| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241773
Identifier: 21241773
GI number: 21241773
Start: 1162994
End: 1163422
Strand: Reverse
Name: 21241773
Synonym: XAC1008
Alternate gene names: NA
Gene position: 1163422-1162994 (Counterclockwise)
Preceding gene: 21241775
Following gene: 21241772
Centisome position: 22.48
GC content: 63.17
Gene sequence:
>429_bases GTGTTGCCGCAGCCAGCTGCAGATTCGCTGTGTTTGAGTACGACCGTCTATCTGGAAGCGCGCGACCAGACCTTGCGTGG CCAGCAGGCCGTTGCAGAAGTTGCATTGCGTCGCCTGGATAGCGGTTTGTGGGGCGACTCGATGTGCCAGGTGGTCACTG CACGCAAGCAATTCGCGCCGACGATCGTGGCGCCAGGCACGCAGCTGAAGAACGACGATGCCTGGAACAAGGCTTTGGGC GTGGCACTGGCGGCGCAGCGCAACTGGGCATTGCCGGTTGGCCAACGCAAAGAAATCGTGCCGGGCGCCAGCCACTTTGC CGCCAGCGCAATCGCGAGCCCTAGCTGGCGTAATGCCTATCAGGTGGCCACCATCGGCGACCACACGTTCTATCGCGTGC AATCGCTGCGCCCGCGCAACGCGTCCTGA
Upstream 100 bases:
>100_bases AGCCCTCTGCACTGGTGCATCCACATTGGATGCTCTGCGGACCGGCCCATACGGAGCAAGGAGTTCTATGAAACTTGTTT GGATACTCTGGCTGTCGCAT
Downstream 100 bases:
>100_bases GCGCGGACTGTCGCGGTATCTCTGAGCGTCATACGTCGCTGAGGTCGTTGATTATCGAGATGCAGTGCCGATGCGTCTGA CGCGTCTTGATGCGCCCATC
Product: hypothetical protein
Products: NA
Alternate protein names: Cell Wall Hydrolase; Cell Wall Hydrolase Domain Protein
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MLPQPAADSLCLSTTVYLEARDQTLRGQQAVAEVALRRLDSGLWGDSMCQVVTARKQFAPTIVAPGTQLKNDDAWNKALG VALAAQRNWALPVGQRKEIVPGASHFAASAIASPSWRNAYQVATIGDHTFYRVQSLRPRNAS
Sequences:
>Translated_142_residues MLPQPAADSLCLSTTVYLEARDQTLRGQQAVAEVALRRLDSGLWGDSMCQVVTARKQFAPTIVAPGTQLKNDDAWNKALG VALAAQRNWALPVGQRKEIVPGASHFAASAIASPSWRNAYQVATIGDHTFYRVQSLRPRNAS >Mature_142_residues MLPQPAADSLCLSTTVYLEARDQTLRGQQAVAEVALRRLDSGLWGDSMCQVVTARKQFAPTIVAPGTQLKNDDAWNKALG VALAAQRNWALPVGQRKEIVPGASHFAASAIASPSWRNAYQVATIGDHTFYRVQSLRPRNAS
Specific function: Unknown
COG id: COG3773
COG function: function code M; Cell wall hydrolyses involved in spore germination
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15403; Mature: 15403
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPQPAADSLCLSTTVYLEARDQTLRGQQAVAEVALRRLDSGLWGDSMCQVVTARKQFAP CCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC TIVAPGTQLKNDDAWNKALGVALAAQRNWALPVGQRKEIVPGASHFAASAIASPSWRNAY EEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEE QVATIGDHTFYRVQSLRPRNAS EEEEECCCCEEEEECCCCCCCC >Mature Secondary Structure MLPQPAADSLCLSTTVYLEARDQTLRGQQAVAEVALRRLDSGLWGDSMCQVVTARKQFAP CCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC TIVAPGTQLKNDDAWNKALGVALAAQRNWALPVGQRKEIVPGASHFAASAIASPSWRNAY EEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEE QVATIGDHTFYRVQSLRPRNAS EEEEECCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA