| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is cysW [H]
Identifier: 21241784
GI number: 21241784
Start: 1174782
End: 1175735
Strand: Direct
Name: cysW [H]
Synonym: XAC1019
Alternate gene names: 21241784
Gene position: 1174782-1175735 (Clockwise)
Preceding gene: 21241783
Following gene: 21241785
Centisome position: 22.7
GC content: 62.68
Gene sequence:
>954_bases ATGAACGATGCTGTTTCATCGCTGCCTTCCATGTTGCCGACCCATGCCATGACCAAGCAGGCGCGTCGCATCAGCGATTC GGCCACCAATGAGCCGCGTTGGGTGCAATGGCTGATGATCCTGGGCGCCGTGCTCTTTCTACTGGCGTTCTTGCTGCTGC CGCTGGTGCTGGTGTTCGCCGAGGCGTTGCGTGGCGGTTGGGAAACCTTCCTGCACGCGGTAGTCGACCCGGACGCGTTG TCGGCGATCAAGCTGACCTTGCTGGTGACTGCGATCGTGCTGCCGTTGAATCTGGTCTTCGGCGTGGCCGCGGCGTGGGC CATCAGCAAGCATCAGTTCCGGGGCAAACGCCTGCTGGTCAGCCTGATCGACCTGCCATTCTCGGTGTCGCCGGTGGTGG CGGGCTTGATCTTCGTGCTGATCTTCGGCCGCAACGGCTGGGCCTGGCCACTGATCGACGAAGGCTGGCATGTGCAGCTG CCGGCGCTGGGCGACCTTGTGATCCAGTTGCCGCGGATCGTGTTCGCGTTGCCGGGCATCGTATTGGCGACCACGTTCGT AACCTTTCCCTTCATTGCGCGCGAATTGATGCCGTTGATGGAGCAGCAGGGCAGCGACGAAGAACTGGCGGCACTGAGCC TGGGCGCGAACGGCTGGCAGATGTTCTGGCGGGTGACGCTGCCCAATATCCGTTGGGGCCTGTTGTACGGCGTGCTGTTG TGCGCGGCGCGTGCGATGGGCGAATTCGGGGCGGTGTCGGTGGTGTCCGGGCATATCCGTGGACGCACCAATACGCTGCC GCTGCATGTGGAAATTCTCTACAACGAATACGCCTACAGCGCCGCATTTGCCTGCGCGTCGCTGCTGGCATTGACCGCGC TGCTGACGTTGGCGCTGAAGACGTATCTGGAATGGCGACACGGCGATTCGCTGGCCGCCAACCACCGCCATTGA
Upstream 100 bases:
>100_bases CGACTGCCATTGCCGCGGCCATGCTGTTGCTGTCGTTCGTGATCTTGTTGGTGGTCAATACGCTGCAGGCACGGCTGCTG CGCTATCAACGCAGGCCCGT
Downstream 100 bases:
>100_bases GGTGACCATGGGCATCCGCATTCACCGCCTGCGCAAGCAGTTCGAGACTTTTACCGCGCTGGACAACATCGACCTGGAAG TGCGCCAGGGCGAGTTGCTG
Product: ABC transporter sulfate permease
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MNDAVSSLPSMLPTHAMTKQARRISDSATNEPRWVQWLMILGAVLFLLAFLLLPLVLVFAEALRGGWETFLHAVVDPDAL SAIKLTLLVTAIVLPLNLVFGVAAAWAISKHQFRGKRLLVSLIDLPFSVSPVVAGLIFVLIFGRNGWAWPLIDEGWHVQL PALGDLVIQLPRIVFALPGIVLATTFVTFPFIARELMPLMEQQGSDEELAALSLGANGWQMFWRVTLPNIRWGLLYGVLL CAARAMGEFGAVSVVSGHIRGRTNTLPLHVEILYNEYAYSAAFACASLLALTALLTLALKTYLEWRHGDSLAANHRH
Sequences:
>Translated_317_residues MNDAVSSLPSMLPTHAMTKQARRISDSATNEPRWVQWLMILGAVLFLLAFLLLPLVLVFAEALRGGWETFLHAVVDPDAL SAIKLTLLVTAIVLPLNLVFGVAAAWAISKHQFRGKRLLVSLIDLPFSVSPVVAGLIFVLIFGRNGWAWPLIDEGWHVQL PALGDLVIQLPRIVFALPGIVLATTFVTFPFIARELMPLMEQQGSDEELAALSLGANGWQMFWRVTLPNIRWGLLYGVLL CAARAMGEFGAVSVVSGHIRGRTNTLPLHVEILYNEYAYSAAFACASLLALTALLTLALKTYLEWRHGDSLAANHRH >Mature_317_residues MNDAVSSLPSMLPTHAMTKQARRISDSATNEPRWVQWLMILGAVLFLLAFLLLPLVLVFAEALRGGWETFLHAVVDPDAL SAIKLTLLVTAIVLPLNLVFGVAAAWAISKHQFRGKRLLVSLIDLPFSVSPVVAGLIFVLIFGRNGWAWPLIDEGWHVQL PALGDLVIQLPRIVFALPGIVLATTFVTFPFIARELMPLMEQQGSDEELAALSLGANGWQMFWRVTLPNIRWGLLYGVLL CAARAMGEFGAVSVVSGHIRGRTNTLPLHVEILYNEYAYSAAFACASLLALTALLTLALKTYLEWRHGDSLAANHRH
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4208
COG function: function code P; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=305, Percent_Identity=47.5409836065574, Blast_Score=255, Evalue=2e-69, Organism=Escherichia coli, GI1788764, Length=242, Percent_Identity=33.4710743801653, Blast_Score=130, Evalue=1e-31, Organism=Escherichia coli, GI1786980, Length=196, Percent_Identity=32.6530612244898, Blast_Score=77, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011866 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 34850; Mature: 34850
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDAVSSLPSMLPTHAMTKQARRISDSATNEPRWVQWLMILGAVLFLLAFLLLPLVLVFA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EALRGGWETFLHAVVDPDALSAIKLTLLVTAIVLPLNLVFGVAAAWAISKHQFRGKRLLV HHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLIDLPFSVSPVVAGLIFVLIFGRNGWAWPLIDEGWHVQLPALGDLVIQLPRIVFALPGI HHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEECCCCEEECCHHHHHHHHHHHHHHHHHHH VLATTFVTFPFIARELMPLMEQQGSDEELAALSLGANGWQMFWRVTLPNIRWGLLYGVLL HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHH CAARAMGEFGAVSVVSGHIRGRTNTLPLHVEILYNEYAYSAAFACASLLALTALLTLALK HHHHHHCCCCCHHHHHHCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH TYLEWRHGDSLAANHRH HHHHHHCCCCCCCCCCC >Mature Secondary Structure MNDAVSSLPSMLPTHAMTKQARRISDSATNEPRWVQWLMILGAVLFLLAFLLLPLVLVFA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EALRGGWETFLHAVVDPDALSAIKLTLLVTAIVLPLNLVFGVAAAWAISKHQFRGKRLLV HHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLIDLPFSVSPVVAGLIFVLIFGRNGWAWPLIDEGWHVQLPALGDLVIQLPRIVFALPGI HHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEECCCCEEECCHHHHHHHHHHHHHHHHHHH VLATTFVTFPFIARELMPLMEQQGSDEELAALSLGANGWQMFWRVTLPNIRWGLLYGVLL HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHH CAARAMGEFGAVSVVSGHIRGRTNTLPLHVEILYNEYAYSAAFACASLLALTALLTLALK HHHHHHCCCCCHHHHHHCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH TYLEWRHGDSLAANHRH HHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1708375 [H]