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The map label for this gene is yceD [H]

Identifier: 21241876

GI number: 21241876

Start: 1273549

End: 1274058

Strand: Direct

Name: yceD [H]

Synonym: XAC1121

Alternate gene names: 21241876

Gene position: 1273549-1274058 (Clockwise)

Preceding gene: 21241874

Following gene: 21241877

Centisome position: 24.61

GC content: 60.59

Gene sequence:

>510_bases
ATGTCCGCGAACGTGCCCGAAATGCTGGATGCTTGGCGGATGGTCGCAGCGCGCAGGCGCTTCGATGGCCGCATCCCGCT
ATCTGCGATGACCCGTTTGCAGGGAAGCCTTGTCGATACCGACGGCGAATGTGTCTATTCGCTTCAATTCGATCAAGACC
CTCTGCTCAAGGTCGCCTATGTCGAACTCAGTATCGATGTGGAGCTTCCGCTGGCCTGCCAGCGCAGCCTGCAACGCTTC
CTGTATCCGGTGCAAATCAGACAGCGTCTTGGTTTGATCCGTGACGAGGCCGACGAAGCTGCATTGCCGGCCGAGTACGA
AGCGTTGCTGGTGCCGGAAGATGGCATGCTGCGGGCCGTCGACATGATCGAGGACGAGCTGGTGCTCTCAGTACCGGTGG
TGCCGGTGGCGCCGGGTAGCGAAGCGATCGACGCCGAATGGGTTCCGACCCAGGAAGAGCAAGACAGGGCCAGTCCGTTC
GCGGCGCTGGCAGCGTTGAAGAAACAGTAA

Upstream 100 bases:

>100_bases
GAGGGGGGCAGGGGAGTCTGCCGTCCTGCGGGCCGCGCGGCAATCGCATGAATTGGGTCATTTGACAGGGCTGCCGCGGG
TCTTTAACATTCTGCGGCTT

Downstream 100 bases:

>100_bases
CCGCCGCTGTTAAGGGCGGTAAGACAGGTCGACGCGGGCGTAGAGCGTGCTGTTCGACTCAACAGACAAGTTATCGAACT
AAAGTTGGAGCAATCCCATG

Product: hypothetical protein

Products: NA

Alternate protein names: G30K [H]

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MSANVPEMLDAWRMVAARRRFDGRIPLSAMTRLQGSLVDTDGECVYSLQFDQDPLLKVAYVELSIDVELPLACQRSLQRF
LYPVQIRQRLGLIRDEADEAALPAEYEALLVPEDGMLRAVDMIEDELVLSVPVVPVAPGSEAIDAEWVPTQEEQDRASPF
AALAALKKQ

Sequences:

>Translated_169_residues
MSANVPEMLDAWRMVAARRRFDGRIPLSAMTRLQGSLVDTDGECVYSLQFDQDPLLKVAYVELSIDVELPLACQRSLQRF
LYPVQIRQRLGLIRDEADEAALPAEYEALLVPEDGMLRAVDMIEDELVLSVPVVPVAPGSEAIDAEWVPTQEEQDRASPF
AALAALKKQ
>Mature_168_residues
SANVPEMLDAWRMVAARRRFDGRIPLSAMTRLQGSLVDTDGECVYSLQFDQDPLLKVAYVELSIDVELPLACQRSLQRFL
YPVQIRQRLGLIRDEADEAALPAEYEALLVPEDGMLRAVDMIEDELVLSVPVVPVAPGSEAIDAEWVPTQEEQDRASPFA
ALAALKKQ

Specific function: Unknown

COG id: COG1399

COG function: function code R; Predicted metal-binding, possibly nucleic acid-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0159 [H]

Homologues:

Organism=Escherichia coli, GI1787329, Length=172, Percent_Identity=31.3953488372093, Blast_Score=70, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003772 [H]

Pfam domain/function: PF02620 DUF177 [H]

EC number: NA

Molecular weight: Translated: 18826; Mature: 18695

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSANVPEMLDAWRMVAARRRFDGRIPLSAMTRLQGSLVDTDGECVYSLQFDQDPLLKVAY
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEECCCCCEEEEEECCCCCCEEEEE
VELSIDVELPLACQRSLQRFLYPVQIRQRLGLIRDEADEAALPAEYEALLVPEDGMLRAV
EEEEEEECCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCEEEEECCCCCHHHH
DMIEDELVLSVPVVPVAPGSEAIDAEWVPTQEEQDRASPFAALAALKKQ
HHHCCCEEEECCCEEECCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCC
>Mature Secondary Structure 
SANVPEMLDAWRMVAARRRFDGRIPLSAMTRLQGSLVDTDGECVYSLQFDQDPLLKVAY
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEECCCCCEEEEEECCCCCCEEEEE
VELSIDVELPLACQRSLQRFLYPVQIRQRLGLIRDEADEAALPAEYEALLVPEDGMLRAV
EEEEEEECCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCEEEEECCCCCHHHH
DMIEDELVLSVPVVPVAPGSEAIDAEWVPTQEEQDRASPFAALAALKKQ
HHHCCCEEEECCCEEECCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]