| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241874
Identifier: 21241874
GI number: 21241874
Start: 1270988
End: 1272574
Strand: Direct
Name: 21241874
Synonym: XAC1119
Alternate gene names: NA
Gene position: 1270988-1272574 (Clockwise)
Preceding gene: 21241873
Following gene: 21241876
Centisome position: 24.56
GC content: 65.03
Gene sequence:
>1587_bases ATGCAGAGCTATTTCAGCCCGCTGCTCGATGCGATGCATGCCTGGCTGATGCTGCAGCTGCCCGGGCCGGTGGCCGGTGC GTTGCTCGGTGGCTTGCATGCGCTGGTCTTCATCCCGCTGGCGGCGCTGGCGTGGCGGGTATTGTCGAATGAATCCCGCC GCGCGCAGTGGGTGCCGCTGTTCGCGTTGGCTGGAATGTGCAGTGCGGTGTTCCTGTCCGAACTCGGCAACACCATGGGG GACACAGCCAGTGCAATTCCGGTGCTGGCTGCATTGGCGGTTGTGTTGTTGGCGCAGTTCAGGGCGCGCAATGGCTTGCA CGTCGTGCATCTGTGGGCCGTTGCTGGTGCGTTGATCGGCCTGGCGGTGGCGCTCAAGCTCACCAATGCGTTGTATGCGT TGGCATTGGTGCCGGCAGTGCTGTGCGACGGTGGCCGCCTGCGCTCGCGCGTGCTCGCGTTGAGTGTGCTGGCGGGCGTT GCGCTGCTGGTGCTGTTGCTGGTGGCTGGCCCTTGGTATTGGCAGGTCTGGCAGCACCTGGGCAACCCGCTGTTTCCACA GTTCAACGGCGTGTTCAAATCGCCGCTGGCCCAGCCGGTCTCGATCGCTGATGTGCGCTGGTTGCCGCGCACTATCGGCG AGCAGCTCATCTGGCCGCTGCTGTTTACGCTCAAGCCGCAGCGCATCGGCGATCTCGGTCTGGTGCAGGCGGGCTGGGCA GTGCTGTATGGGGTGGTGGCGATTGCTGCAGGGCGTGCGTTGGTGCGTCGTCCGGTGCGTGCTGCCGCTGTCGATCGCGC TGCCATCGTGCTGCTGGTGTTCTTTGGCGTGGCGTATGCGCTGTGGCAGGCGATTTTCAGCATCCACCGCTATCTGGTGG TACTGGAGCTGCTGGCGCCGCTGGTGCTGTGGATCGTGTGCCGGCATGCATTTGCCGCGCGCGCAAATCGCAAGGCCGCC TGGTTGATCGGCGCATGCGCGCTGGTTGCGGTGGTCGGCTGGAAGGACTGGGGGCATGAGTCCTGGGCGCGCGAGAGCTT CCAGGTGGAGCAGCCGGTGCTCGGGAATCCCGCAGCGTCCAGTGTGTTGCTGGTCGGCGACGAACCGCAATCCTGGCGCG TGCCGTTGTTGCCGTCGCAGGCGCGCTACATCGGGGTTGCCACCAATATCTCCGAGACCGACCACTACCGACAGCGCGTG CGTGCATTGATTGCCGAGCGACCGCAGCTTTACGCGATGTTGGGGGCGGCGCGTGACAAGCAGCAAGTGCGCATCGATCG CATGAATCGCCTGGCGCAGCAGTTCGGCTGGGAGCGTCAGCCGGGCTGCTCGCGGCTGCGCTGGTTGGTCGCACGCGGTC TACGTGCCGAACTGGATACCTCACAGCCTGATCGCTGCGTACTGGCTATTCCCAAAGGCAAGGCGCTGGATATCGCAGCC GCAGATCAGGCCGTGCGCGAGGCTGCGCAACAGCGTCTGGCAGCGTACGGGCTGACGTTGGATCCCGCGCGTTGCCGCAC GCTGTCCTCGCAGGTGGGGCAGGCCGTCTATCCGTATCAGTTCTGTCAGCTGGCGCTACCGAATTAA
Upstream 100 bases:
>100_bases CCTGGGGCAGGACGCCAATTGGGATTTGCGCAATTACCATCTTTATATCGGCGATGCCTGGGCAAGCGACCGACTGGGCA CGGATCTGGCCCCAGCGCAG
Downstream 100 bases:
>100_bases GAGCAGCCAACAAGCGCCTGCGCTCACCGCCAGGCGGACGCGGCCGCCGCTCGGTGCTGCATGCGCCACGCGTGCACTGC TGTTCCTGCTCGCCGCCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 528; Mature: 528
Protein sequence:
>528_residues MQSYFSPLLDAMHAWLMLQLPGPVAGALLGGLHALVFIPLAALAWRVLSNESRRAQWVPLFALAGMCSAVFLSELGNTMG DTASAIPVLAALAVVLLAQFRARNGLHVVHLWAVAGALIGLAVALKLTNALYALALVPAVLCDGGRLRSRVLALSVLAGV ALLVLLLVAGPWYWQVWQHLGNPLFPQFNGVFKSPLAQPVSIADVRWLPRTIGEQLIWPLLFTLKPQRIGDLGLVQAGWA VLYGVVAIAAGRALVRRPVRAAAVDRAAIVLLVFFGVAYALWQAIFSIHRYLVVLELLAPLVLWIVCRHAFAARANRKAA WLIGACALVAVVGWKDWGHESWARESFQVEQPVLGNPAASSVLLVGDEPQSWRVPLLPSQARYIGVATNISETDHYRQRV RALIAERPQLYAMLGAARDKQQVRIDRMNRLAQQFGWERQPGCSRLRWLVARGLRAELDTSQPDRCVLAIPKGKALDIAA ADQAVREAAQQRLAAYGLTLDPARCRTLSSQVGQAVYPYQFCQLALPN
Sequences:
>Translated_528_residues MQSYFSPLLDAMHAWLMLQLPGPVAGALLGGLHALVFIPLAALAWRVLSNESRRAQWVPLFALAGMCSAVFLSELGNTMG DTASAIPVLAALAVVLLAQFRARNGLHVVHLWAVAGALIGLAVALKLTNALYALALVPAVLCDGGRLRSRVLALSVLAGV ALLVLLLVAGPWYWQVWQHLGNPLFPQFNGVFKSPLAQPVSIADVRWLPRTIGEQLIWPLLFTLKPQRIGDLGLVQAGWA VLYGVVAIAAGRALVRRPVRAAAVDRAAIVLLVFFGVAYALWQAIFSIHRYLVVLELLAPLVLWIVCRHAFAARANRKAA WLIGACALVAVVGWKDWGHESWARESFQVEQPVLGNPAASSVLLVGDEPQSWRVPLLPSQARYIGVATNISETDHYRQRV RALIAERPQLYAMLGAARDKQQVRIDRMNRLAQQFGWERQPGCSRLRWLVARGLRAELDTSQPDRCVLAIPKGKALDIAA ADQAVREAAQQRLAAYGLTLDPARCRTLSSQVGQAVYPYQFCQLALPN >Mature_528_residues MQSYFSPLLDAMHAWLMLQLPGPVAGALLGGLHALVFIPLAALAWRVLSNESRRAQWVPLFALAGMCSAVFLSELGNTMG DTASAIPVLAALAVVLLAQFRARNGLHVVHLWAVAGALIGLAVALKLTNALYALALVPAVLCDGGRLRSRVLALSVLAGV ALLVLLLVAGPWYWQVWQHLGNPLFPQFNGVFKSPLAQPVSIADVRWLPRTIGEQLIWPLLFTLKPQRIGDLGLVQAGWA VLYGVVAIAAGRALVRRPVRAAAVDRAAIVLLVFFGVAYALWQAIFSIHRYLVVLELLAPLVLWIVCRHAFAARANRKAA WLIGACALVAVVGWKDWGHESWARESFQVEQPVLGNPAASSVLLVGDEPQSWRVPLLPSQARYIGVATNISETDHYRQRV RALIAERPQLYAMLGAARDKQQVRIDRMNRLAQQFGWERQPGCSRLRWLVARGLRAELDTSQPDRCVLAIPKGKALDIAA ADQAVREAAQQRLAAYGLTLDPARCRTLSSQVGQAVYPYQFCQLALPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57675; Mature: 57675
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSYFSPLLDAMHAWLMLQLPGPVAGALLGGLHALVFIPLAALAWRVLSNESRRAQWVPL CCHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH FALAGMCSAVFLSELGNTMGDTASAIPVLAALAVVLLAQFRARNGLHVVHLWAVAGALIG HHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LAVALKLTNALYALALVPAVLCDGGRLRSRVLALSVLAGVALLVLLLVAGPWYWQVWQHL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC GNPLFPQFNGVFKSPLAQPVSIADVRWLPRTIGEQLIWPLLFTLKPQRIGDLGLVQAGWA CCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHH VLYGVVAIAAGRALVRRPVRAAAVDRAAIVLLVFFGVAYALWQAIFSIHRYLVVLELLAP HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVLWIVCRHAFAARANRKAAWLIGACALVAVVGWKDWGHESWARESFQVEQPVLGNPAAS HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCC SVLLVGDEPQSWRVPLLPSQARYIGVATNISETDHYRQRVRALIAERPQLYAMLGAARDK CEEEECCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCH QQVRIDRMNRLAQQFGWERQPGCSRLRWLVARGLRAELDTSQPDRCVLAIPKGKALDIAA HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHCCCCCCCCEEEEECCCCEEEHHH ADQAVREAAQQRLAAYGLTLDPARCRTLSSQVGQAVYPYQFCQLALPN HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCC >Mature Secondary Structure MQSYFSPLLDAMHAWLMLQLPGPVAGALLGGLHALVFIPLAALAWRVLSNESRRAQWVPL CCHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH FALAGMCSAVFLSELGNTMGDTASAIPVLAALAVVLLAQFRARNGLHVVHLWAVAGALIG HHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LAVALKLTNALYALALVPAVLCDGGRLRSRVLALSVLAGVALLVLLLVAGPWYWQVWQHL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC GNPLFPQFNGVFKSPLAQPVSIADVRWLPRTIGEQLIWPLLFTLKPQRIGDLGLVQAGWA CCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHH VLYGVVAIAAGRALVRRPVRAAAVDRAAIVLLVFFGVAYALWQAIFSIHRYLVVLELLAP HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVLWIVCRHAFAARANRKAAWLIGACALVAVVGWKDWGHESWARESFQVEQPVLGNPAAS HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCC SVLLVGDEPQSWRVPLLPSQARYIGVATNISETDHYRQRVRALIAERPQLYAMLGAARDK CEEEECCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCH QQVRIDRMNRLAQQFGWERQPGCSRLRWLVARGLRAELDTSQPDRCVLAIPKGKALDIAA HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHCCCCCCCCEEEEECCCCEEEHHH ADQAVREAAQQRLAAYGLTLDPARCRTLSSQVGQAVYPYQFCQLALPN HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA