| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241829
Identifier: 21241829
GI number: 21241829
Start: 1223694
End: 1224173
Strand: Reverse
Name: 21241829
Synonym: XAC1067
Alternate gene names: NA
Gene position: 1224173-1223694 (Counterclockwise)
Preceding gene: 21241830
Following gene: 21241828
Centisome position: 23.65
GC content: 58.54
Gene sequence:
>480_bases TTGGATTCAGCCGTAATGAGTGGCTGGCTTATCAAATGGGGCGGCGCGTATCGGAAGCCCTGGATCGTGCGCCTGAAATG GGGTGGCACGTGGATCAACCCAGCTGCCGTCCGCCTTCGGTGGGGTGGTGGCTGGGTGACCATCTACACCGCATACACCT CACTCTCAAGCAACGCCACTGGGAGCTCCGCCCAGTACAACAACGGAAACAGTCGCACACCTATGACCCGGCAGTTGGGG GCACGCGCAAGCATCTACACCGCAGGCGGAAACGGAAACCTCACCTATTCCTGGTTCGTGAGCGGCTCCAGCCAAGTGTC GAATGTATCGATCGGCCCATCTGGGCCGCACTGCGATGTAAGCGTCACCGCCACGATGAATCAAACCGGAAGCGTAACCG TGGGGTGCACTGTCAGTGACGGACAGAGCAGCACTACCGCCTACGCGACGAATTACTACGACTACTTCAACACTGTGTAA
Upstream 100 bases:
>100_bases AATTTCGCCGCCAAAGGCAGGGCGGCAGCTGGGGCGCCTGTCAGCAATGCGGCATGGTCATCGTATCGACGACAGATCCT GGCGGCGCCGATGGTGTCCT
Downstream 100 bases:
>100_bases GGAACCCTTGAACAAAGAAGAACTTACGCTCCTCGGCACCCTCGGTGCTGTCGGAGCGCTGATCGGCATCGCAAAATTGC TTGTCTCCGACGAACCCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MDSAVMSGWLIKWGGAYRKPWIVRLKWGGTWINPAAVRLRWGGGWVTIYTAYTSLSSNATGSSAQYNNGNSRTPMTRQLG ARASIYTAGGNGNLTYSWFVSGSSQVSNVSIGPSGPHCDVSVTATMNQTGSVTVGCTVSDGQSSTTAYATNYYDYFNTV
Sequences:
>Translated_159_residues MDSAVMSGWLIKWGGAYRKPWIVRLKWGGTWINPAAVRLRWGGGWVTIYTAYTSLSSNATGSSAQYNNGNSRTPMTRQLG ARASIYTAGGNGNLTYSWFVSGSSQVSNVSIGPSGPHCDVSVTATMNQTGSVTVGCTVSDGQSSTTAYATNYYDYFNTV >Mature_159_residues MDSAVMSGWLIKWGGAYRKPWIVRLKWGGTWINPAAVRLRWGGGWVTIYTAYTSLSSNATGSSAQYNNGNSRTPMTRQLG ARASIYTAGGNGNLTYSWFVSGSSQVSNVSIGPSGPHCDVSVTATMNQTGSVTVGCTVSDGQSSTTAYATNYYDYFNTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16982; Mature: 16982
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSAVMSGWLIKWGGAYRKPWIVRLKWGGTWINPAAVRLRWGGGWVTIYTAYTSLSSNAT CCCCCCCCEEEEECCCCCCCEEEEEEECCEEECCEEEEEEECCCEEEEEEEEEECCCCCC GSSAQYNNGNSRTPMTRQLGARASIYTAGGNGNLTYSWFVSGSSQVSNVSIGPSGPHCDV CCCCEECCCCCCCCHHHHCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCCCE SVTATMNQTGSVTVGCTVSDGQSSTTAYATNYYDYFNTV EEEEEECCCCCEEEEEEECCCCCCCEEEEEEEEEEECCC >Mature Secondary Structure MDSAVMSGWLIKWGGAYRKPWIVRLKWGGTWINPAAVRLRWGGGWVTIYTAYTSLSSNAT CCCCCCCCEEEEECCCCCCCEEEEEEECCEEECCEEEEEEECCCEEEEEEEEEECCCCCC GSSAQYNNGNSRTPMTRQLGARASIYTAGGNGNLTYSWFVSGSSQVSNVSIGPSGPHCDV CCCCEECCCCCCCCHHHHCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCCCE SVTATMNQTGSVTVGCTVSDGQSSTTAYATNYYDYFNTV EEEEEECCCCCEEEEEEECCCCCCCEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA