| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241596
Identifier: 21241596
GI number: 21241596
Start: 986953
End: 987306
Strand: Reverse
Name: 21241596
Synonym: XAC0826
Alternate gene names: NA
Gene position: 987306-986953 (Counterclockwise)
Preceding gene: 21241597
Following gene: 21241590
Centisome position: 19.08
GC content: 59.6
Gene sequence:
>354_bases ATGCCCACCGCCCCCTTCACCGCCTACCTGTACCCGGTCCTGCTGCTGATCGCCAGCAACGTGTTCATGACCTTCGCTTG GTACGGACACCTGAAGTACAAGACCACGCCGCTGATGATCGCCATCCTGGTCAGCTGGGGCATCGCGTTCTTCGAATACT GCCTGCAGGTGCCTGGCAACCGTCTGGGCAGCGCGGTGTATTCGGCGCCGCAGCTCAAGGGCATGCAGGAAGTGATCACG CTGCTGGTCTTTGCCGGTTTCTCCACCTTCTACCTGGGGCAGTCGCTGAAGTGGAACCATTGGGCTGCGTTCGGCCTGAT CCTGGTGGCGGCGTTTTTGATGTTCAAGGAATAA
Upstream 100 bases:
>100_bases CGCTGGGGCATGCAGCGCTAGAGCGGCCTCGGCGGTGCGGTCGCGTGCGCTTAACGAGGTTGGCTTATGCTTCGGCCCCC ATTCTCTGCCGCTCGCCGCC
Downstream 100 bases:
>100_bases AGGCAAAGCGCCGTCTCGCTCGTAGGAGCGCAGCCGGGCGCGACCTCGCAAAGCCTCCCGCGGCGCGATGGGCCTTATCG GGAATGCCATGTCGCGACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MPTAPFTAYLYPVLLLIASNVFMTFAWYGHLKYKTTPLMIAILVSWGIAFFEYCLQVPGNRLGSAVYSAPQLKGMQEVIT LLVFAGFSTFYLGQSLKWNHWAAFGLILVAAFLMFKE
Sequences:
>Translated_117_residues MPTAPFTAYLYPVLLLIASNVFMTFAWYGHLKYKTTPLMIAILVSWGIAFFEYCLQVPGNRLGSAVYSAPQLKGMQEVIT LLVFAGFSTFYLGQSLKWNHWAAFGLILVAAFLMFKE >Mature_116_residues PTAPFTAYLYPVLLLIASNVFMTFAWYGHLKYKTTPLMIAILVSWGIAFFEYCLQVPGNRLGSAVYSAPQLKGMQEVITL LVFAGFSTFYLGQSLKWNHWAAFGLILVAAFLMFKE
Specific function: Unknown
COG id: COG3169
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13186; Mature: 13055
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTAPFTAYLYPVLLLIASNVFMTFAWYGHLKYKTTPLMIAILVSWGIAFFEYCLQVPGN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEECCHHHHHHHHHHHHHHHHHHHHHCCCC RLGSAVYSAPQLKGMQEVITLLVFAGFSTFYLGQSLKWNHWAAFGLILVAAFLMFKE HHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PTAPFTAYLYPVLLLIASNVFMTFAWYGHLKYKTTPLMIAILVSWGIAFFEYCLQVPGN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEECCHHHHHHHHHHHHHHHHHHHHHCCCC RLGSAVYSAPQLKGMQEVITLLVFAGFSTFYLGQSLKWNHWAAFGLILVAAFLMFKE HHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA