| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is stf
Identifier: 21241830
GI number: 21241830
Start: 1224158
End: 1226218
Strand: Reverse
Name: stf
Synonym: XAC1068
Alternate gene names: NA
Gene position: 1226218-1224158 (Counterclockwise)
Preceding gene: 21241831
Following gene: 21241829
Centisome position: 23.69
GC content: 59.83
Gene sequence:
>2061_bases GTGGATTCATCCAAGGACTCCGATAACGAGGAACTAATGGCAGAAACACCAGGCTACGTTTCCAATGCAAAGCTCGCGGA ACGCATCTCGGCATTGGTAGATCGCTGGAACACGCGCGAGGGCCAGATGATCGCGCTCCTCACTCAACCCCAAGGAGCTG TAACGGTCACTGACGGCCTCGGCAAGGATCACGTCCTGCCTTCCTTCCTCCAGCTCTCCAAGGATGTCTCAGAGTTGGTG GATGAACTAACGGGCGCCGTTAGCGGCGCTTCCGAGTTTGCCAATATGGCCCGGCTGTACGCTGAGGGCGCGCAGGCCTC CGCCAACGATGCACAAACGAGTGCCGAAGACGCAGCTCAGCAACTCGCAGACGCGACCGACCAAGCAGAAGCGTCAGCTG CAAGTGCAACGGCAAGTGCCGCAAGCGCGTCTGCGTCGGAGTCGAGCAACCAATCGGCCGGACTGCATGATAGCGCCGCT TCCGCAAGCGCAGCCGATGCTGACGCTGACGCGATCCAAGCAGCGAACTCCAAGGCCCAGGCCGTGGCTTCCGCAAGCGC AGCCGCGTCAAGTGAAGCGCAGGCCGCGTCCTACGCACACCAGGCGGAAGATTGGAGCGACCACGCGCAGTCGTGGGCGA ACGCCCCGGCTGGAACTGAGATTGAGCCAGGGGCCTTTTCAGCTAAGCACTGGTCCGAGCAGGCCAAAGCATCCCTTACG GGCACGCTGGTCTATCGAGGCGGCTGGGACGCCGGTACCGGGTCGTTCCCATCGGGCGGTAACACTGGCGCGTTTTACAA AGTCACTACGGGCGGCTCCATTGGCGGTCGCCAGTACAACCCCGGCGACCAGATCGTCCATAACGGCTCCGGCTGGGACC ACATCGACAACACCGAGCAGGTCACCTCAGTGGCAGGCAAGTCCGGAGCGGTCCAGCTGGTACCGAGCGACATCTCCGGC CTGGGCACTTTAGCTACACGCGACAGCGTGGATTTCAGCAGTCATGTCACAAACAAGCCAGCTTCATACCCTCCGAGCGG ACACATGCACACGAAGGGCGACGTTGGGCTTTCTAACGTGGACAACACATCCGACGCAAATAAGCCGGTGAGCAACGCTC AGCAGGCAGCGCTGGACACGAAAGCACCTATCGACAAGCCCTCCTTTACGGGCGGTGTCACCGTGCGGAATAGCTCTCTC CGGTTAAGCGGCTGGGGCGGAATCGCAAACGATGGCGTGGTTTATTTCGGAGCAAGCGATAGCTGGCTCTTCAAGCAGGG AGACGCCTTCAGGTTCCAAATTGAAGGCAAGTTCAACGCATCCCTGGACTCCTCGGGAACCGTGTGGACATCTGGCAACT TCAATCCTGCCTCCAAGGTGGATATGGGCGGGCAGCCGCGCTTCGCCGGCGTTTTTGTCGGCGCCAACAACGATCAATAC TTTTACGCCGAAGATGCCAATCAGAGCGTCGTACTGCGCTTCGGCTATGGCACGTCTTTCAAGTATGCCAAGTGGAATGG CGTCACTGGCGCCTTCACCGCGCCCCATTTAATTGCGGGTGGCTCCGGCAACGGAGCTTACGTACAGATTGGCGACGACG TGCGCCTAGTTGACATCGGTAGAAGCCACACCACGGCTATTCAAAGCACGGCTAACGGGAACATCGGATTTCTGCAGTTC GGAACGGGACCGACAATCGGTTGGGACGGCACCACCCTGCAGGCGGCGGGACAGGAACTCAAGCATGCCGGCAACACCGG ATACTACGGCGTGAGTGGGCGGCAGCATAGTGACTGGAACACTTGTGTCACTCAGGGAATCTGGATGGCTGTAGGCGCTA CCAACTCTCCCGACAACTCAGATTGGTGGCTCGGCCACGTAACCGTCCACAACGGTGATTGGGTGCAGCAGGAGGTCATC AACTTCACATCAAATCCGCCCAAGCAATTTCGCCGCCAAAGGCAGGGCGGCAGCTGGGGCGCCTGTCAGCAATGCGGCAT GGTCATCGTATCGACGACAGATCCTGGCGGCGCCGATGGTGTCCTTTGGATTCAGCCGTAA
Upstream 100 bases:
>100_bases GCGCTCAATTACGTCGGAGACCCGACAACGGCGGAAGCCACCTACCGTGTGGCCATCGCCGATTCTTCGCGCGGTGACCG CCTGATCATCACAAAGGTCC
Downstream 100 bases:
>100_bases TGAGTGGCTGGCTTATCAAATGGGGCGGCGCGTATCGGAAGCCCTGGATCGTGCGCCTGAAATGGGGTGGCACGTGGATC AACCCAGCTGCCGTCCGCCT
Product: phage-related tail protein
Products: NA
Alternate protein names: Gp32 Bacteriophage Protein; Phage Tail Protein
Number of amino acids: Translated: 686; Mature: 686
Protein sequence:
>686_residues MDSSKDSDNEELMAETPGYVSNAKLAERISALVDRWNTREGQMIALLTQPQGAVTVTDGLGKDHVLPSFLQLSKDVSELV DELTGAVSGASEFANMARLYAEGAQASANDAQTSAEDAAQQLADATDQAEASAASATASAASASASESSNQSAGLHDSAA SASAADADADAIQAANSKAQAVASASAAASSEAQAASYAHQAEDWSDHAQSWANAPAGTEIEPGAFSAKHWSEQAKASLT GTLVYRGGWDAGTGSFPSGGNTGAFYKVTTGGSIGGRQYNPGDQIVHNGSGWDHIDNTEQVTSVAGKSGAVQLVPSDISG LGTLATRDSVDFSSHVTNKPASYPPSGHMHTKGDVGLSNVDNTSDANKPVSNAQQAALDTKAPIDKPSFTGGVTVRNSSL RLSGWGGIANDGVVYFGASDSWLFKQGDAFRFQIEGKFNASLDSSGTVWTSGNFNPASKVDMGGQPRFAGVFVGANNDQY FYAEDANQSVVLRFGYGTSFKYAKWNGVTGAFTAPHLIAGGSGNGAYVQIGDDVRLVDIGRSHTTAIQSTANGNIGFLQF GTGPTIGWDGTTLQAAGQELKHAGNTGYYGVSGRQHSDWNTCVTQGIWMAVGATNSPDNSDWWLGHVTVHNGDWVQQEVI NFTSNPPKQFRRQRQGGSWGACQQCGMVIVSTTDPGGADGVLWIQP
Sequences:
>Translated_686_residues MDSSKDSDNEELMAETPGYVSNAKLAERISALVDRWNTREGQMIALLTQPQGAVTVTDGLGKDHVLPSFLQLSKDVSELV DELTGAVSGASEFANMARLYAEGAQASANDAQTSAEDAAQQLADATDQAEASAASATASAASASASESSNQSAGLHDSAA SASAADADADAIQAANSKAQAVASASAAASSEAQAASYAHQAEDWSDHAQSWANAPAGTEIEPGAFSAKHWSEQAKASLT GTLVYRGGWDAGTGSFPSGGNTGAFYKVTTGGSIGGRQYNPGDQIVHNGSGWDHIDNTEQVTSVAGKSGAVQLVPSDISG LGTLATRDSVDFSSHVTNKPASYPPSGHMHTKGDVGLSNVDNTSDANKPVSNAQQAALDTKAPIDKPSFTGGVTVRNSSL RLSGWGGIANDGVVYFGASDSWLFKQGDAFRFQIEGKFNASLDSSGTVWTSGNFNPASKVDMGGQPRFAGVFVGANNDQY FYAEDANQSVVLRFGYGTSFKYAKWNGVTGAFTAPHLIAGGSGNGAYVQIGDDVRLVDIGRSHTTAIQSTANGNIGFLQF GTGPTIGWDGTTLQAAGQELKHAGNTGYYGVSGRQHSDWNTCVTQGIWMAVGATNSPDNSDWWLGHVTVHNGDWVQQEVI NFTSNPPKQFRRQRQGGSWGACQQCGMVIVSTTDPGGADGVLWIQP >Mature_686_residues MDSSKDSDNEELMAETPGYVSNAKLAERISALVDRWNTREGQMIALLTQPQGAVTVTDGLGKDHVLPSFLQLSKDVSELV DELTGAVSGASEFANMARLYAEGAQASANDAQTSAEDAAQQLADATDQAEASAASATASAASASASESSNQSAGLHDSAA SASAADADADAIQAANSKAQAVASASAAASSEAQAASYAHQAEDWSDHAQSWANAPAGTEIEPGAFSAKHWSEQAKASLT GTLVYRGGWDAGTGSFPSGGNTGAFYKVTTGGSIGGRQYNPGDQIVHNGSGWDHIDNTEQVTSVAGKSGAVQLVPSDISG LGTLATRDSVDFSSHVTNKPASYPPSGHMHTKGDVGLSNVDNTSDANKPVSNAQQAALDTKAPIDKPSFTGGVTVRNSSL RLSGWGGIANDGVVYFGASDSWLFKQGDAFRFQIEGKFNASLDSSGTVWTSGNFNPASKVDMGGQPRFAGVFVGANNDQY FYAEDANQSVVLRFGYGTSFKYAKWNGVTGAFTAPHLIAGGSGNGAYVQIGDDVRLVDIGRSHTTAIQSTANGNIGFLQF GTGPTIGWDGTTLQAAGQELKHAGNTGYYGVSGRQHSDWNTCVTQGIWMAVGATNSPDNSDWWLGHVTVHNGDWVQQEVI NFTSNPPKQFRRQRQGGSWGACQQCGMVIVSTTDPGGADGVLWIQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71214; Mature: 71214
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSSKDSDNEELMAETPGYVSNAKLAERISALVDRWNTREGQMIALLTQPQGAVTVTDGL CCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEECCC GKDHVLPSFLQLSKDVSELVDELTGAVSGASEFANMARLYAEGAQASANDAQTSAEDAAQ CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH QLADATDQAEASAASATASAASASASESSNQSAGLHDSAASASAADADADAIQAANSKAQ HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHH AVASASAAASSEAQAASYAHQAEDWSDHAQSWANAPAGTEIEPGAFSAKHWSEQAKASLT HHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCEE GTLVYRGGWDAGTGSFPSGGNTGAFYKVTTGGSIGGRQYNPGDQIVHNGSGWDHIDNTEQ EEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHEEECCCCCCCCCCHHH VTSVAGKSGAVQLVPSDISGLGTLATRDSVDFSSHVTNKPASYPPSGHMHTKGDVGLSNV HHHHCCCCCEEEECCCCCCCCCCEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC DNTSDANKPVSNAQQAALDTKAPIDKPSFTGGVTVRNSSLRLSGWGGIANDGVVYFGASD CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEECCEEEEEECCCCCCCCEEEECCCC SWLFKQGDAFRFQIEGKFNASLDSSGTVWTSGNFNPASKVDMGGQPRFAGVFVGANNDQY CEEEECCCEEEEEEECEECCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCE FYAEDANQSVVLRFGYGTSFKYAKWNGVTGAFTAPHLIAGGSGNGAYVQIGDDVRLVDIG EEEECCCCEEEEEEECCCCEEEEEECCCCCCCCCCEEEECCCCCCEEEEECCCEEEEECC RSHTTAIQSTANGNIGFLQFGTGPTIGWDGTTLQAAGQELKHAGNTGYYGVSGRQHSDWN CCCCCEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCHH TCVTQGIWMAVGATNSPDNSDWWLGHVTVHNGDWVQQEVINFTSNPPKQFRRQRQGGSWG HHHHCCEEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHCCCCCHHHHHHHHCCCCCC ACQQCGMVIVSTTDPGGADGVLWIQP CHHHCCEEEEECCCCCCCCCEEEEEC >Mature Secondary Structure MDSSKDSDNEELMAETPGYVSNAKLAERISALVDRWNTREGQMIALLTQPQGAVTVTDGL CCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEECCC GKDHVLPSFLQLSKDVSELVDELTGAVSGASEFANMARLYAEGAQASANDAQTSAEDAAQ CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH QLADATDQAEASAASATASAASASASESSNQSAGLHDSAASASAADADADAIQAANSKAQ HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHH AVASASAAASSEAQAASYAHQAEDWSDHAQSWANAPAGTEIEPGAFSAKHWSEQAKASLT HHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCEE GTLVYRGGWDAGTGSFPSGGNTGAFYKVTTGGSIGGRQYNPGDQIVHNGSGWDHIDNTEQ EEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHEEECCCCCCCCCCHHH VTSVAGKSGAVQLVPSDISGLGTLATRDSVDFSSHVTNKPASYPPSGHMHTKGDVGLSNV HHHHCCCCCEEEECCCCCCCCCCEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC DNTSDANKPVSNAQQAALDTKAPIDKPSFTGGVTVRNSSLRLSGWGGIANDGVVYFGASD CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEECCEEEEEECCCCCCCCEEEECCCC SWLFKQGDAFRFQIEGKFNASLDSSGTVWTSGNFNPASKVDMGGQPRFAGVFVGANNDQY CEEEECCCEEEEEEECEECCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCE FYAEDANQSVVLRFGYGTSFKYAKWNGVTGAFTAPHLIAGGSGNGAYVQIGDDVRLVDIG EEEECCCCEEEEEEECCCCEEEEEECCCCCCCCCCEEEECCCCCCEEEEECCCEEEEECC RSHTTAIQSTANGNIGFLQFGTGPTIGWDGTTLQAAGQELKHAGNTGYYGVSGRQHSDWN CCCCCEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCHH TCVTQGIWMAVGATNSPDNSDWWLGHVTVHNGDWVQQEVINFTSNPPKQFRRQRQGGSWG HHHHCCEEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHCCCCCHHHHHHHHCCCCCC ACQQCGMVIVSTTDPGGADGVLWIQP CHHHCCEEEEECCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA