHHHHH VQAQAQDATEAALCTDRPTKANATCTVPAGAWQLETDIGNDTRDSQPGTRTETAYFTNPT EEHHCCCCCHHHHCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCEEEEECCE LKYGVSDRIDLQLNWAPQLQVKTTDRATGARSSLSGGGDLYLRMKARVYESGTASVALLP EEECCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEE FVKAPTARTGLGNDEWEGGVALPINFALPNSFSLTFGPELDWLADSDGSGKHVAIVNVIN EECCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCEEECCCCCCCEEEEEEEEH LARPLTPKVSMAVELWSSINRDPARTVEQYSADIAATYLLNPLLQLDVGANFGLNDRTPD HCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCC RQVYVGLSHRF CEEEEEECCCC >Mature Secondary Structure PRVVTLYSSHSSTLHGHAIRAALCPGITAMPTITSRSSTRKTPASLLAVIVTVALSSLA CEEEEEECCCCCCCCHHHHHHHHCCCCEECCEECCCCCCCCCHHHHHHHHHHHHHHHHH VQAQAQDATEAALCTDRPTKANATCTVPAGAWQLETDIGNDTRDSQPGTRTETAYFTNPT EEHHCCCCCHHHHCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCEEEEECCE LKYGVSDRIDLQLNWAPQLQVKTTDRATGARSSLSGGGDLYLRMKARVYESGTASVALLP EEECCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEE FVKAPTARTGLGNDEWEGGVALPINFALPNSFSLTFGPELDWLADSDGSGKHVAIVNVIN EECCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCEEECCCCCCCEEEEEEEEH LARPLTPKVSMAVELWSSINRDPARTVEQYSADIAATYLLNPLLQLDVGANFGLNDRTPD HCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCC RQVYVGLSHRF CEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA