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The map label for this gene is opsX [H]

Identifier: 21241850

GI number: 21241850

Start: 1247218

End: 1248267

Strand: Reverse

Name: opsX [H]

Synonym: XAC1094

Alternate gene names: 21241850

Gene position: 1248267-1247218 (Counterclockwise)

Preceding gene: 21241861

Following gene: 21241848

Centisome position: 24.12

GC content: 66.76

Gene sequence:

>1050_bases
ATGGCTGTAACGCCCGCATCGCTGTGTTTGCTGCGCTTGTCCGCCCTGGGCGATGTCACGCACGTGGTGCCACTGGTACG
CACGCTGCAGGCAGGGTTTCCTGAAACCCAACTGCATTGGATCATCGACCGGGCCGGGCTCAAATTGCTCGATGGCCTGC
CCGGCGTGCAGTTCCATGCCTACGACAAACGCAGTGGCGTGGCCGGCATGCGCGCGCTCCGTCGGTCGCTGGCCCCGCTG
GGGCGTTTCGATGCCTTGCTGCAGATGCAGGTGGCCTTGCGCGCCAATGTGCTGTCGGCCTTCGTGCCGGCGCGGCGACG
CATCGGCTACGACCGCAGCCGCTCCAAGGACCTGCACGGCCTGTTCGTCAACGAGCGCATTGCCGACCGCCCTGGCATCC
ATGTGCTCGACGCCATCGGCAGCTTTGCCGAGCCGCTGGGCCTGCGCCAGACCCAGGTGCGCTGGGACCTGCCGGTGCCC
GATGAGGCACACACTTGGGCACGCGCGCAATGGGACGACGATGGCCGCCCGGTACTGATGATTTCGCCGTGCTCCAGCCA
CGCGCGTCGCAACTGGTATCCCGATCGCCATGCCGCGCTGGCCGATCATGCCGCCGCGCAGGGCTGGCGGATCGTGCTGT
GCGGCGGCCGCAGCGACCTGGAACGCAGCACTGCCGATGCCATCGTCGCAGCCGCACGCACGCCGGTGCTGGATCTGGTT
GGCAAGGACACCCTCAAACAGCTGCCCGCACTGCTTGCGCGCGCGAACCTGGTGGTCACGCCGGATTCCGGGCCGATGCA
TATCGCCAACGCCATGGGCACGAAGGTGCTCGGCCTGCATGCCGCCAGCAACCCGCGACGGAGCGGCCCGTATTCGGACG
TGCGCTATTGCGTGGACCGTTACGACGCCGCTGCGCGCAAATTCCTGCAGAAACCGGCCGACCAGCTGAGCTGGGGAACG
AAGATCGAATTCGACGAGGTGATGTCGCTGATCACCGTGGATGACGCGATCGCCGCCTTTGAGCGTTATCGCGCCGACCA
TCGGCGTTAG

Upstream 100 bases:

>100_bases
TCGCGGTCGAACAGAATGGCGCCATAACCGCGACCTTCGCGGTACGGCGCCAGCGCTTCGGTGGCATCGAAAGAAACCAT
CTATCGAGTCTAACAACACC

Downstream 100 bases:

>100_bases
GGATTCGGCACCGCGATTGAAGGCGCATTGCATTCAAAAATGCTGACTGCCAGACACCGTGCAGATGCCGCCAATCAACG
CCGACGTCACAACCGCAGGC

Product: saccharide biosynthesis regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MAVTPASLCLLRLSALGDVTHVVPLVRTLQAGFPETQLHWIIDRAGLKLLDGLPGVQFHAYDKRSGVAGMRALRRSLAPL
GRFDALLQMQVALRANVLSAFVPARRRIGYDRSRSKDLHGLFVNERIADRPGIHVLDAIGSFAEPLGLRQTQVRWDLPVP
DEAHTWARAQWDDDGRPVLMISPCSSHARRNWYPDRHAALADHAAAQGWRIVLCGGRSDLERSTADAIVAAARTPVLDLV
GKDTLKQLPALLARANLVVTPDSGPMHIANAMGTKVLGLHAASNPRRSGPYSDVRYCVDRYDAAARKFLQKPADQLSWGT
KIEFDEVMSLITVDDAIAAFERYRADHRR

Sequences:

>Translated_349_residues
MAVTPASLCLLRLSALGDVTHVVPLVRTLQAGFPETQLHWIIDRAGLKLLDGLPGVQFHAYDKRSGVAGMRALRRSLAPL
GRFDALLQMQVALRANVLSAFVPARRRIGYDRSRSKDLHGLFVNERIADRPGIHVLDAIGSFAEPLGLRQTQVRWDLPVP
DEAHTWARAQWDDDGRPVLMISPCSSHARRNWYPDRHAALADHAAAQGWRIVLCGGRSDLERSTADAIVAAARTPVLDLV
GKDTLKQLPALLARANLVVTPDSGPMHIANAMGTKVLGLHAASNPRRSGPYSDVRYCVDRYDAAARKFLQKPADQLSWGT
KIEFDEVMSLITVDDAIAAFERYRADHRR
>Mature_348_residues
AVTPASLCLLRLSALGDVTHVVPLVRTLQAGFPETQLHWIIDRAGLKLLDGLPGVQFHAYDKRSGVAGMRALRRSLAPLG
RFDALLQMQVALRANVLSAFVPARRRIGYDRSRSKDLHGLFVNERIADRPGIHVLDAIGSFAEPLGLRQTQVRWDLPVPD
EAHTWARAQWDDDGRPVLMISPCSSHARRNWYPDRHAALADHAAAQGWRIVLCGGRSDLERSTADAIVAAARTPVLDLVG
KDTLKQLPALLARANLVVTPDSGPMHIANAMGTKVLGLHAASNPRRSGPYSDVRYCVDRYDAAARKFLQKPADQLSWGTK
IEFDEVMSLITVDDAIAAFERYRADHRR

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790062, Length=341, Percent_Identity=22.5806451612903, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 38543; Mature: 38411

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVTPASLCLLRLSALGDVTHVVPLVRTLQAGFPETQLHWIIDRAGLKLLDGLPGVQFHA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE
YDKRSGVAGMRALRRSLAPLGRFDALLQMQVALRANVLSAFVPARRRIGYDRSRSKDLHG
CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE
LFVNERIADRPGIHVLDAIGSFAEPLGLRQTQVRWDLPVPDEAHTWARAQWDDDGRPVLM
EEECCHHCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEE
ISPCSSHARRNWYPDRHAALADHAAAQGWRIVLCGGRSDLERSTADAIVAAARTPVLDLV
ECCCCHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHH
GKDTLKQLPALLARANLVVTPDSGPMHIANAMGTKVLGLHAASNPRRSGPYSDVRYCVDR
CHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHH
YDAAARKFLQKPADQLSWGTKIEFDEVMSLITVDDAIAAFERYRADHRR
HHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AVTPASLCLLRLSALGDVTHVVPLVRTLQAGFPETQLHWIIDRAGLKLLDGLPGVQFHA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE
YDKRSGVAGMRALRRSLAPLGRFDALLQMQVALRANVLSAFVPARRRIGYDRSRSKDLHG
CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE
LFVNERIADRPGIHVLDAIGSFAEPLGLRQTQVRWDLPVPDEAHTWARAQWDDDGRPVLM
EEECCHHCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEE
ISPCSSHARRNWYPDRHAALADHAAAQGWRIVLCGGRSDLERSTADAIVAAARTPVLDLV
ECCCCHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHH
GKDTLKQLPALLARANLVVTPDSGPMHIANAMGTKVLGLHAASNPRRSGPYSDVRYCVDR
CHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHH
YDAAARKFLQKPADQLSWGTKIEFDEVMSLITVDDAIAAFERYRADHRR
HHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Transferring other glycosyl groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]