| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241774
Identifier: 21241774
GI number: 21241774
Start: 1163745
End: 1164491
Strand: Direct
Name: 21241774
Synonym: XAC1009
Alternate gene names: NA
Gene position: 1163745-1164491 (Clockwise)
Preceding gene: 21241771
Following gene: 21241777
Centisome position: 22.49
GC content: 53.55
Gene sequence:
>747_bases TTGTTAAAGCGACTGTTGTGTTTGCATGAATTGTTTGCCACATCGCGCGCTGCGGCATTGCGTATCGGTTCGGATGATCG CCTGGTGGCAAAAAACCGCCTTCCTGATAAGCGCAAATTTCATACACGCACTCGTCACGCGTGGTTGTGCTGTCGAGTGC AGTTGTGCAATTCGGTTTCGTACATCGATCAAGGGTGCGCGAGAAAGACGGGCGTCGCGGAGACGCCCTGGATGGCGAAA GTGCTAGCGTCTGAGATGCAGCGGTGTGTGTGCTGCATCACTGGCGCGTTATGCGTCATCTCCTCTGCGTATGGATACGC AGTCTTGACGCATCTCGCTGATCACGCCATCAGAAGCAGTACAGATGCTAGCTGTTGCAGCGAAAGCTATCTGCCATCAC GACGTGATGGCCGTTGTCGCATGATGTTCGGAGGGCACGTAGCGATGTTTCGAAAGCTCGTCGAGCATTCGATGCGCCAG TGGTGTGTCTTATTGCGTTGCGATCTGTTTGCGAGGTCGCATGTTCAAGAGCGCAAGAGCGCGAAGATGCTCAAGTGCAG AAGTGTCAGATACGAAAGTTTTAAGACCAATGGGTGCCAAAACGAAGTAGGCGCTGATACGCCAGGTACTGCACTCAGTG CAGCATGCACTGTCGTCAGAAACGTGCATGCACGTTGCGAAAATCTCTGTCGAAGCGATAAGACACGCGGTGTCATCGCA TCCCACAAGCGCACGCTGATGCTGTAG
Upstream 100 bases:
>100_bases AATCGCGGCTGAATGAGAGGGGTTGACGATTCCGACTGCCCGCGATGCATCGCGCTGTGAAACAGCCTAGCGTGCATCGC AACATCGAATCTGCGTCGCA
Downstream 100 bases:
>100_bases CGGCGATTGCGAATCGACAATGCAGGCAGCAAGCGGTACCTGAGCGCGTTTTAGATGCGCGAAGTGCCCGCGCGTCTACC ACACAGGCCCGTGTCGAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MLKRLLCLHELFATSRAAALRIGSDDRLVAKNRLPDKRKFHTRTRHAWLCCRVQLCNSVSYIDQGCARKTGVAETPWMAK VLASEMQRCVCCITGALCVISSAYGYAVLTHLADHAIRSSTDASCCSESYLPSRRDGRCRMMFGGHVAMFRKLVEHSMRQ WCVLLRCDLFARSHVQERKSAKMLKCRSVRYESFKTNGCQNEVGADTPGTALSAACTVVRNVHARCENLCRSDKTRGVIA SHKRTLML
Sequences:
>Translated_248_residues MLKRLLCLHELFATSRAAALRIGSDDRLVAKNRLPDKRKFHTRTRHAWLCCRVQLCNSVSYIDQGCARKTGVAETPWMAK VLASEMQRCVCCITGALCVISSAYGYAVLTHLADHAIRSSTDASCCSESYLPSRRDGRCRMMFGGHVAMFRKLVEHSMRQ WCVLLRCDLFARSHVQERKSAKMLKCRSVRYESFKTNGCQNEVGADTPGTALSAACTVVRNVHARCENLCRSDKTRGVIA SHKRTLML >Mature_248_residues MLKRLLCLHELFATSRAAALRIGSDDRLVAKNRLPDKRKFHTRTRHAWLCCRVQLCNSVSYIDQGCARKTGVAETPWMAK VLASEMQRCVCCITGALCVISSAYGYAVLTHLADHAIRSSTDASCCSESYLPSRRDGRCRMMFGGHVAMFRKLVEHSMRQ WCVLLRCDLFARSHVQERKSAKMLKCRSVRYESFKTNGCQNEVGADTPGTALSAACTVVRNVHARCENLCRSDKTRGVIA SHKRTLML
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27867; Mature: 27867
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 11.3 %Cys+Met (Translated Protein) 7.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 11.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKRLLCLHELFATSRAAALRIGSDDRLVAKNRLPDKRKFHTRTRHAWLCCRVQLCNSVS CHHHHHHHHHHHHHHHHHEEEECCCCCEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH YIDQGCARKTGVAETPWMAKVLASEMQRCVCCITGALCVISSAYGYAVLTHLADHAIRSS HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TDASCCSESYLPSRRDGRCRMMFGGHVAMFRKLVEHSMRQWCVLLRCDLFARSHVQERKS CCHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKMLKCRSVRYESFKTNGCQNEVGADTPGTALSAACTVVRNVHARCENLCRSDKTRGVIA HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH SHKRTLML HCCHHCCC >Mature Secondary Structure MLKRLLCLHELFATSRAAALRIGSDDRLVAKNRLPDKRKFHTRTRHAWLCCRVQLCNSVS CHHHHHHHHHHHHHHHHHEEEECCCCCEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH YIDQGCARKTGVAETPWMAKVLASEMQRCVCCITGALCVISSAYGYAVLTHLADHAIRSS HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TDASCCSESYLPSRRDGRCRMMFGGHVAMFRKLVEHSMRQWCVLLRCDLFARSHVQERKS CCHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKMLKCRSVRYESFKTNGCQNEVGADTPGTALSAACTVVRNVHARCENLCRSDKTRGVIA HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH SHKRTLML HCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA