| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241944
Identifier: 21241944
GI number: 21241944
Start: 1358431
End: 1359750
Strand: Direct
Name: 21241944
Synonym: XAC1190
Alternate gene names: NA
Gene position: 1358431-1359750 (Clockwise)
Preceding gene: 21241940
Following gene: 21241945
Centisome position: 26.25
GC content: 67.2
Gene sequence:
>1320_bases ATGAGCCGGCGTGGTGGCAGTGCGGATCTTCCCTTGCATGGAGGTCGCGTCCCGCGTTGGTTGGGTGAGCGGATGACGCG GCTTGGCGCAGTGATGTGCGAGGCGATCGTGCACAGCTATGGGCGCGATGAATTGTTGCGGCGGCTTGCGCACCCGTTCT GGTTTCAGTCGTTCGGTGCGGTCATGGGCATGGACTGGCATTCGTCCGGCATTACCACCAGCGTGATCGGCGCGCTCAAG CGTGGGTTGACGCCACTGGCCGGCGAACTGGGCATCCATGTCTGTGGCGGGCGCGGCCGGCATTCGCGTGCCACGCCTTC CGAATTGCTGGCAGTGGGCGATGCGGTCGGGCTGGACGGCGCCGCTTTGGCACAGGCCAGCCGCTTGGTCGCCAAGGTGG ACAGCGCTGCCGTGCAGGACGGCTTCGATCTGTACCTGCATGGTTTCATCGTCAGCGACGATGGCCGCTGGGTGGTGGTG CAGCAGGGCATGCACGGGCAGCGCAAGCAGGCGCGCCGGTATCACTGGCTCTCCGAAGGCCTGAGCAGTTTTGTGGATGC GCCGCATGCTGCCATCGAGGGTGCGCATCAAGGCAACATCGTCAATCTCGCCGACCACCGTGCCGCTGCCTCGCGCGATG CGCAGGTGGAGCTGTTGCGCAGCACAGCGCCGGACCGGCTGGCACGCCAATGGCAACGGATTGCGGGTGTGGAGGCGCCT GCGGCGCAAGGTCCGCTCACCGGCGATCTGTTCGCCGGCCACGCCTGGGACCCGGCACAACACCCGCATCTGTCCATGCC CGATCATCATGACGTGCGCAGCGAAAACGTGATTACACGACGACTGCACGCCAGCTTGGCCGCCGCTGCCGAAGCGGGAC CGCGCGATTTCACCGCGCTGCTGCAAGTGCCTGGTGTGGGTGCGCGCACGTTGCGCTCGCTGGCGATGGTGGCCGAGGTG ATGCACGGCACGCCATGCCGTTTCAGCGACCCGGCGCGCTTTTCGCTTGCGCATGGGGGCAAGGACCGGCAACCGTTCCC GGTGCCCACACGCGTGCTCGACCACACCATCGGCGTACTCAAGCAAGCGATGCAGCAGGCCAAGCTGGGCAACGACGAAC GCTTGCAGGCGATCGCGCGGCTGGACGCGCAGGCGCGTCGGCTCGAAGCCAGTGCGCAAGGGCCGACGGTGGACGACTAC ATCGCGCAGGAACGTCGCGATTCGCATCGCTATGGCGGGCGCAGCGTGTTCGGCTGGGAGCCGGCGCCGGAGGATGCGCA CGCGGTGCAGCCGGCCCAAGCGCATGCAGGTCGCCGATGA
Upstream 100 bases:
>100_bases CGCTGAATTCGTCAGCTTTCCGCGCGCGTCAGCGCGCTGGTGTCCCAGCTGTTGCGACGTGCCGCCGTTATCCTGACCGC ATGAAGAAGAGGCGGCAGCA
Downstream 100 bases:
>100_bases GCGTACGCGCACGTAGCAGCACGCCAGTGGCCATCGACGGACGTTGCTTCACCTATGTGTTCCCGTGCCAGTGGGAAGAC CATTGCAAGATCGGTTTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MSRRGGSADLPLHGGRVPRWLGERMTRLGAVMCEAIVHSYGRDELLRRLAHPFWFQSFGAVMGMDWHSSGITTSVIGALK RGLTPLAGELGIHVCGGRGRHSRATPSELLAVGDAVGLDGAALAQASRLVAKVDSAAVQDGFDLYLHGFIVSDDGRWVVV QQGMHGQRKQARRYHWLSEGLSSFVDAPHAAIEGAHQGNIVNLADHRAAASRDAQVELLRSTAPDRLARQWQRIAGVEAP AAQGPLTGDLFAGHAWDPAQHPHLSMPDHHDVRSENVITRRLHASLAAAAEAGPRDFTALLQVPGVGARTLRSLAMVAEV MHGTPCRFSDPARFSLAHGGKDRQPFPVPTRVLDHTIGVLKQAMQQAKLGNDERLQAIARLDAQARRLEASAQGPTVDDY IAQERRDSHRYGGRSVFGWEPAPEDAHAVQPAQAHAGRR
Sequences:
>Translated_439_residues MSRRGGSADLPLHGGRVPRWLGERMTRLGAVMCEAIVHSYGRDELLRRLAHPFWFQSFGAVMGMDWHSSGITTSVIGALK RGLTPLAGELGIHVCGGRGRHSRATPSELLAVGDAVGLDGAALAQASRLVAKVDSAAVQDGFDLYLHGFIVSDDGRWVVV QQGMHGQRKQARRYHWLSEGLSSFVDAPHAAIEGAHQGNIVNLADHRAAASRDAQVELLRSTAPDRLARQWQRIAGVEAP AAQGPLTGDLFAGHAWDPAQHPHLSMPDHHDVRSENVITRRLHASLAAAAEAGPRDFTALLQVPGVGARTLRSLAMVAEV MHGTPCRFSDPARFSLAHGGKDRQPFPVPTRVLDHTIGVLKQAMQQAKLGNDERLQAIARLDAQARRLEASAQGPTVDDY IAQERRDSHRYGGRSVFGWEPAPEDAHAVQPAQAHAGRR >Mature_438_residues SRRGGSADLPLHGGRVPRWLGERMTRLGAVMCEAIVHSYGRDELLRRLAHPFWFQSFGAVMGMDWHSSGITTSVIGALKR GLTPLAGELGIHVCGGRGRHSRATPSELLAVGDAVGLDGAALAQASRLVAKVDSAAVQDGFDLYLHGFIVSDDGRWVVVQ QGMHGQRKQARRYHWLSEGLSSFVDAPHAAIEGAHQGNIVNLADHRAAASRDAQVELLRSTAPDRLARQWQRIAGVEAPA AQGPLTGDLFAGHAWDPAQHPHLSMPDHHDVRSENVITRRLHASLAAAAEAGPRDFTALLQVPGVGARTLRSLAMVAEVM HGTPCRFSDPARFSLAHGGKDRQPFPVPTRVLDHTIGVLKQAMQQAKLGNDERLQAIARLDAQARRLEASAQGPTVDDYI AQERRDSHRYGGRSVFGWEPAPEDAHAVQPAQAHAGRR
Specific function: Unknown
COG id: COG1415
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47509; Mature: 47378
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRGGSADLPLHGGRVPRWLGERMTRLGAVMCEAIVHSYGRDELLRRLAHPFWFQSFGA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHH VMGMDWHSSGITTSVIGALKRGLTPLAGELGIHVCGGRGRHSRATPSELLAVGDAVGLDG HHCCCCCCCCCHHHHHHHHHHCCCCCHHCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCH AALAQASRLVAKVDSAAVQDGFDLYLHGFIVSDDGRWVVVQQGMHGQRKQARRYHWLSEG HHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHH LSSFVDAPHAAIEGAHQGNIVNLADHRAAASRDAQVELLRSTAPDRLARQWQRIAGVEAP HHHHHCCCHHHHCCCCCCCEEEEHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCC AAQGPLTGDLFAGHAWDPAQHPHLSMPDHHDVRSENVITRRLHASLAAAAEAGPRDFTAL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH LQVPGVGARTLRSLAMVAEVMHGTPCRFSDPARFSLAHGGKDRQPFPVPTRVLDHTIGVL HHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHH KQAMQQAKLGNDERLQAIARLDAQARRLEASAQGPTVDDYIAQERRDSHRYGGRSVFGWE HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC PAPEDAHAVQPAQAHAGRR CCCCCCHHCCCHHHHCCCC >Mature Secondary Structure SRRGGSADLPLHGGRVPRWLGERMTRLGAVMCEAIVHSYGRDELLRRLAHPFWFQSFGA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHH VMGMDWHSSGITTSVIGALKRGLTPLAGELGIHVCGGRGRHSRATPSELLAVGDAVGLDG HHCCCCCCCCCHHHHHHHHHHCCCCCHHCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCH AALAQASRLVAKVDSAAVQDGFDLYLHGFIVSDDGRWVVVQQGMHGQRKQARRYHWLSEG HHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHH LSSFVDAPHAAIEGAHQGNIVNLADHRAAASRDAQVELLRSTAPDRLARQWQRIAGVEAP HHHHHCCCHHHHCCCCCCCEEEEHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCC AAQGPLTGDLFAGHAWDPAQHPHLSMPDHHDVRSENVITRRLHASLAAAAEAGPRDFTAL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH LQVPGVGARTLRSLAMVAEVMHGTPCRFSDPARFSLAHGGKDRQPFPVPTRVLDHTIGVL HHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHH KQAMQQAKLGNDERLQAIARLDAQARRLEASAQGPTVDDYIAQERRDSHRYGGRSVFGWE HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC PAPEDAHAVQPAQAHAGRR CCCCCCHHCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA