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The map label for this gene is slp [H]

Identifier: 21241868

GI number: 21241868

Start: 1263470

End: 1263970

Strand: Reverse

Name: slp [H]

Synonym: XAC1113

Alternate gene names: 21241868

Gene position: 1263970-1263470 (Counterclockwise)

Preceding gene: 21241869

Following gene: 77748559

Centisome position: 24.42

GC content: 68.26

Gene sequence:

>501_bases
GTGCTCGGGCTCGCAGCCTGCGCCACCGCACCCAAGCCGCTGCAGGGCCAGTTCCCCGCGGTCAGTCCGAGCGATTCCAC
CGCCAGCGCCCAGGTCGGCACGCCCGTGCGCTGGGGTGGCAAGATCATCAAGACCACGCCTGGCCAGGGCCAGACCTGCT
TCGAGCTGATCTCGCGCCCGCTCAATGCCAGCGGTCGCCCCGACCGTAATGCCGTGGATGCCAGCGATGGCCGCTTCCTG
GCCTGCCGCTCTGGCTTCTACGATCCAGCGGTGTTCGAGCCGGGGCGCGAAGTGACCTTCATCGGCAAGATCGAAGGCTA
CGAAACCACCCAGATCGGCGAGTACGACTACAAGCTGCCCAAGGTCAATGCCGACGTGGTCTACCTGTGGCCGATCGTGC
GCGATGTGGAAGTCGTGCCGGCTTACCCGTATGGCCCGTGGGGCGACCCGTGGGGTCCGCGCTGGGGCGGCGGTTGGGGT
TGGGGCCGCGGCTGGTGGTGA

Upstream 100 bases:

>100_bases
CTGATTCGGACAGCGCCCCTCTCTTGAAAGACTTGCTGCAGCATCGCCCGCGAACCGGAGCTTCCTCATGAGTACCCGTT
TTCTTGTTCCTCTTATCGCT

Downstream 100 bases:

>100_bases
TGCGCCGCTGACCTAAGCGTGACTCGCAAAAACGCCGCTCGCAGGGAGCGGCGTTTTTGTCTGTGCGCGATGATCGCTGG
TTACGCGGCTTGCCCGCAAC

Product: outer membrane protein Slp

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MLGLAACATAPKPLQGQFPAVSPSDSTASAQVGTPVRWGGKIIKTTPGQGQTCFELISRPLNASGRPDRNAVDASDGRFL
ACRSGFYDPAVFEPGREVTFIGKIEGYETTQIGEYDYKLPKVNADVVYLWPIVRDVEVVPAYPYGPWGDPWGPRWGGGWG
WGRGWW

Sequences:

>Translated_166_residues
MLGLAACATAPKPLQGQFPAVSPSDSTASAQVGTPVRWGGKIIKTTPGQGQTCFELISRPLNASGRPDRNAVDASDGRFL
ACRSGFYDPAVFEPGREVTFIGKIEGYETTQIGEYDYKLPKVNADVVYLWPIVRDVEVVPAYPYGPWGDPWGPRWGGGWG
WGRGWW
>Mature_166_residues
MLGLAACATAPKPLQGQFPAVSPSDSTASAQVGTPVRWGGKIIKTTPGQGQTCFELISRPLNASGRPDRNAVDASDGRFL
ACRSGFYDPAVFEPGREVTFIGKIEGYETTQIGEYDYKLPKVNADVVYLWPIVRDVEVVPAYPYGPWGDPWGPRWGGGWG
WGRGWW

Specific function: The induction of slp may help to stabilize the outer membrane during carbon starvation and stationary phase [H]

COG id: COG3065

COG function: function code M; Starvation-inducible outer membrane lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082278, Length=163, Percent_Identity=31.2883435582822, Blast_Score=69, Evalue=1e-13,
Organism=Escherichia coli, GI1788108, Length=150, Percent_Identity=31.3333333333333, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004658 [H]

Pfam domain/function: PF03843 Slp [H]

EC number: NA

Molecular weight: Translated: 18092; Mature: 18092

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGLAACATAPKPLQGQFPAVSPSDSTASAQVGTPVRWGGKIIKTTPGQGQTCFELISRP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCC
LNASGRPDRNAVDASDGRFLACRSGFYDPAVFEPGREVTFIGKIEGYETTQIGEYDYKLP
CCCCCCCCCCCCCCCCCCEEEECCCCCCCCEECCCCCEEEEEECCCCCCEECCCCCCCCC
KVNADVVYLWPIVRDVEVVPAYPYGPWGDPWGPRWGGGWGWGRGWW
CCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLGLAACATAPKPLQGQFPAVSPSDSTASAQVGTPVRWGGKIIKTTPGQGQTCFELISRP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCC
LNASGRPDRNAVDASDGRFLACRSGFYDPAVFEPGREVTFIGKIEGYETTQIGEYDYKLP
CCCCCCCCCCCCCCCCCCEEEECCCCCCCCEECCCCCEEEEEECCCCCCEECCCCCCCCC
KVNADVVYLWPIVRDVEVVPAYPYGPWGDPWGPRWGGGWGWGRGWW
CCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8022277; 8041620; 9278503 [H]