Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

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The map label for this gene is yebA [H]

Identifier: 21241869

GI number: 21241869

Start: 1264000

End: 1265952

Strand: Reverse

Name: yebA [H]

Synonym: XAC1114

Alternate gene names: 21241869

Gene position: 1265952-1264000 (Counterclockwise)

Preceding gene: 21241870

Following gene: 21241868

Centisome position: 24.46

GC content: 68.1

Gene sequence:

>1953_bases
ATGACTGAGCCCGCCCTCCCGATCAGCCAGGCCAGCCGCGCCTGGGTGCTGGCCACCAGTTGGCTGGCATTGACGCCGTT
GCTGTTGCAGTTGCCGGGCCTGCTTGCGGCCACTGTCGCGGTGGCCGCGGTGCTGGTCGGCGTGCTGAGCTGGCGCGGCA
CCTTGATGGCGCCGGTGCGGCTGTTGTTGGTGATCGCAATGCTGGCGGCGGTGTATTGGCAGATCGGCATGCGCTTCGGC
CGCGACACCGGCTGCGCGGTGCTGGCATCGATGCTGGCGATCAAGGCCTCCGAGCTGCGCACCCTGCGCGATGCACGCAG
CCTGTTGGGTTTTGCGTTGTTCGCACCGTTTGCCGCCTTTCTGCTCGACCAGGGCCCGGCGACGATGGGCCTGGCGCTGC
TGGCGGTGGTCAGCGCCTTGCTGAGCATGCAGCGGCTGGCCGACGAAGAACACCATACCGCCACGCCGGCCCTGCGCCTG
CAATTGCGCGGTATCGGCAAGCTGGTTGCCATCGGCGTGCCGCTGGCCCTGGCCACGTTCTGGTTGCTGCCGCGCCTGAG
TGCGCCGCTGTGGGGCGTGCCCGAACGCGCGCTCTCCCGGCCTGGCTTGTCGGACAACATGTCGCCAGGCGAATGGATCG
ACCTGATGGCCGACGACAGCCCGGCCTTGCGCGTGCAATTCGCCGGCAAGGCGCCACCGCCGCAACAGCGCTATTGGCGC
GGTCCGGTGATGTGGGACTTCGACGGCCGCACCTGGCAGCGCGCGCGCTGGACCGGCCGCGCCCAGCCCGCTTCGGTCAC
CGCAGGCCCGCAAACCTACCGTTACCGCCTGGATTACGAGCCCACCGATCGCCGCCAACTGGTGTCGCTGGATCTGCCTA
CCCAGGGCGTGCCCAACGCCGAGTTATCGCCCGACTACGAACTGTTCGCGCAACGGCCGTTGAGTGCACTGACCCGCTGG
GACCTGCAATCGGCACCGCCAACGCGCTTCGATGCCGACCTGCCCGATCAGTTGCGCAAGCGTGCCCTTGCCCTGCCGCC
CGGTTTCAATCCGCGCACGCTGACGCTGGCACGGCAATGGCGTCGCGAGGCCGGCAACAACGACGATGCGGTGGTGCAGC
GCGCGCTGCAGTGGATCACCCGCGAATTCGCCTACACGCTCGAAACGCCGCTGCTCGGCCGCAACAGCGTCGACGAATTC
CTGTTTCAGCAAAAGGCCGGTTTCTGCGAACACTTCAGCTCCTCGTTCGTGGTGCTGATGCGCGCGGCCGGCATCCCGGC
GCGCGTGGTGACCGGGTACGCCGGCGGCACTTACAACCGGCTGGGCAATTACTGGGTGGTACGGCGCATGGATGCGCATG
CCTGGACCGAAGTCTGGCTGGCCGGGCGTGGCTGGGCGCGCGTGGACCCCACCGCCGCAGTGGCGCCGGAACGCATCTAC
GACACGCTCGAAGATCGCCTGCAAACCGGCGGCGGCAACGACTTCGCCGACCTTGGCACATGGGCCAGCCTGGGCCAGGT
CAGCGACTGGCTGCGGCGAGGCTGGAACGAGCTGGTGCTGTCCTTCGATGCCGATCGCCAGCAACGGCTGCTGCAACCCT
TCGGCATCGATCGCCTGGACACCTCGCAACTGGCCGCCATCTTCGGCGTGTTCGCGGTGAGCGCGCTGGCGTGGATGGGC
TGGCTGCTGGCACGGGGCGAACGTGAGCGCGACCCGTTGCTGCGCGCCTGGCACCGACTGAGCCACCGCTACCGCAAGCT
CGGCCTTGCCCGTGAACCGCACGAACCGGCCAGTGTGTGGGCGCAACGTGTCGCCCGCTCACACCCGAATACGCCCCTGT
TGGCACTCAGCCAACGTTTCGCTGCCGCGCGATACGCTGGCGCTGATTCGGACAGCGCCCCTCTCTTGAAAGACTTGCTG
CAGCATCGCCCGCGAACCGGAGCTTCCTCATGA

Upstream 100 bases:

>100_bases
CGCCGTTATCGCCTGCTGCTGCCTGGCCAGCCACCGTTAGGTCCCGCGCAGGGACCTTCGCACCACCACCTGTGCCAACG
CGCCCTGGCCCTGCTTCCGC

Downstream 100 bases:

>100_bases
GTACCCGTTTTCTTGTTCCTCTTATCGCTGTGCTCGGGCTCGCAGCCTGCGCCACCGCACCCAAGCCGCTGCAGGGCCAG
TTCCCCGCGGTCAGTCCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 650; Mature: 649

Protein sequence:

>650_residues
MTEPALPISQASRAWVLATSWLALTPLLLQLPGLLAATVAVAAVLVGVLSWRGTLMAPVRLLLVIAMLAAVYWQIGMRFG
RDTGCAVLASMLAIKASELRTLRDARSLLGFALFAPFAAFLLDQGPATMGLALLAVVSALLSMQRLADEEHHTATPALRL
QLRGIGKLVAIGVPLALATFWLLPRLSAPLWGVPERALSRPGLSDNMSPGEWIDLMADDSPALRVQFAGKAPPPQQRYWR
GPVMWDFDGRTWQRARWTGRAQPASVTAGPQTYRYRLDYEPTDRRQLVSLDLPTQGVPNAELSPDYELFAQRPLSALTRW
DLQSAPPTRFDADLPDQLRKRALALPPGFNPRTLTLARQWRREAGNNDDAVVQRALQWITREFAYTLETPLLGRNSVDEF
LFQQKAGFCEHFSSSFVVLMRAAGIPARVVTGYAGGTYNRLGNYWVVRRMDAHAWTEVWLAGRGWARVDPTAAVAPERIY
DTLEDRLQTGGGNDFADLGTWASLGQVSDWLRRGWNELVLSFDADRQQRLLQPFGIDRLDTSQLAAIFGVFAVSALAWMG
WLLARGERERDPLLRAWHRLSHRYRKLGLAREPHEPASVWAQRVARSHPNTPLLALSQRFAAARYAGADSDSAPLLKDLL
QHRPRTGASS

Sequences:

>Translated_650_residues
MTEPALPISQASRAWVLATSWLALTPLLLQLPGLLAATVAVAAVLVGVLSWRGTLMAPVRLLLVIAMLAAVYWQIGMRFG
RDTGCAVLASMLAIKASELRTLRDARSLLGFALFAPFAAFLLDQGPATMGLALLAVVSALLSMQRLADEEHHTATPALRL
QLRGIGKLVAIGVPLALATFWLLPRLSAPLWGVPERALSRPGLSDNMSPGEWIDLMADDSPALRVQFAGKAPPPQQRYWR
GPVMWDFDGRTWQRARWTGRAQPASVTAGPQTYRYRLDYEPTDRRQLVSLDLPTQGVPNAELSPDYELFAQRPLSALTRW
DLQSAPPTRFDADLPDQLRKRALALPPGFNPRTLTLARQWRREAGNNDDAVVQRALQWITREFAYTLETPLLGRNSVDEF
LFQQKAGFCEHFSSSFVVLMRAAGIPARVVTGYAGGTYNRLGNYWVVRRMDAHAWTEVWLAGRGWARVDPTAAVAPERIY
DTLEDRLQTGGGNDFADLGTWASLGQVSDWLRRGWNELVLSFDADRQQRLLQPFGIDRLDTSQLAAIFGVFAVSALAWMG
WLLARGERERDPLLRAWHRLSHRYRKLGLAREPHEPASVWAQRVARSHPNTPLLALSQRFAAARYAGADSDSAPLLKDLL
QHRPRTGASS
>Mature_649_residues
TEPALPISQASRAWVLATSWLALTPLLLQLPGLLAATVAVAAVLVGVLSWRGTLMAPVRLLLVIAMLAAVYWQIGMRFGR
DTGCAVLASMLAIKASELRTLRDARSLLGFALFAPFAAFLLDQGPATMGLALLAVVSALLSMQRLADEEHHTATPALRLQ
LRGIGKLVAIGVPLALATFWLLPRLSAPLWGVPERALSRPGLSDNMSPGEWIDLMADDSPALRVQFAGKAPPPQQRYWRG
PVMWDFDGRTWQRARWTGRAQPASVTAGPQTYRYRLDYEPTDRRQLVSLDLPTQGVPNAELSPDYELFAQRPLSALTRWD
LQSAPPTRFDADLPDQLRKRALALPPGFNPRTLTLARQWRREAGNNDDAVVQRALQWITREFAYTLETPLLGRNSVDEFL
FQQKAGFCEHFSSSFVVLMRAAGIPARVVTGYAGGTYNRLGNYWVVRRMDAHAWTEVWLAGRGWARVDPTAAVAPERIYD
TLEDRLQTGGGNDFADLGTWASLGQVSDWLRRGWNELVLSFDADRQQRLLQPFGIDRLDTSQLAAIFGVFAVSALAWMGW
LLARGERERDPLLRAWHRLSHRYRKLGLAREPHEPASVWAQRVARSHPNTPLLALSQRFAAARYAGADSDSAPLLKDLLQ
HRPRTGASS

Specific function: Unknown

COG id: COG1305

COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002931 [H]

Pfam domain/function: PF01841 Transglut_core [H]

EC number: NA

Molecular weight: Translated: 72201; Mature: 72070

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEPALPISQASRAWVLATSWLALTPLLLQLPGLLAATVAVAAVLVGVLSWRGTLMAPVR
CCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LLLVIAMLAAVYWQIGMRFGRDTGCAVLASMLAIKASELRTLRDARSLLGFALFAPFAAF
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLDQGPATMGLALLAVVSALLSMQRLADEEHHTATPALRLQLRGIGKLVAIGVPLALATF
HHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHH
WLLPRLSAPLWGVPERALSRPGLSDNMSPGEWIDLMADDSPALRVQFAGKAPPPQQRYWR
HHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCHHHHCC
GPVMWDFDGRTWQRARWTGRAQPASVTAGPQTYRYRLDYEPTDRRQLVSLDLPTQGVPNA
CCEEECCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCC
ELSPDYELFAQRPLSALTRWDLQSAPPTRFDADLPDQLRKRALALPPGFNPRTLTLARQW
CCCCCHHHHHHCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHH
RREAGNNDDAVVQRALQWITREFAYTLETPLLGRNSVDEFLFQQKAGFCEHFSSSFVVLM
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RAAGIPARVVTGYAGGTYNRLGNYWVVRRMDAHAWTEVWLAGRGWARVDPTAAVAPERIY
HHCCCCHHHHCCCCCCCHHHCCCEEEEEECCHHHHHHHHHCCCCCCCCCCHHHCCHHHHH
DTLEDRLQTGGGNDFADLGTWASLGQVSDWLRRGWNELVLSFDADRQQRLLQPFGIDRLD
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHEEEECCCHHHHHHHHHCCCCCCC
TSQLAAIFGVFAVSALAWMGWLLARGERERDPLLRAWHRLSHRYRKLGLAREPHEPASVW
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
AQRVARSHPNTPLLALSQRFAAARYAGADSDSAPLLKDLLQHRPRTGASS
HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TEPALPISQASRAWVLATSWLALTPLLLQLPGLLAATVAVAAVLVGVLSWRGTLMAPVR
CCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LLLVIAMLAAVYWQIGMRFGRDTGCAVLASMLAIKASELRTLRDARSLLGFALFAPFAAF
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLDQGPATMGLALLAVVSALLSMQRLADEEHHTATPALRLQLRGIGKLVAIGVPLALATF
HHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHH
WLLPRLSAPLWGVPERALSRPGLSDNMSPGEWIDLMADDSPALRVQFAGKAPPPQQRYWR
HHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCHHHHCC
GPVMWDFDGRTWQRARWTGRAQPASVTAGPQTYRYRLDYEPTDRRQLVSLDLPTQGVPNA
CCEEECCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCC
ELSPDYELFAQRPLSALTRWDLQSAPPTRFDADLPDQLRKRALALPPGFNPRTLTLARQW
CCCCCHHHHHHCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHH
RREAGNNDDAVVQRALQWITREFAYTLETPLLGRNSVDEFLFQQKAGFCEHFSSSFVVLM
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RAAGIPARVVTGYAGGTYNRLGNYWVVRRMDAHAWTEVWLAGRGWARVDPTAAVAPERIY
HHCCCCHHHHCCCCCCCHHHCCCEEEEEECCHHHHHHHHHCCCCCCCCCCHHHCCHHHHH
DTLEDRLQTGGGNDFADLGTWASLGQVSDWLRRGWNELVLSFDADRQQRLLQPFGIDRLD
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHEEEECCCHHHHHHHHHCCCCCCC
TSQLAAIFGVFAVSALAWMGWLLARGERERDPLLRAWHRLSHRYRKLGLAREPHEPASVW
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
AQRVARSHPNTPLLALSQRFAAARYAGADSDSAPLLKDLLQHRPRTGASS
HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969499; 9384377 [H]