| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is folC [H]
Identifier: 21241794
GI number: 21241794
Start: 1186466
End: 1187764
Strand: Direct
Name: folC [H]
Synonym: XAC1029
Alternate gene names: 21241794
Gene position: 1186466-1187764 (Clockwise)
Preceding gene: 21241793
Following gene: 21241795
Centisome position: 22.92
GC content: 68.28
Gene sequence:
>1299_bases ATGAACGCAACCGACTCCCTCTCCGCCTGGCTCGCCTATATCGAGCAGCAGCATCCCAGCGCTATTGCCATGGGCCTGGA GCGCGTGCGCGAGGTTGCGGTGCGGTTGCAGATCGCCGCGCCGGCCAAGCACGTCATCGTCGTAGGCGGGACCAATGGCA AGGGTTCGACGGTGGCCTTCATCGAGGCGATCGGGCGTGCCGCCGGCTGGAAGGTGGGTGCCTACACCTCGCCGCACCTG CTGCGCTACAACGAGCGCGTGCGCATCGATGGCCAAGAGGCCAGCGACGCCCAGCTGGTCGACGCGTTTGCGGCGGTCGA AGCAGCACGCGGCGACACCGCGTTGACCTATTTCGAGTTCGGTACGCTGGCGGCGCTGTGGTTGTTTCAGCAGTCGGCGC TGGAGTTGGCGGTGCTGGAAATCGGCCTGGGCGGGCGTCTGGATGCGGTCAACATCGTCGATTCGGATGTGGCGGTGATT ACCACTGTCGATCTCGACCACACCGATTGGCTGGGCGACGACCGCGAGGCCATCGGCGCCGAGAAGGCCGGCATCATCCG CGCCTGGAAGCCGGTGGTGCTGGGCGAGATCGACCCGCCGTCCAGCGTGCTGCGTCGCGCCTACCAGTTGGGCGCCAATG CCATCCGTGCCGGCAGCGATTATTTCTTCGAGCCGATCGACACACAGCACGCCGAGAGCCCGCAATCCGATGCGCCGCGC TGGCGCTGGCGCGATGTGGCGGTGACGCTGGAATTGCCGATGCCGGCATTGCACGCGCCGGTGCAGCTGGCCAACGCCGC TGCCGCGATCGCCGCATTGCAGGCATTGCCGGTGGAGGTGCCCGACGCGGCCTGGGCGCAAGGCATCGGTAACGCGCAAG TGGCCGGACGACTGCAGCGGCTTGAGGTCGATGGCGTGCAGGTATTGCTGGATGTCGGCCACAACCCGCAGGCCGCGCGG GCGCTGGCTGCCGCGCTCGATGCGCAGGCGCATGCCGGCAGCACCTATGCGATCTACGCTGCATTGGCCGACAAGGATGT GTTGGGCGTGGTGGAGGCAGTCGCTGCGCAGATCGACCGCTGGGCGCTGGCGGGGCTGGAAGGCGCTCGCGGCCAATCGG CGCAGGCGTTGCAGGCCCGCCTGCAAGGCAGTGCCGCCGCGCAGGCGCCGTGTCATCGCGATGTTGCCAGTGCGGTGCGT GCGGTCCTGGACGCGGCCAGCCCCGGCGACCGTGTGCTGGTCTTCGGCTCGTTTCACACCGTGGCCGACGCGCTTGGCGC ACTTCGTTCAGCCCGCTGA
Upstream 100 bases:
>100_bases GCTGCTTCGGTCTGGCCAAGCAATTGCGAGAGCACCGACGTGGCGTGCGACGCGCAAGCGCAAATGGCGATAATGTGCCC CTCTCTGCGCAGCCCTCCCC
Downstream 100 bases:
>100_bases GGTCGTCGGGGTGGCGCCGGCCTTATAATCGCCGCGGCACCCCGCCACGCCGCCTCTCGTCTCTTCCGTGGATACTGCTC TGAAACAGCGACTGATTGGC
Product: dihydrofolate synthase
Products: NA
Alternate protein names: Folylpoly-gamma-glutamate synthetase; FPGS; Tetrahydrofolylpolyglutamate synthase; Tetrahydrofolate synthase [H]
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MNATDSLSAWLAYIEQQHPSAIAMGLERVREVAVRLQIAAPAKHVIVVGGTNGKGSTVAFIEAIGRAAGWKVGAYTSPHL LRYNERVRIDGQEASDAQLVDAFAAVEAARGDTALTYFEFGTLAALWLFQQSALELAVLEIGLGGRLDAVNIVDSDVAVI TTVDLDHTDWLGDDREAIGAEKAGIIRAWKPVVLGEIDPPSSVLRRAYQLGANAIRAGSDYFFEPIDTQHAESPQSDAPR WRWRDVAVTLELPMPALHAPVQLANAAAAIAALQALPVEVPDAAWAQGIGNAQVAGRLQRLEVDGVQVLLDVGHNPQAAR ALAAALDAQAHAGSTYAIYAALADKDVLGVVEAVAAQIDRWALAGLEGARGQSAQALQARLQGSAAAQAPCHRDVASAVR AVLDAASPGDRVLVFGSFHTVADALGALRSAR
Sequences:
>Translated_432_residues MNATDSLSAWLAYIEQQHPSAIAMGLERVREVAVRLQIAAPAKHVIVVGGTNGKGSTVAFIEAIGRAAGWKVGAYTSPHL LRYNERVRIDGQEASDAQLVDAFAAVEAARGDTALTYFEFGTLAALWLFQQSALELAVLEIGLGGRLDAVNIVDSDVAVI TTVDLDHTDWLGDDREAIGAEKAGIIRAWKPVVLGEIDPPSSVLRRAYQLGANAIRAGSDYFFEPIDTQHAESPQSDAPR WRWRDVAVTLELPMPALHAPVQLANAAAAIAALQALPVEVPDAAWAQGIGNAQVAGRLQRLEVDGVQVLLDVGHNPQAAR ALAAALDAQAHAGSTYAIYAALADKDVLGVVEAVAAQIDRWALAGLEGARGQSAQALQARLQGSAAAQAPCHRDVASAVR AVLDAASPGDRVLVFGSFHTVADALGALRSAR >Mature_432_residues MNATDSLSAWLAYIEQQHPSAIAMGLERVREVAVRLQIAAPAKHVIVVGGTNGKGSTVAFIEAIGRAAGWKVGAYTSPHL LRYNERVRIDGQEASDAQLVDAFAAVEAARGDTALTYFEFGTLAALWLFQQSALELAVLEIGLGGRLDAVNIVDSDVAVI TTVDLDHTDWLGDDREAIGAEKAGIIRAWKPVVLGEIDPPSSVLRRAYQLGANAIRAGSDYFFEPIDTQHAESPQSDAPR WRWRDVAVTLELPMPALHAPVQLANAAAAIAALQALPVEVPDAAWAQGIGNAQVAGRLQRLEVDGVQVLLDVGHNPQAAR ALAAALDAQAHAGSTYAIYAALADKDVLGVVEAVAAQIDRWALAGLEGARGQSAQALQARLQGSAAAQAPCHRDVASAVR AVLDAASPGDRVLVFGSFHTVADALGALRSAR
Specific function: Conversion of folates to polyglutamate derivatives [H]
COG id: COG0285
COG function: function code H; Folylpolyglutamate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the folylpolyglutamate synthase family [H]
Homologues:
Organism=Homo sapiens, GI66932990, Length=179, Percent_Identity=37.9888268156425, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI66932984, Length=179, Percent_Identity=37.9888268156425, Blast_Score=117, Evalue=1e-26, Organism=Escherichia coli, GI1788654, Length=432, Percent_Identity=44.6759259259259, Blast_Score=325, Evalue=3e-90, Organism=Caenorhabditis elegans, GI17553148, Length=199, Percent_Identity=34.6733668341709, Blast_Score=124, Evalue=8e-29, Organism=Caenorhabditis elegans, GI71984923, Length=199, Percent_Identity=34.6733668341709, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17553150, Length=199, Percent_Identity=34.6733668341709, Blast_Score=124, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6323760, Length=371, Percent_Identity=25.3369272237197, Blast_Score=110, Evalue=4e-25, Organism=Saccharomyces cerevisiae, GI6324815, Length=222, Percent_Identity=31.0810810810811, Blast_Score=99, Evalue=2e-21, Organism=Drosophila melanogaster, GI24641571, Length=279, Percent_Identity=31.1827956989247, Blast_Score=108, Evalue=6e-24, Organism=Drosophila melanogaster, GI24581568, Length=146, Percent_Identity=36.986301369863, Blast_Score=95, Evalue=8e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018109 - InterPro: IPR001645 - InterPro: IPR004101 - InterPro: IPR013221 [H]
Pfam domain/function: PF08245 Mur_ligase_M [H]
EC number: =6.3.2.17 [H]
Molecular weight: Translated: 45411; Mature: 45411
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNATDSLSAWLAYIEQQHPSAIAMGLERVREVAVRLQIAAPAKHVIVVGGTNGKGSTVAF CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEECCCCEEEEEECCCCCCCHHHH IEAIGRAAGWKVGAYTSPHLLRYNERVRIDGQEASDAQLVDAFAAVEAARGDTALTYFEF HHHHHHHCCCEECCCCCCCEEEECCEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEHH GTLAALWLFQQSALELAVLEIGLGGRLDAVNIVDSDVAVITTVDLDHTDWLGDDREAIGA HHHHHHHHHHHHHHEEEEEEECCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCHHHHCC EKAGIIRAWKPVVLGEIDPPSSVLRRAYQLGANAIRAGSDYFFEPIDTQHAESPQSDAPR CCCCHHEECCCEEEECCCCHHHHHHHHHHHCCHHEECCCCCCCCCCCCCCCCCCCCCCCC WRWRDVAVTLELPMPALHAPVQLANAAAAIAALQALPVEVPDAAWAQGIGNAQVAGRLQR CEEEEEEEEEECCCCHHHCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHH LEVDGVQVLLDVGHNPQAARALAAALDAQAHAGSTYAIYAALADKDVLGVVEAVAAQIDR EECCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHH WALAGLEGARGQSAQALQARLQGSAAAQAPCHRDVASAVRAVLDAASPGDRVLVFGSFHT HHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECHHH VADALGALRSAR HHHHHHHHHCCC >Mature Secondary Structure MNATDSLSAWLAYIEQQHPSAIAMGLERVREVAVRLQIAAPAKHVIVVGGTNGKGSTVAF CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEECCCCEEEEEECCCCCCCHHHH IEAIGRAAGWKVGAYTSPHLLRYNERVRIDGQEASDAQLVDAFAAVEAARGDTALTYFEF HHHHHHHCCCEECCCCCCCEEEECCEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEHH GTLAALWLFQQSALELAVLEIGLGGRLDAVNIVDSDVAVITTVDLDHTDWLGDDREAIGA HHHHHHHHHHHHHHEEEEEEECCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCHHHHCC EKAGIIRAWKPVVLGEIDPPSSVLRRAYQLGANAIRAGSDYFFEPIDTQHAESPQSDAPR CCCCHHEECCCEEEECCCCHHHHHHHHHHHCCHHEECCCCCCCCCCCCCCCCCCCCCCCC WRWRDVAVTLELPMPALHAPVQLANAAAAIAALQALPVEVPDAAWAQGIGNAQVAGRLQR CEEEEEEEEEECCCCHHHCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHH LEVDGVQVLLDVGHNPQAARALAAALDAQAHAGSTYAIYAALADKDVLGVVEAVAAQIDR EECCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHH WALAGLEGARGQSAQALQARLQGSAAAQAPCHRDVASAVRAVLDAASPGDRVLVFGSFHT HHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECHHH VADALGALRSAR HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]