| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21241795
Identifier: 21241795
GI number: 21241795
Start: 1187832
End: 1188899
Strand: Direct
Name: 21241795
Synonym: XAC1030
Alternate gene names: NA
Gene position: 1187832-1188899 (Clockwise)
Preceding gene: 21241794
Following gene: 21241796
Centisome position: 22.95
GC content: 70.32
Gene sequence:
>1068_bases GTGGATACTGCTCTGAAACAGCGACTGATTGGCGCCATCGTTCTGGTGGCGCTTGCCGTGATCTTCCTGCCGATGCTGGT CAAGGGCCCCGCGCCGTCGAGCGGTGTGGCCGATGTGCCGCTCGAGGCGCCCGCAGCGCCCGCCAATGGCGAGTTCGAAA CCCGCGAATTGCCGCTGGTCACCCCGGGCAATGCGCCGGCCGGTGGCGCGTTAGGCATGGCCGGCGCGCCGGCGCCGGTG CAGAACAACCCCGACGCCGCCGATCTGGCCGCCCCGTCCAGCACGCCCTCAGCTCCGGAAGTGGCTGCCGGCAATTACGC AGTGAATTTCGGTGCGTATGCCACCAGCGCCGACGCCGATGCGGTGATTGCGCGGCTCAAGCAGGCGCAGTTGCCCGGCT TCAGCGAAAAGACCCAGATCAGTGGTCGCCCGGCCTGGCGCGTGCGCGTGGGGCCGTATGCCGACCAGGCCCAGGCCGAA TCGGCCCGCCTGCAGGCAGTGAAGGTGCGCAGCGACGTCAACGCCCAGGTGGTGACGTTGGACGCCAATGCCGGCGCGCC ATCGCCTGTGGCCAGCACCCCTGCGCCCGCACCGGCCCCCAAGCCGAGCAGCAGCGTCGCCGCCGCCAGCACCACCGCAC CGACCAAGACCGAGAGCCTGCCGCCGGAACCCGCCAAAGCGGTGGCCGCCGCGCCCAAGCCGGCCGAAGTGGCCAAGCCC GCGCCCACCAAGCCTGAGGTCACCAAGCCCATCCCCGCCAAGCCCGAGCTTGCTGCCAAGCCTGAACCCGCCAAGCCTGT GGTCACCGCGCCTGTGGCGCCTGCGGCCAGCGCGGTCGGGTTTGCAGTGCAGCTGGGCGCGTTCGGTCGTGCCGAAGATG CCGATGCCTTGCGCGACCGCGTGCGCGCCGCCGGCTTCAGCGCCTTCGTCGAGCAGGTGCGGACCGACAAGGGCGCACTC AATCGTGTGCGTGTTGGCCCGGTTGCCAATCGCGCCGATGCCGAACAGTTGCGCGCGCAGGTGGCAGCCAAGGTCGGTAT CTCCGGCATGGTGCGTCCGCATCCGTAA
Upstream 100 bases:
>100_bases GACGCGCTTGGCGCACTTCGTTCAGCCCGCTGAGGTCGTCGGGGTGGCGCCGGCCTTATAATCGCCGCGGCACCCCGCCA CGCCGCCTCTCGTCTCTTCC
Downstream 100 bases:
>100_bases CCGCCATGCCGGCCGTAAGCAAACGCGGCCGCCGCGCACTTGGCAGCCGCTCGTACACTGCACTGCCGGCGGACCGCCAC GTGTCTGTTGACTGCCTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MDTALKQRLIGAIVLVALAVIFLPMLVKGPAPSSGVADVPLEAPAAPANGEFETRELPLVTPGNAPAGGALGMAGAPAPV QNNPDAADLAAPSSTPSAPEVAAGNYAVNFGAYATSADADAVIARLKQAQLPGFSEKTQISGRPAWRVRVGPYADQAQAE SARLQAVKVRSDVNAQVVTLDANAGAPSPVASTPAPAPAPKPSSSVAAASTTAPTKTESLPPEPAKAVAAAPKPAEVAKP APTKPEVTKPIPAKPELAAKPEPAKPVVTAPVAPAASAVGFAVQLGAFGRAEDADALRDRVRAAGFSAFVEQVRTDKGAL NRVRVGPVANRADAEQLRAQVAAKVGISGMVRPHP
Sequences:
>Translated_355_residues MDTALKQRLIGAIVLVALAVIFLPMLVKGPAPSSGVADVPLEAPAAPANGEFETRELPLVTPGNAPAGGALGMAGAPAPV QNNPDAADLAAPSSTPSAPEVAAGNYAVNFGAYATSADADAVIARLKQAQLPGFSEKTQISGRPAWRVRVGPYADQAQAE SARLQAVKVRSDVNAQVVTLDANAGAPSPVASTPAPAPAPKPSSSVAAASTTAPTKTESLPPEPAKAVAAAPKPAEVAKP APTKPEVTKPIPAKPELAAKPEPAKPVVTAPVAPAASAVGFAVQLGAFGRAEDADALRDRVRAAGFSAFVEQVRTDKGAL NRVRVGPVANRADAEQLRAQVAAKVGISGMVRPHP >Mature_355_residues MDTALKQRLIGAIVLVALAVIFLPMLVKGPAPSSGVADVPLEAPAAPANGEFETRELPLVTPGNAPAGGALGMAGAPAPV QNNPDAADLAAPSSTPSAPEVAAGNYAVNFGAYATSADADAVIARLKQAQLPGFSEKTQISGRPAWRVRVGPYADQAQAE SARLQAVKVRSDVNAQVVTLDANAGAPSPVASTPAPAPAPKPSSSVAAASTTAPTKTESLPPEPAKAVAAAPKPAEVAKP APTKPEVTKPIPAKPELAAKPEPAKPVVTAPVAPAASAVGFAVQLGAFGRAEDADALRDRVRAAGFSAFVEQVRTDKGAL NRVRVGPVANRADAEQLRAQVAAKVGISGMVRPHP
Specific function: Unknown
COG id: COG3147
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35643; Mature: 35643
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTALKQRLIGAIVLVALAVIFLPMLVKGPAPSSGVADVPLEAPAAPANGEFETRELPLV CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE TPGNAPAGGALGMAGAPAPVQNNPDAADLAAPSSTPSAPEVAAGNYAVNFGAYATSADAD CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCHH AVIARLKQAQLPGFSEKTQISGRPAWRVRVGPYADQAQAESARLQAVKVRSDVNAQVVTL HHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHEEEEECCCCCEEEEEE DANAGAPSPVASTPAPAPAPKPSSSVAAASTTAPTKTESLPPEPAKAVAAAPKPAEVAKP ECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHCCCCCHHHCCC APTKPEVTKPIPAKPELAAKPEPAKPVVTAPVAPAASAVGFAVQLGAFGRAEDADALRDR CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHH VRAAGFSAFVEQVRTDKGALNRVRVGPVANRADAEQLRAQVAAKVGISGMVRPHP HHHHHHHHHHHHHHHCHHHHCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MDTALKQRLIGAIVLVALAVIFLPMLVKGPAPSSGVADVPLEAPAAPANGEFETRELPLV CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE TPGNAPAGGALGMAGAPAPVQNNPDAADLAAPSSTPSAPEVAAGNYAVNFGAYATSADAD CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCHH AVIARLKQAQLPGFSEKTQISGRPAWRVRVGPYADQAQAESARLQAVKVRSDVNAQVVTL HHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHEEEEECCCCCEEEEEE DANAGAPSPVASTPAPAPAPKPSSSVAAASTTAPTKTESLPPEPAKAVAAAPKPAEVAKP ECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHCCCCCHHHCCC APTKPEVTKPIPAKPELAAKPEPAKPVVTAPVAPAASAVGFAVQLGAFGRAEDADALRDR CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHH VRAAGFSAFVEQVRTDKGALNRVRVGPVANRADAEQLRAQVAAKVGISGMVRPHP HHHHHHHHHHHHHHHCHHHHCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA