Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

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The map label for this gene is yuxL [H]

Identifier: 77748567

GI number: 77748567

Start: 1375738

End: 1377858

Strand: Direct

Name: yuxL [H]

Synonym: XAC1204

Alternate gene names: 77748567

Gene position: 1375738-1377858 (Clockwise)

Preceding gene: 21241957

Following gene: 77748568

Centisome position: 26.58

GC content: 64.78

Gene sequence:

>2121_bases
ATGAAGCTGCGTCACGCCGTATTGCCCCTGTGTCTGCTGGCTGCCCTGCCAAGCCTTGCCGCCGCGCGCGGTTTCGATGT
GCGCGACATGGTGGCGCTGGACCGGGTGTCCTCGCCCACGCTCACGCCCGATGGCAGCAGCGTGCTGTTCGCCAAGCGCC
AGGCCAAGACCGCCAATGGCAAGCCGGCCACCAGCCTGTGGGTGCGCAATCTGCGCACCCGCGATTTGTCGCCGCCCAAG
CGGCTCACCCCGGAAGGATGGAACGTCAACAGCCCGGCGTTGTCGCCGGACGGCAAGACGGTGTACTTCCTCAGCAGCAA
ATCCGGTAGCCAGCAGCTCTACGCGCAGCCGATGGCCGGCGGCACCCCGCAGCAACTCACCGCATTTGCAGTAGACGTGG
ACAGCTACAAGCTCTCGCCGGGCGGCAAGCGCATCGCCTTCAGCGCGGGCGTGTTCCAGGACTGCGGCTCTGACCTGGGC
TGCACCAAGAAGAAGCTGGGCGAGCGCAAGAATAACAAGGCCAGCGGCGTGATCTACGACCAGTTGTTCGTGCGTCATTG
GGACACCTGGAACGATGGCCGCCGCAATACCTTGTTCGTCGCCGAGTTGCCTGCGGCCGGTGCCAAGGCAGTGGTCGGGG
CGTCGGCGATCAGCGCCACGTTGGCCGGCGACGCGCCGTCCAAGCCGTTCGGTGGCAACGACGATTACACCTGGTCGCCG
GATGGCAGCAGCGTGGTGGCCAGCGTGCGCATTCCGCAGCCGCATGGCCCGGAAGCAGGCAAGAACGCCAAGGCCAGCGG
CAAGCCCACCGGTAACGACGAGCCGTGGCAGACCAACTTCGATCTGTACCGCCTGGATGCGACCGGCAAGTCCGCGCCGG
TCAACCTGACCGCGGCCAACCCGGCCTGGGATGCCGGCCCGGTGTTCAGTACCGACGGCAAGACCCTGTACTACCGCGCC
ATGAAGCGCCCGGGTTTCGAGGCCGACCGCTTCGGCCTGATGGCGATGGATGTGGCCAGCGGCAAGACCCGCGAGATCGC
GCCGAAGTGGGACCGCTCGGCCGGCGAAATCGTGCTGAGCGACGACGGCAGCAGCCTGTACACCAGTGCCGACGATCTCG
GCGAGCATCCGCTGTTCAAGATCGATATCGCCAGCGGCGAGGCCGCCAAGCTGGTGGGCGAGGGCAGCGTGCACGCCCCG
ACGCTGGCCGGCAATACGCTGGCGTTTACGCGCAGCTCGCTCAAGAGTGGCGACCAGGTCTTCGTCAGCGACACGCAAGG
CCAGGGCCTGCGTGCGATCAGCCAGAGCGCCGGCGAACTGCTGCCAGAGGTGCAGTTCGGCGACTACGAACAGTTCCAGT
TCAAGGGCTGGAACAACGACACCGTGCATGGCTACGTGGTCAAGCCGTACAACTACCAGGAAGGCAAGACGTACCCGGTG
GCGTTCCTCATCCACGGCGGCCCGCAGGGCAGCTTTGGCAATGGCTGGAGCAACCGTTGGAATCCGCAGACCTACGCCGG
CCAGGGCTACGCGGTGGTCATGATCGACTTCCACGGCTCTACCGGCTACGGCCAGGAATTCACCGACGCCATCAGCCAGC
ATTGGGGCGACCGCCCGCTGGAGGATCTGCAAAAAGGCTGGGCCGCCGCGCAGAAGCAATACGGCTTCCTCAACGGCGAC
AAGGCCTGCGCATTGGGCGCCAGCTATGGCGGCTACATGGTCTATTGGATGGCCGGCAACTGGAATCAACCATGGAAGTG
CCTGGTCGACCACGACGGCGTGTTCGACAACCGCACCATGGGCTACGCCACCGAGGAATTGTGGTTCAGCGAGTGGGAAA
ACGGCGGCACGCCGTGGCAGAACCCGGCCGGCTACGAGAAGTTCAACCCGGTGCTGCACGTAGACAACTGGAAGGTGCCG
ATGCTGGTCATCCACGGTCAGCAGGATTTCCGCATTCCGGTCGAACAAGGCCTGGCCGCCTTCACCGCGCTGCAGCGCAA
GGGCATCGATTCCAAGTTCCTGTATTTCCCGGACGAGAACCACTGGGTGCTCAAGCCGGATAACAGCGTCTTGTGGCATG
ACACCGTCAACAGCTGGCTGAAGCAGCATATCGGTCAGTGA

Upstream 100 bases:

>100_bases
CGCGCGCGGCGCACCACGTCGTGCACGCATGACCTCCTGCCTTTGCGCGTGCGCCGCAGCAACGCCTACCATCGACGTTT
TGCCGTTGCCGGAGAGCTCG

Downstream 100 bases:

>100_bases
CGGACGACCGACACGCCGCCAGGCGCGGCGTGTCGGTTGCTTGAGCGAATGCGTTCTCTGGGCGATGGGCGCTGTCGACG
TCACCGTTTCGGCAAGCGAA

Product: alanyl dipeptidyl peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 706; Mature: 706

Protein sequence:

>706_residues
MKLRHAVLPLCLLAALPSLAAARGFDVRDMVALDRVSSPTLTPDGSSVLFAKRQAKTANGKPATSLWVRNLRTRDLSPPK
RLTPEGWNVNSPALSPDGKTVYFLSSKSGSQQLYAQPMAGGTPQQLTAFAVDVDSYKLSPGGKRIAFSAGVFQDCGSDLG
CTKKKLGERKNNKASGVIYDQLFVRHWDTWNDGRRNTLFVAELPAAGAKAVVGASAISATLAGDAPSKPFGGNDDYTWSP
DGSSVVASVRIPQPHGPEAGKNAKASGKPTGNDEPWQTNFDLYRLDATGKSAPVNLTAANPAWDAGPVFSTDGKTLYYRA
MKRPGFEADRFGLMAMDVASGKTREIAPKWDRSAGEIVLSDDGSSLYTSADDLGEHPLFKIDIASGEAAKLVGEGSVHAP
TLAGNTLAFTRSSLKSGDQVFVSDTQGQGLRAISQSAGELLPEVQFGDYEQFQFKGWNNDTVHGYVVKPYNYQEGKTYPV
AFLIHGGPQGSFGNGWSNRWNPQTYAGQGYAVVMIDFHGSTGYGQEFTDAISQHWGDRPLEDLQKGWAAAQKQYGFLNGD
KACALGASYGGYMVYWMAGNWNQPWKCLVDHDGVFDNRTMGYATEELWFSEWENGGTPWQNPAGYEKFNPVLHVDNWKVP
MLVIHGQQDFRIPVEQGLAAFTALQRKGIDSKFLYFPDENHWVLKPDNSVLWHDTVNSWLKQHIGQ

Sequences:

>Translated_706_residues
MKLRHAVLPLCLLAALPSLAAARGFDVRDMVALDRVSSPTLTPDGSSVLFAKRQAKTANGKPATSLWVRNLRTRDLSPPK
RLTPEGWNVNSPALSPDGKTVYFLSSKSGSQQLYAQPMAGGTPQQLTAFAVDVDSYKLSPGGKRIAFSAGVFQDCGSDLG
CTKKKLGERKNNKASGVIYDQLFVRHWDTWNDGRRNTLFVAELPAAGAKAVVGASAISATLAGDAPSKPFGGNDDYTWSP
DGSSVVASVRIPQPHGPEAGKNAKASGKPTGNDEPWQTNFDLYRLDATGKSAPVNLTAANPAWDAGPVFSTDGKTLYYRA
MKRPGFEADRFGLMAMDVASGKTREIAPKWDRSAGEIVLSDDGSSLYTSADDLGEHPLFKIDIASGEAAKLVGEGSVHAP
TLAGNTLAFTRSSLKSGDQVFVSDTQGQGLRAISQSAGELLPEVQFGDYEQFQFKGWNNDTVHGYVVKPYNYQEGKTYPV
AFLIHGGPQGSFGNGWSNRWNPQTYAGQGYAVVMIDFHGSTGYGQEFTDAISQHWGDRPLEDLQKGWAAAQKQYGFLNGD
KACALGASYGGYMVYWMAGNWNQPWKCLVDHDGVFDNRTMGYATEELWFSEWENGGTPWQNPAGYEKFNPVLHVDNWKVP
MLVIHGQQDFRIPVEQGLAAFTALQRKGIDSKFLYFPDENHWVLKPDNSVLWHDTVNSWLKQHIGQ
>Mature_706_residues
MKLRHAVLPLCLLAALPSLAAARGFDVRDMVALDRVSSPTLTPDGSSVLFAKRQAKTANGKPATSLWVRNLRTRDLSPPK
RLTPEGWNVNSPALSPDGKTVYFLSSKSGSQQLYAQPMAGGTPQQLTAFAVDVDSYKLSPGGKRIAFSAGVFQDCGSDLG
CTKKKLGERKNNKASGVIYDQLFVRHWDTWNDGRRNTLFVAELPAAGAKAVVGASAISATLAGDAPSKPFGGNDDYTWSP
DGSSVVASVRIPQPHGPEAGKNAKASGKPTGNDEPWQTNFDLYRLDATGKSAPVNLTAANPAWDAGPVFSTDGKTLYYRA
MKRPGFEADRFGLMAMDVASGKTREIAPKWDRSAGEIVLSDDGSSLYTSADDLGEHPLFKIDIASGEAAKLVGEGSVHAP
TLAGNTLAFTRSSLKSGDQVFVSDTQGQGLRAISQSAGELLPEVQFGDYEQFQFKGWNNDTVHGYVVKPYNYQEGKTYPV
AFLIHGGPQGSFGNGWSNRWNPQTYAGQGYAVVMIDFHGSTGYGQEFTDAISQHWGDRPLEDLQKGWAAAQKQYGFLNGD
KACALGASYGGYMVYWMAGNWNQPWKCLVDHDGVFDNRTMGYATEELWFSEWENGGTPWQNPAGYEKFNPVLHVDNWKVP
MLVIHGQQDFRIPVEQGLAAFTALQRKGIDSKFLYFPDENHWVLKPDNSVLWHDTVNSWLKQHIGQ

Specific function: Unknown

COG id: COG1506

COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S9B family [H]

Homologues:

Organism=Homo sapiens, GI23510451, Length=296, Percent_Identity=21.6216216216216, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI194394146, Length=382, Percent_Identity=25.6544502617801, Blast_Score=95, Evalue=3e-19,
Organism=Homo sapiens, GI18450280, Length=268, Percent_Identity=25.7462686567164, Blast_Score=84, Evalue=5e-16,
Organism=Homo sapiens, GI37577089, Length=268, Percent_Identity=25.7462686567164, Blast_Score=84, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI25149159, Length=254, Percent_Identity=26.7716535433071, Blast_Score=97, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI25144537, Length=235, Percent_Identity=28.0851063829787, Blast_Score=96, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI25144540, Length=235, Percent_Identity=28.0851063829787, Blast_Score=95, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17552908, Length=205, Percent_Identity=27.8048780487805, Blast_Score=92, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17508017, Length=260, Percent_Identity=23.8461538461538, Blast_Score=77, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17508019, Length=260, Percent_Identity=23.8461538461538, Blast_Score=77, Evalue=5e-14,
Organism=Drosophila melanogaster, GI45551969, Length=237, Percent_Identity=26.1603375527426, Blast_Score=76, Evalue=7e-14,
Organism=Drosophila melanogaster, GI45550825, Length=237, Percent_Identity=26.1603375527426, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI45553511, Length=237, Percent_Identity=26.1603375527426, Blast_Score=75, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR011659
- InterPro:   IPR001375 [H]

Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 76990; Mature: 76990

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRHAVLPLCLLAALPSLAAARGFDVRDMVALDRVSSPTLTPDGSSVLFAKRQAKTANG
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCC
KPATSLWVRNLRTRDLSPPKRLTPEGWNVNSPALSPDGKTVYFLSSKSGSQQLYAQPMAG
CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCC
GTPQQLTAFAVDVDSYKLSPGGKRIAFSAGVFQDCGSDLGCTKKKLGERKNNKASGVIYD
CCHHHEEEEEEEECCEEECCCCCEEEEECCCHHHCCCCCCCCHHHHCCCCCCCCCCEEHH
QLFVRHWDTWNDGRRNTLFVAELPAAGAKAVVGASAISATLAGDAPSKPFGGNDDYTWSP
HHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCCEEECC
DGSSVVASVRIPQPHGPEAGKNAKASGKPTGNDEPWQTNFDLYRLDATGKSAPVNLTAAN
CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECC
PAWDAGPVFSTDGKTLYYRAMKRPGFEADRFGLMAMDVASGKTREIAPKWDRSAGEIVLS
CCCCCCCEEECCCCEEEEEECCCCCCCCHHCCEEEEEECCCCCCCCCCCCCCCCCEEEEE
DDGSSLYTSADDLGEHPLFKIDIASGEAAKLVGEGSVHAPTLAGNTLAFTRSSLKSGDQV
CCCCEEEECHHHHCCCCEEEEEECCCCEEEEEECCCCCCCEECCCEEEEEHHHHCCCCEE
FVSDTQGQGLRAISQSAGELLPEVQFGDYEQFQFKGWNNDTVHGYVVKPYNYQEGKTYPV
EEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEECCEECCCCCEEEE
AFLIHGGPQGSFGNGWSNRWNPQTYAGQGYAVVMIDFHGSTGYGQEFTDAISQHWGDRPL
EEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCH
EDLQKGWAAAQKQYGFLNGDKACALGASYGGYMVYWMAGNWNQPWKCLVDHDGVFDNRTM
HHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCC
GYATEELWFSEWENGGTPWQNPAGYEKFNPVLHVDNWKVPMLVIHGQQDFRIPVEQGLAA
CCCHHHHHHHHHCCCCCCCCCCCCHHHCCCEEEECCCCEEEEEEECCCCCCCCHHHHHHH
FTALQRKGIDSKFLYFPDENHWVLKPDNSVLWHDTVNSWLKQHIGQ
HHHHHHCCCCCEEEEECCCCEEEECCCCCEEEHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLRHAVLPLCLLAALPSLAAARGFDVRDMVALDRVSSPTLTPDGSSVLFAKRQAKTANG
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCC
KPATSLWVRNLRTRDLSPPKRLTPEGWNVNSPALSPDGKTVYFLSSKSGSQQLYAQPMAG
CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCC
GTPQQLTAFAVDVDSYKLSPGGKRIAFSAGVFQDCGSDLGCTKKKLGERKNNKASGVIYD
CCHHHEEEEEEEECCEEECCCCCEEEEECCCHHHCCCCCCCCHHHHCCCCCCCCCCEEHH
QLFVRHWDTWNDGRRNTLFVAELPAAGAKAVVGASAISATLAGDAPSKPFGGNDDYTWSP
HHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCCEEECC
DGSSVVASVRIPQPHGPEAGKNAKASGKPTGNDEPWQTNFDLYRLDATGKSAPVNLTAAN
CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECC
PAWDAGPVFSTDGKTLYYRAMKRPGFEADRFGLMAMDVASGKTREIAPKWDRSAGEIVLS
CCCCCCCEEECCCCEEEEEECCCCCCCCHHCCEEEEEECCCCCCCCCCCCCCCCCEEEEE
DDGSSLYTSADDLGEHPLFKIDIASGEAAKLVGEGSVHAPTLAGNTLAFTRSSLKSGDQV
CCCCEEEECHHHHCCCCEEEEEECCCCEEEEEECCCCCCCEECCCEEEEEHHHHCCCCEE
FVSDTQGQGLRAISQSAGELLPEVQFGDYEQFQFKGWNNDTVHGYVVKPYNYQEGKTYPV
EEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEECCEECCCCCEEEE
AFLIHGGPQGSFGNGWSNRWNPQTYAGQGYAVVMIDFHGSTGYGQEFTDAISQHWGDRPL
EEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCH
EDLQKGWAAAQKQYGFLNGDKACALGASYGGYMVYWMAGNWNQPWKCLVDHDGVFDNRTM
HHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCC
GYATEELWFSEWENGGTPWQNPAGYEKFNPVLHVDNWKVPMLVIHGQQDFRIPVEQGLAA
CCCHHHHHHHHHCCCCCCCCCCCCHHHCCCEEEECCCCEEEEEEECCCCCCCCHHHHHHH
FTALQRKGIDSKFLYFPDENHWVLKPDNSVLWHDTVNSWLKQHIGQ
HHHHHHCCCCCEEEEECCCCEEEECCCCCEEEHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 3098560 [H]