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The map label for this gene is rbn [C]

Identifier: 21241707

GI number: 21241707

Start: 1099344

End: 1100612

Strand: Direct

Name: rbn [C]

Synonym: XAC0937

Alternate gene names: 21241707

Gene position: 1099344-1100612 (Clockwise)

Preceding gene: 21241704

Following gene: 21241708

Centisome position: 21.24

GC content: 65.33

Gene sequence:

>1269_bases
GTGAACAAACTCCACCAATGGAAAGAACGTCTGCGCGACCGCGCGCGGACGGTGAGCTTCGGACGCTTTCTGTGGCGCCG
CTTCCTGGACGACCGGTTGTTCCAGGCGGCCGCCTCGCTTGCATACACCACCGTGTTCGCACTGGTGCCGCTGGCGATCG
TGGTATTCGGCGTGCTGTCGGCATTTCCGGCCTTCAACGAGTGGAAGGACGCGCTCACCGACTTCATCTTCAACAATTTC
GTGCCTGGCGCGGCGCGTTCGGTGCAGAACTATCTCAACCGTTCGCTGGAGGACCTGGGCAAGTTCACCGTGGCCGGTAT
GGTCGCGCTGGTGGCCTCGCTGCTGATCACCCTGCACAGCATCGAACAAACCTTCAACAGCATCTGGCGGGTCGCCGCTG
CGCGCCCCAAGGTGACGCGCTTCCTGATCTACTGGACGGTGCTGACGCTGGGCACGATGCTGGCCGCCGCCTCGATGGCG
ATGGCGGCCTACGTGTTCGCGCTGCCGCTGTTCCGCACCACCGAAGGCCAGTGGCTGGCCGAATTCGCCTGGCGGCTGGC
GCCGATGGCGGTGGAGTTCGTGTGCATCGTGCTGATCTACCGCGTGGTGCCGCAGCACGTGGTGCGGCTGCGGCATGCGC
TGCCGGGCGCGCTGCTGGCGGTGATCCTGATGGAGATCGTCAAGTGGGGCTTTGGCTTTTACCTCGGTAATTTCCAGACC
TATCAGCGCATCTATGGCGCGCTGTCGGCATTGCCGATCCTGTTGTTGTGGATCTACCTGAGCTGGGTGTCGGTGCTGTT
GGGTGCCTCGCTGGCCTCGTCGATGTCCGCGTTCCGCTACCAGCCAGAGGCCATGCGGCTGCCGCCGGGCTTCGAGATCT
ACGGCCTGCTGCGTCTGCTCGGCCGCTTCAGCCAGGCGCGCGTCCACGGCGATGGCCTGGACGAAGATCGCATCCTGGCG
CTGGAGCCGATGCTCACCGACACGCTGATGCAGGAGCTGCTGTGCGAGCTCAAGCGTATTCGCCTGCTGCGTCGCGACGA
GCGCGGGCAGTGGCTGCTGGCGCGCGATCTGGATGTGGTGCCGCTGGCCGAACTCTACGAAAACTGCCAGCTGCGCGTGC
CGATCGAAGACCGCCCGTTGCCGTGCCGCGACGATGCATTCGGCCAGGCCGCCGCCGCGGCGCTGGAACAGCTGCGCCAA
CCCTTGCGCAGCGTGCTGGCGCAGCCGGTCGGTGACCTTTACACCCACCTTCCCGGAGATCCTCCATGA

Upstream 100 bases:

>100_bases
GAGTTGCCGCAGTATCGGCCAAGCCAGCCTGTTGCTGCACGCCGCAGCTGCGGCAAGGCCGCGATGACGGCGCATCGGGT
ACCCTTGCGCGATGTCGCGT

Downstream 100 bases:

>100_bases
CCGTGCGTCTTGTCCGCAGCGCCTGCGGGCTGCTGTTGCCACTGCTGTTGCTGACCGCCTGCAAGCCCGCCAGCGAGGCC
ACTCCCGCTGCCGGCAACGG

Product: ribonuclease BN/unknown domain fusion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MNKLHQWKERLRDRARTVSFGRFLWRRFLDDRLFQAAASLAYTTVFALVPLAIVVFGVLSAFPAFNEWKDALTDFIFNNF
VPGAARSVQNYLNRSLEDLGKFTVAGMVALVASLLITLHSIEQTFNSIWRVAAARPKVTRFLIYWTVLTLGTMLAAASMA
MAAYVFALPLFRTTEGQWLAEFAWRLAPMAVEFVCIVLIYRVVPQHVVRLRHALPGALLAVILMEIVKWGFGFYLGNFQT
YQRIYGALSALPILLLWIYLSWVSVLLGASLASSMSAFRYQPEAMRLPPGFEIYGLLRLLGRFSQARVHGDGLDEDRILA
LEPMLTDTLMQELLCELKRIRLLRRDERGQWLLARDLDVVPLAELYENCQLRVPIEDRPLPCRDDAFGQAAAAALEQLRQ
PLRSVLAQPVGDLYTHLPGDPP

Sequences:

>Translated_422_residues
MNKLHQWKERLRDRARTVSFGRFLWRRFLDDRLFQAAASLAYTTVFALVPLAIVVFGVLSAFPAFNEWKDALTDFIFNNF
VPGAARSVQNYLNRSLEDLGKFTVAGMVALVASLLITLHSIEQTFNSIWRVAAARPKVTRFLIYWTVLTLGTMLAAASMA
MAAYVFALPLFRTTEGQWLAEFAWRLAPMAVEFVCIVLIYRVVPQHVVRLRHALPGALLAVILMEIVKWGFGFYLGNFQT
YQRIYGALSALPILLLWIYLSWVSVLLGASLASSMSAFRYQPEAMRLPPGFEIYGLLRLLGRFSQARVHGDGLDEDRILA
LEPMLTDTLMQELLCELKRIRLLRRDERGQWLLARDLDVVPLAELYENCQLRVPIEDRPLPCRDDAFGQAAAAALEQLRQ
PLRSVLAQPVGDLYTHLPGDPP
>Mature_422_residues
MNKLHQWKERLRDRARTVSFGRFLWRRFLDDRLFQAAASLAYTTVFALVPLAIVVFGVLSAFPAFNEWKDALTDFIFNNF
VPGAARSVQNYLNRSLEDLGKFTVAGMVALVASLLITLHSIEQTFNSIWRVAAARPKVTRFLIYWTVLTLGTMLAAASMA
MAAYVFALPLFRTTEGQWLAEFAWRLAPMAVEFVCIVLIYRVVPQHVVRLRHALPGALLAVILMEIVKWGFGFYLGNFQT
YQRIYGALSALPILLLWIYLSWVSVLLGASLASSMSAFRYQPEAMRLPPGFEIYGLLRLLGRFSQARVHGDGLDEDRILA
LEPMLTDTLMQELLCELKRIRLLRRDERGQWLLARDLDVVPLAELYENCQLRVPIEDRPLPCRDDAFGQAAAAALEQLRQ
PLRSVLAQPVGDLYTHLPGDPP

Specific function: 3' To 5' Exoribonuclease Necessary For 3'Maturation Of tRNA Molecules. [C]

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0761 family [H]

Homologues:

Organism=Escherichia coli, GI1790319, Length=278, Percent_Identity=35.6115107913669, Blast_Score=187, Evalue=9e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 47861; Mature: 47861

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CC
>Mature Secondary Structure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CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA